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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 9BXQ | 45008 | 2025-01-14 | 2024-05-22 | 3.1 | 3.01 | 2.97 | 3.2 | 0.011 | 1.84 | 0.0 | 0.09 | 10.87 | 0.01 | 1.454 | 27.94 | 0.00 | 6.7 | 93.3 | 0.0 | -2.37 | 0.30 | 0.68 | 3.66 | 3.2 | 0.004 | 0.65 | 0.0 | 0.05 | 13.40 | 0.00 | 2.489 | 3.91 | 0.25 | 6.4 | 93.6 | 0.0 | -2.97 | 1.24 | 0.35 | 0.78 | 4.99 | 7182 | 462 | 6 | 0 | 0 | 0 | 3654 | logfile |
✔ | 9BXQ | 45008 | 2025-02-12 | 2024-05-22 | 3.1 | 3.01 | 2.97 | 3.2 | 0.011 | 1.84 | 0.0 | 0.09 | 10.87 | 0.01 | 1.454 | 27.94 | 0.00 | 6.7 | 93.3 | 0.0 | -2.37 | 0.30 | 0.68 | 3.66 | 3.2 | 0.004 | 0.65 | 0.0 | 0.05 | 13.40 | 0.00 | 2.489 | 3.91 | 0.25 | 6.4 | 93.6 | 0.0 | -2.97 | 1.24 | 0.35 | 0.78 | 4.99 | 7182 | 462 | 6 | 0 | 0 | 0 | 3654 | logfile |
✔ | 9BXQ | 45008 | 2025-03-12 | 2024-05-22 | 3.1 | 3.01 | 2.96 | 3.2 | 0.011 | 1.84 | 0.0 | 0.09 | 10.87 | 0.01 | 1.454 | 27.94 | 0.00 | 6.7 | 93.3 | 0.0 | -2.37 | 0.30 | 0.68 | 3.66 | 3.2 | 0.003 | 0.60 | 0.0 | 0.05 | 13.43 | 0.00 | 2.481 | 3.35 | 0.00 | 4.2 | 95.8 | 0.0 | -2.83 | 1.24 | 0.34 | 0.78 | 4.76 | 7182 | 462 | 6 | 0 | 0 | 0 | 3654 | logfile |
✔ | 9BXR | 45009 | 2025-03-12 | 2024-05-22 | 3.2 | 2.90 | 3.15 | 3.3 | 0.011 | 1.87 | 0.0 | 0.09 | 11.16 | 0.01 | 0.991 | 32.81 | 0.00 | 6.7 | 92.0 | 1.3 | -2.61 | 0.36 | 0.73 | 3.45 | 3.1 | 0.002 | 0.60 | 0.0 | 0.05 | 15.26 | 0.00 | 2.415 | 2.51 | 1.00 | 6.7 | 93.3 | 0.0 | -2.51 | 1.24 | 0.38 | 0.78 | 2.49 | 7184 | 462 | 6 | 0 | 0 | 0 | 3656 | logfile |
✔ | 9BXR | 45009 | 2025-04-28 | 2024-05-22 | 3.2 | 2.90 | 3.15 | 3.3 | 0.011 | 1.87 | 0.0 | 0.09 | 11.16 | 0.01 | 0.991 | 32.81 | 0.00 | 6.7 | 92.0 | 1.3 | -2.61 | 0.36 | 0.73 | 3.45 | 3.1 | 0.002 | 0.60 | 0.0 | 0.05 | 15.26 | 0.00 | 2.415 | 2.51 | 1.00 | 6.7 | 93.3 | 0.0 | -2.51 | 1.24 | 0.38 | 0.78 | 2.49 | 7184 | 462 | 6 | 0 | 0 | 0 | 3656 | logfile |
✔ | 9BXR | 45009 | 2025-05-11 | 2024-05-22 | 3.2 | 2.90 | 3.15 | 3.3 | 0.011 | 1.87 | 0.0 | 0.09 | 11.16 | 0.01 | 0.991 | 32.81 | 0.00 | 6.7 | 92.0 | 1.3 | -2.61 | 0.36 | 0.73 | 3.45 | 3.1 | 0.003 | 0.65 | 0.0 | 0.05 | 15.11 | 0.00 | 2.402 | 2.51 | 1.99 | 6.4 | 93.6 | 0.0 | -2.70 | 1.26 | 0.38 | 0.78 | 2.64 | 7184 | 462 | 6 | 0 | 0 | 0 | 3656 | logfile |
✔ | 9BXR | 45009 | 2025-06-06 | 2024-05-22 | 3.2 | 2.90 | 3.15 | 3.3 | 0.011 | 1.87 | 0.0 | 0.09 | 11.16 | 0.01 | 0.991 | 32.81 | 0.00 | 6.7 | 92.0 | 1.3 | -2.61 | 0.36 | 0.73 | 3.45 | 3.1 | 0.002 | 0.60 | 0.0 | 0.05 | 15.26 | 0.00 | 2.415 | 2.51 | 1.00 | 6.7 | 93.3 | 0.0 | -2.51 | 1.24 | 0.38 | 0.78 | 2.49 | 7184 | 462 | 6 | 0 | 0 | 0 | 3656 | logfile |
