Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8YJH	39342	2025-02-14	2024-03-01	3.68	3.64	3.65	3.7	0.005	1.04	0.0	0.06	18.97	0.01	2.256	4.67	0.00	5.2	94.8	0.0	-3.68	0.80	0.78	2.04	3.7	0.003	0.64	0.0	0.04	19.75	0.00	2.493	11.71	1.86	3.4	96.6	0.0	-1.10	0.47	0.81	0.81	1.76	9735	1115	8	53	0	0	0	logfile
✔	8YJH	39342	2025-04-30	2024-03-01	3.68	3.64	3.66	3.7	0.005	1.04	0.0	0.06	18.97	0.01	2.256	4.67	0.00	5.2	94.8	0.0	-3.68	0.80	0.78	2.04	3.7	0.004	0.66	0.0	0.04	19.72	0.00	2.489	12.70	2.27	3.7	96.3	0.0	-1.16	0.95	0.82	0.81	1.63	9735	1115	8	53	0	0	0	logfile
✔	8YJH	39342	2024-12-29	2024-03-01	3.68	3.64	3.65	3.7	0.005	1.04	0.0	0.06	18.97	0.01	2.256	4.67	0.00	5.2	94.8	0.0	-3.68	0.80	0.78	2.04	3.7	0.004	0.69	0.0	0.04	19.72	0.00	2.485	13.23	1.65	4.0	96.0	0.0	-1.05	1.26	0.82	0.81	1.78	9735	1115	8	53	0	0	0	logfile
✔	8S7E	19768	2025-02-12	2024-02-29	3.4	3.72	3.45	3.6	0.003	0.55	0.0	0.04	18.59	0.00	1.902	20.70	0.25	7.8	92.2	0.0	-1.51	0.59	0.55	0.28	3.6	0.003	0.60	0.0	0.05	18.95	0.00	2.378	13.21	2.96	5.6	94.4	0.0	-1.24	0.47	0.58	0.56	-0.12	7312	466	2	0	0	0	3648	logfile
✔	8S7E	19768	2024-12-28	2024-02-29	3.4	3.72	3.45	3.6	0.003	0.55	0.0	0.04	18.59	0.00	1.902	20.70	0.25	7.8	92.2	0.0	-1.51	0.59	0.55	0.28	3.6	0.002	0.58	0.0	0.04	18.84	0.00	2.361	12.53	2.47	6.2	93.8	0.0	-1.03	0.44	0.57	0.56	0.05	7312	466	2	0	0	0	3648	logfile
✔	8S7E	19768	2025-04-28	2024-02-29	3.4	3.72	3.43	3.6	0.003	0.55	0.0	0.04	18.59	0.00	1.902	20.70	0.25	7.8	92.2	0.0	-1.51	0.59	0.55	0.28	3.6	0.003	0.59	0.0	0.05	18.95	0.00	2.374	12.66	2.96	6.0	94.0	0.0	-1.23	0.46	0.58	0.56	-0.16	7312	466	2	0	0	0	3648	logfile
✔	8S7E	19768	2025-03-12	2024-02-29	3.4	3.72	3.43	3.6	0.003	0.55	0.0	0.04	18.59	0.00	1.902	20.70	0.25	7.8	92.2	0.0	-1.51	0.59	0.55	0.28	3.6	0.003	0.59	0.0	0.05	18.95	0.00	2.374	12.66	2.96	6.0	94.0	0.0	-1.23	0.46	0.58	0.56	-0.16	7312	466	2	0	0	0	3648	logfile
✔	8S7E	19768	2025-01-14	2024-02-29	3.4	3.72	3.45	3.6	0.003	0.55	0.0	0.04	18.59	0.00	1.902	20.70	0.25	7.8	92.2	0.0	-1.51	0.59	0.55	0.28	3.6	0.003	0.60	0.0	0.05	18.95	0.00	2.378	13.21	2.96	5.6	94.4	0.0	-1.24	0.47	0.58	0.56	-0.12	7312	466	2	0	0	0	3648	logfile
✔	8S7D	19766	2025-02-11	2024-02-29	3.2	3.46	3.22	3.5	0.003	0.57	0.0	0.04	19.45	0.00	2.090	13.28	4.70	3.5	96.5	0.0	-0.33	0.55	0.71	1.65	3.5	0.004	0.62	0.0	0.04	19.18	0.00	2.468	13.00	4.86	4.8	95.2	0.0	-0.46	0.33	0.59	0.72	1.99	5488	691	4	0	0	0	0	logfile
✔	8S7D	19766	2025-04-27	2024-02-29	3.2	3.46	3.22	3.5	0.003	0.57	0.0	0.04	19.45	0.00	2.090	13.28	4.70	3.5	96.5	0.0	-0.33	0.55	0.71	1.65	3.5	0.003	0.60	0.0	0.04	19.17	0.00	2.219	12.18	4.21	3.8	96.2	0.0	-0.16	0.33	0.58	0.71	1.78	5488	691	4	0	0	0	0	logfile
