The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 9BBM | 44422 | 2025-04-28 | 2024-04-06 | 3.2 | 3.01 | 3.09 | 3.2 | 0.012 | 2.05 | 4.0 | 0.11 | 13.73 | 0.01 | 2.513 | 0.00 | 0.51 | 12.7 | 82.4 | 4.9 | -3.91 | 0.33 | 0.62 | 3.86 | 3.2 | 0.003 | 0.65 | 0.0 | 0.05 | 16.37 | 0.00 | 2.381 | 6.03 | 1.28 | 10.4 | 88.7 | 0.9 | -3.28 | 1.33 | 0.34 | 0.73 | 3.99 | 6966 | 444 | 6 | 0 | 0 | 0 | 3558 | logfile |
✔ | 9BBM | 44422 | 2024-12-27 | 2024-04-06 | 3.2 | 3.01 | 3.08 | 3.2 | 0.012 | 2.05 | 4.0 | 0.11 | 13.73 | 0.01 | 2.513 | 0.00 | 0.51 | 12.7 | 82.4 | 4.9 | -3.91 | 0.33 | 0.62 | 3.86 | 3.2 | 0.003 | 0.67 | 0.0 | 0.05 | 16.37 | 0.00 | 2.383 | 6.18 | 1.28 | 10.4 | 88.7 | 0.9 | -3.22 | 1.30 | 0.35 | 0.73 | 4.15 | 6966 | 444 | 6 | 0 | 0 | 0 | 3558 | logfile |
✔ | 9BBM | 44422 | 2025-05-10 | 2024-04-06 | 3.2 | 3.01 | 3.09 | 3.2 | 0.012 | 2.05 | 4.0 | 0.11 | 13.73 | 0.01 | 2.513 | 0.00 | 0.51 | 12.7 | 82.4 | 4.9 | -3.91 | 0.33 | 0.62 | 3.86 | 3.2 | 0.003 | 0.67 | 0.0 | 0.05 | 16.57 | 0.00 | 2.378 | 5.75 | 1.03 | 9.5 | 89.6 | 0.9 | -3.34 | 1.32 | 0.35 | 0.73 | 4.18 | 6966 | 444 | 6 | 0 | 0 | 0 | 3558 | logfile |
✔ | 9BBM | 44422 | 2024-11-14 | 2024-04-06 | 3.2 | 3.01 | 3.08 | 3.2 | 0.012 | 2.05 | 4.0 | 0.11 | 13.73 | 0.01 | 2.513 | 0.00 | 0.51 | 12.7 | 82.4 | 4.9 | -3.91 | 0.33 | 0.62 | 3.86 | 3.2 | 0.003 | 0.67 | 0.0 | 0.05 | 16.37 | 0.00 | 2.383 | 6.18 | 1.28 | 10.4 | 88.7 | 0.9 | -3.22 | 1.30 | 0.35 | 0.73 | 4.15 | 6966 | 444 | 6 | 0 | 0 | 0 | 3558 | logfile |
✔ | 9BBM | 44422 | 2024-10-10 | 2024-04-06 | 3.2 | 3.01 | 3.08 | 3.2 | 0.012 | 2.05 | 4.0 | 0.11 | 13.73 | 0.01 | 2.513 | 0.00 | 0.51 | 12.7 | 82.4 | 4.9 | -3.91 | 0.33 | 0.62 | 3.86 | 3.2 | 0.003 | 0.67 | 0.0 | 0.05 | 16.37 | 0.00 | 2.383 | 6.18 | 1.28 | 10.4 | 88.7 | 0.9 | -3.22 | 1.30 | 0.35 | 0.73 | 4.15 | 6966 | 444 | 6 | 0 | 0 | 0 | 3558 | logfile |
✔ | 9BAZ | 44415 | 2025-01-15 | 2024-04-05 | 2.76 | 3.45 | 2.80 | 3.3 | 0.004 | 0.63 | 0.0 | 0.04 | 16.56 | 0.00 | 2.117 | 12.04 | 0.50 | 3.2 | 96.8 | 0.0 | 0.19 | 0.71 | 0.71 | 2.69 | 3.3 | 0.004 | 0.67 | 0.0 | 0.04 | 16.88 | 0.00 | 2.426 | 9.84 | 4.15 | 3.6 | 96.4 | 0.0 | 0.19 | 0.29 | 0.72 | 0.72 | 2.60 | 8283 | 1090 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 9BBC | 44417 | 2024-11-15 | 2024-04-05 | 3.3 | 4.25 | 3.36 | 3.7 | 0.003 | 0.92 | 0.0 | 0.05 | 15.19 | 0.00 | 2.206 | 13.57 | 0.56 | 3.7 | 96.2 | 0.1 | 0.51 | 0.81 | 0.82 | 2.28 | 3.8 | 0.005 | 0.89 | 0.0 | 0.05 | 15.65 | 0.00 | 2.436 | 13.27 | 3.60 | 5.1 | 94.9 | 0.0 | 0.08 | 1.19 | 0.82 | 0.84 | 2.05 | 8440 | 1052 | 16 | 0 | 20 | 0 | 0 | logfile |
✔ | 9BBC | 44417 | 2024-10-10 | 2024-04-05 | 3.3 | 4.25 | 3.36 | 3.7 | 0.003 | 0.92 | 0.0 | 0.05 | 15.19 | 0.00 | 2.206 | 13.57 | 0.56 | 3.7 | 96.2 | 0.1 | 0.51 | 0.81 | 0.82 | 2.28 | 3.8 | 0.005 | 0.89 | 0.0 | 0.05 | 15.65 | 0.00 | 2.436 | 13.27 | 3.60 | 5.1 | 94.9 | 0.0 | 0.08 | 1.19 | 0.82 | 0.84 | 2.05 | 8440 | 1052 | 16 | 0 | 20 | 0 | 0 | logfile |