✔ | 9BXR | 45009 | 2024-09-24 | 2024-05-22 | 3.2 | 2.90 | 3.18 | 3.3 | 0.011 | 1.87 | 0.0 | 0.09 | 11.16 | 0.01 | 0.991 | 32.81 | 0.00 | 6.7 | 92.0 | 1.3 | -2.61 | 0.36 | 0.73 | 3.45 | 3.1 | 0.003 | 0.65 | 0.0 | 0.05 | 14.97 | 0.00 | 2.401 | 2.79 | 1.49 | 7.8 | 92.2 | 0.0 | -2.71 | 1.27 | 0.38 | 0.78 | 2.73 | 7184 | 462 | 6 | 0 | 0 | 0 | 3656 | logfile |
✔ | 9BXR | 45009 | 2025-02-12 | 2024-05-22 | 3.2 | 2.90 | 3.18 | 3.3 | 0.011 | 1.87 | 0.0 | 0.09 | 11.16 | 0.01 | 0.991 | 32.81 | 0.00 | 6.7 | 92.0 | 1.3 | -2.61 | 0.36 | 0.73 | 3.45 | 3.1 | 0.003 | 0.65 | 0.0 | 0.05 | 15.11 | 0.00 | 2.402 | 2.51 | 1.99 | 6.4 | 93.6 | 0.0 | -2.70 | 1.26 | 0.38 | 0.78 | 2.64 | 7184 | 462 | 6 | 0 | 0 | 0 | 3656 | logfile |
✔ | 9BXR | 45009 | 2024-10-10 | 2024-05-22 | 3.2 | 2.90 | 3.18 | 3.3 | 0.011 | 1.87 | 0.0 | 0.09 | 11.16 | 0.01 | 0.991 | 32.81 | 0.00 | 6.7 | 92.0 | 1.3 | -2.61 | 0.36 | 0.73 | 3.45 | 3.1 | 0.003 | 0.65 | 0.0 | 0.05 | 14.97 | 0.00 | 2.401 | 2.79 | 1.49 | 7.8 | 92.2 | 0.0 | -2.71 | 1.27 | 0.38 | 0.78 | 2.73 | 7184 | 462 | 6 | 0 | 0 | 0 | 3656 | logfile |
✔ | 9BXR | 45009 | 2025-01-14 | 2024-05-22 | 3.2 | 2.90 | 3.18 | 3.3 | 0.011 | 1.87 | 0.0 | 0.09 | 11.16 | 0.01 | 0.991 | 32.81 | 0.00 | 6.7 | 92.0 | 1.3 | -2.61 | 0.36 | 0.73 | 3.45 | 3.1 | 0.003 | 0.65 | 0.0 | 0.05 | 15.11 | 0.00 | 2.402 | 2.51 | 1.99 | 6.4 | 93.6 | 0.0 | -2.70 | 1.26 | 0.38 | 0.78 | 2.64 | 7184 | 462 | 6 | 0 | 0 | 0 | 3656 | logfile |
✔ | 9BXR | 45009 | 2024-12-28 | 2024-05-22 | 3.2 | 2.90 | 3.18 | 3.3 | 0.011 | 1.87 | 0.0 | 0.09 | 11.16 | 0.01 | 0.991 | 32.81 | 0.00 | 6.7 | 92.0 | 1.3 | -2.61 | 0.36 | 0.73 | 3.45 | 3.1 | 0.003 | 0.65 | 0.0 | 0.05 | 14.97 | 0.00 | 2.401 | 2.79 | 1.49 | 7.8 | 92.2 | 0.0 | -2.71 | 1.27 | 0.38 | 0.78 | 2.73 | 7184 | 462 | 6 | 0 | 0 | 0 | 3656 | logfile |
✔ | 9BXR | 45009 | 2024-11-14 | 2024-05-22 | 3.2 | 2.90 | 3.18 | 3.3 | 0.011 | 1.87 | 0.0 | 0.09 | 11.16 | 0.01 | 0.991 | 32.81 | 0.00 | 6.7 | 92.0 | 1.3 | -2.61 | 0.36 | 0.73 | 3.45 | 3.1 | 0.003 | 0.65 | 0.0 | 0.05 | 14.97 | 0.00 | 2.401 | 2.79 | 1.49 | 7.8 | 92.2 | 0.0 | -2.71 | 1.27 | 0.38 | 0.78 | 2.73 | 7184 | 462 | 6 | 0 | 0 | 0 | 3656 | logfile |