✔	8S7D	19766	2025-03-06	2024-02-29	3.2	3.46	3.22	3.5	0.003	0.57	0.0	0.04	19.45	0.00	2.090	13.28	4.70	3.5	96.5	0.0	-0.33	0.55	0.71	1.65	3.5	0.003	0.60	0.0	0.04	19.17	0.00	2.219	12.18	4.21	3.8	96.2	0.0	-0.16	0.33	0.58	0.71	1.78	5488	691	4	0	0	0	0	logfile
✔	8S7D	19766	2025-01-14	2024-02-29	3.2	3.46	3.22	3.5	0.003	0.57	0.0	0.04	19.45	0.00	2.090	13.28	4.70	3.5	96.5	0.0	-0.33	0.55	0.71	1.65	3.5	0.004	0.62	0.0	0.04	19.18	0.00	2.468	13.00	4.86	4.8	95.2	0.0	-0.46	0.33	0.59	0.72	1.99	5488	691	4	0	0	0	0	logfile
✔	8S7D	19766	2024-12-27	2024-02-29	3.2	3.46	3.22	3.5	0.003	0.57	0.0	0.04	19.45	0.00	2.090	13.28	4.70	3.5	96.5	0.0	-0.33	0.55	0.71	1.65	3.5	0.003	0.59	0.0	0.04	19.17	0.00	2.431	11.46	4.05	3.8	96.2	0.0	-0.17	0.35	0.58	0.71	1.87	5488	691	4	0	0	0	0	logfile
✔	8Yi7	39311	2024-10-09	2024-02-29	3.57	3.79	3.54	3.8	0.013	1.60	4.0	0.11	13.65	0.00	2.122	9.97	1.75	4.2	95.8	0.0	0.53	0.67	0.77	2.41	3.7	0.003	0.60	0.0	0.04	14.96	0.00	2.476	5.53	1.75	2.6	97.4	0.0	0.30	1.48	0.71	0.84	1.91	5586	697	6	0	4	0	0	logfile
✔	8Yi7	39311	2025-03-06	2024-02-29	3.57	3.79	3.53	3.8	0.013	1.60	4.0	0.11	13.65	0.00	2.122	9.97	1.75	4.2	95.8	0.0	0.53	0.67	0.77	2.41	3.7	0.003	0.62	0.0	0.04	15.07	0.00	2.513	5.35	2.86	2.6	97.4	0.0	0.38	1.48	0.71	0.84	2.04	5586	697	6	0	4	0	0	logfile
✔	8Yi7	39311	2025-04-27	2024-02-29	3.57	3.79	3.53	3.8	0.013	1.64	4.0	0.11	13.65	0.00	2.122	9.97	1.75	4.2	95.8	0.0	0.53	0.67	0.77	2.41	3.8	0.003	0.64	0.0	0.04	14.86	0.00	2.491	6.16	2.23	2.6	97.4	0.0	0.47	1.19	0.71	0.84	1.97	5586	697	6	0	4	0	0	logfile
✔	8Yi7	39311	2024-08-02	2024-02-29	3.57	3.79	3.54	3.8	0.013	1.60	4.0	0.11	13.65	0.00	2.122	9.97	1.75	4.2	95.8	0.0	0.53	0.67	0.77	2.41	3.7	0.003	0.60	0.0	0.04	14.96	0.00	2.476	5.53	1.75	2.6	97.4	0.0	0.30	1.48	0.71	0.84	1.91	5586	697	6	0	4	0	0	logfile
✔	9AUF	43878	2025-02-12	2024-02-29	2.73	2.96	2.74	3.0	0.005	0.73	0.0	0.05	21.70	0.01	2.331	3.00	0.57	2.9	97.1	0.0	-0.18	0.72	0.88	5.39	3.0	0.006	0.64	0.0	0.05	22.02	0.01	2.244	4.98	3.69	3.4	96.6	0.0	0.96	0.87	0.72	0.88	5.00	7251	389	5	192	0	0	0	logfile
✔	9AUF	43878	2025-03-12	2024-02-29	2.73	2.96	2.73	3.0	0.005	0.73	0.0	0.05	21.70	0.01	2.331	3.00	0.57	2.9	97.1	0.0	-0.18	0.72	0.88	5.39	3.0	0.004	0.57	0.0	0.04	21.92	0.00	2.361	6.08	3.69	2.6	97.4	0.0	1.23	0.87	0.72	0.88	4.93	7251	389	5	192	0	0	0	logfile
✔	8Yi7	39311	2025-01-14	2024-02-29	3.57	3.79	3.54	3.8	0.013	1.60	4.0	0.11	13.65	0.00	2.122	9.97	1.75	4.2	95.8	0.0	0.53	0.67	0.77	2.41	3.7	0.003	0.62	0.0	0.04	14.96	0.00	2.513	5.80	2.23	2.9	97.1	0.0	0.27	1.48	0.71	0.84	2.00	5586	697	6	0	4	0	0	logfile

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