✔ | 9BXS | 45010 | 2025-05-18 | 2024-05-22 | 3.37 | 3.77 | 3.03 | 3.5 | 0.008 | 0.83 | 3.0 | 0.06 | 17.55 | 0.00 | 1.912 | 9.35 | 1.34 | 2.1 | 97.9 | 0.0 | 0.58 | 0.68 | 0.67 | 2.67 | 3.5 | 0.005 | 0.72 | 0.0 | 0.05 | 17.88 | 0.00 | 1.833 | 11.39 | 2.74 | 2.6 | 97.4 | 0.0 | 0.94 | 1.64 | 0.69 | 0.81 | 2.60 | 16678 | 2026 | 9 | 2 | 10 | 0 | 0 | logfile |
✔ | 9BWX | 44985 | 2025-05-17 | 2024-05-22 | 2.91 | 3.39 | 2.62 | 3.1 | 0.008 | 0.71 | 3.0 | 0.06 | 17.18 | 0.00 | 1.912 | 16.99 | 1.34 | 1.6 | 98.4 | 0.0 | 1.09 | 0.71 | 0.72 | 3.67 | 3.1 | 0.003 | 0.62 | 0.0 | 0.04 | 17.47 | 0.00 | 2.007 | 8.22 | 1.75 | 1.5 | 98.5 | 0.0 | 1.68 | 1.91 | 0.69 | 0.84 | 3.26 | 15954 | 1940 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 9BX3 | 44992 | 2025-05-17 | 2024-05-22 | 3.9 | 3.76 | 3.33 | 3.6 | 0.008 | 0.71 | 3.0 | 0.06 | 17.18 | 0.00 | 1.912 | 17.02 | 1.34 | 1.6 | 98.4 | 0.0 | 1.09 | 0.68 | 0.66 | 2.16 | 3.6 | 0.004 | 0.79 | 0.0 | 0.05 | 17.90 | 0.00 | 1.965 | 15.40 | 2.10 | 2.0 | 98.0 | 0.0 | 0.57 | 2.74 | 0.70 | 0.78 | 1.57 | 15954 | 1940 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 9BX3 | 44992 | 2025-06-14 | 2024-05-22 | 3.9 | 3.76 | 3.33 | 3.6 | 0.008 | 0.71 | 3.0 | 0.06 | 17.18 | 0.00 | 1.912 | 17.02 | 1.34 | 1.6 | 98.4 | 0.0 | 1.09 | 0.68 | 0.66 | 2.16 | 3.6 | 0.005 | 0.81 | 0.0 | 0.05 | 17.78 | 0.00 | 1.844 | 16.83 | 2.57 | 2.2 | 97.8 | 0.0 | 0.51 | 2.74 | 0.71 | 0.78 | 1.61 | 15954 | 1940 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 9BX9 | 45000 | 2025-05-17 | 2024-05-22 | 3.79 | 3.73 | 3.26 | 3.5 | 0.008 | 0.71 | 3.0 | 0.06 | 17.18 | 0.00 | 1.911 | 17.14 | 1.40 | 1.6 | 98.4 | 0.0 | 1.09 | 0.68 | 0.67 | 2.65 | 3.5 | 0.003 | 0.72 | 0.0 | 0.04 | 17.56 | 0.00 | 1.928 | 11.91 | 1.98 | 2.2 | 97.8 | 0.0 | 1.16 | 1.39 | 0.71 | 0.80 | 2.32 | 15954 | 1940 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 9BX9 | 45000 | 2025-06-14 | 2024-05-22 | 3.79 | 3.73 | 3.26 | 3.5 | 0.008 | 0.71 | 3.0 | 0.06 | 17.18 | 0.00 | 1.911 | 17.14 | 1.40 | 1.6 | 98.4 | 0.0 | 1.09 | 0.68 | 0.67 | 2.65 | 3.5 | 0.003 | 0.70 | 0.0 | 0.04 | 17.52 | 0.00 | 1.897 | 11.87 | 1.98 | 2.3 | 97.7 | 0.0 | 1.03 | 1.40 | 0.71 | 0.80 | 2.35 | 15954 | 1940 | 8 | 0 | 10 | 0 | 0 | logfile |
✔ | 9BX6 | 44995 | 2025-06-14 | 2024-05-22 | 3.44 | 3.61 | 3.02 | 3.4 | 0.008 | 0.71 | 3.0 | 0.06 | 17.18 | 0.00 | 1.911 | 17.14 | 1.40 | 1.6 | 98.4 | 0.0 | 1.10 | 0.70 | 0.72 | 3.32 | 3.4 | 0.005 | 0.73 | 0.0 | 0.05 | 17.97 | 0.00 | 1.889 | 11.62 | 2.16 | 1.9 | 98.1 | 0.0 | 1.05 | 1.42 | 0.70 | 0.83 | 2.95 | 15954 | 1940 | 8 | 0 | 10 | 0 | 0 | logfile |