✔ | 9BBC | 44417 | 2024-12-28 | 2024-04-05 | 3.3 | 4.25 | 3.36 | 3.7 | 0.003 | 0.92 | 0.0 | 0.05 | 15.19 | 0.00 | 2.206 | 13.57 | 0.56 | 3.7 | 96.2 | 0.1 | 0.51 | 0.81 | 0.82 | 2.28 | 3.8 | 0.005 | 0.89 | 0.0 | 0.05 | 15.65 | 0.00 | 2.436 | 13.27 | 3.60 | 5.1 | 94.9 | 0.0 | 0.08 | 1.19 | 0.82 | 0.84 | 2.05 | 8440 | 1052 | 16 | 0 | 20 | 0 | 0 | logfile |
✔ | 9BAZ | 44415 | 2025-03-13 | 2024-04-05 | 2.76 | 3.45 | 2.80 | 3.3 | 0.004 | 0.63 | 0.0 | 0.04 | 16.56 | 0.00 | 2.117 | 12.04 | 0.50 | 3.2 | 96.8 | 0.0 | 0.19 | 0.71 | 0.71 | 2.69 | 3.3 | 0.003 | 0.66 | 0.0 | 0.04 | 16.86 | 0.00 | 2.417 | 9.47 | 3.02 | 3.4 | 96.6 | 0.0 | 0.19 | 0.29 | 0.71 | 0.72 | 2.38 | 8283 | 1090 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 9BAZ | 44415 | 2025-02-12 | 2024-04-05 | 2.76 | 3.45 | 2.80 | 3.3 | 0.004 | 0.63 | 0.0 | 0.04 | 16.56 | 0.00 | 2.117 | 12.04 | 0.50 | 3.2 | 96.8 | 0.0 | 0.19 | 0.71 | 0.71 | 2.69 | 3.3 | 0.004 | 0.67 | 0.0 | 0.04 | 16.88 | 0.00 | 2.426 | 9.84 | 4.15 | 3.6 | 96.4 | 0.0 | 0.19 | 0.29 | 0.72 | 0.72 | 2.60 | 8283 | 1090 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 9BAZ | 44415 | 2025-04-29 | 2024-04-05 | 2.76 | 3.45 | 2.80 | 3.3 | 0.004 | 0.68 | 0.0 | 0.04 | 16.56 | 0.00 | 2.117 | 12.04 | 0.50 | 3.2 | 96.8 | 0.0 | 0.19 | 0.71 | 0.71 | 2.69 | 3.3 | 0.003 | 0.64 | 0.0 | 0.04 | 16.86 | 0.00 | 2.432 | 9.09 | 2.89 | 3.5 | 96.5 | 0.0 | 0.21 | 0.28 | 0.71 | 0.71 | 2.38 | 8283 | 1090 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 9EWX | 50025 | 2024-09-29 | 2024-04-05 | 3.17 | 2.84 | 3.08 | 3.0 | 0.002 | 0.42 | 0.0 | 0.04 | 17.57 | 0.00 | 2.031 | 3.78 | 0.88 | 0.7 | 99.3 | 0.0 | 2.80 | 0.68 | 0.88 | 2.05 | 3.0 | 0.004 | 0.54 | 0.0 | 0.05 | 16.75 | 0.00 | 2.540 | 5.78 | 4.31 | 2.4 | 97.6 | 0.0 | 2.71 | 0.96 | 0.68 | 0.89 | 1.78 | 23989 | 3289 | 23 | 0 | 0 | 0 | 0 | logfile |
✔ | 9EWX | 50025 | 2025-05-23 | 2024-04-05 | 3.17 | 2.84 | 3.08 | 3.1 | 0.002 | 0.42 | 0.0 | 0.04 | 17.57 | 0.00 | 2.318 | 3.78 | 0.88 | 0.7 | 99.3 | 0.0 | 2.80 | 0.68 | 0.88 | 2.05 | 3.0 | 0.002 | 0.49 | 0.0 | 0.05 | 16.67 | 0.00 | 2.549 | 5.54 | 3.77 | 1.3 | 98.7 | 0.0 | 2.77 | 0.49 | 0.68 | 0.89 | 1.90 | 23989 | 3289 | 23 | 0 | 0 | 0 | 0 | logfile |
✔ | 9EWX | 50025 | 2025-01-25 | 2024-04-05 | 3.17 | 2.84 | 3.08 | 3.0 | 0.002 | 0.42 | 0.0 | 0.04 | 17.57 | 0.00 | 2.031 | 3.78 | 0.88 | 0.7 | 99.3 | 0.0 | 2.80 | 0.68 | 0.88 | 2.05 | 3.0 | 0.004 | 0.56 | 0.0 | 0.05 | 16.82 | 0.00 | 2.541 | 5.51 | 2.92 | 2.7 | 97.3 | 0.0 | 2.50 | 0.96 | 0.68 | 0.89 | 1.85 | 23989 | 3289 | 23 | 0 | 0 | 0 | 0 | logfile |
✔ | 9EWX | 50025 | 2024-08-08 | 2024-04-05 | 3.17 | 2.84 | 3.08 | 3.0 | 0.002 | 0.42 | 0.0 | 0.04 | 17.57 | 0.00 | 2.318 | 3.78 | 0.88 | 0.7 | 99.3 | 0.0 | 2.80 | 0.68 | 0.88 | 2.05 | 3.0 | 0.005 | 0.85 | 2.0 | 0.05 | 16.65 | 0.00 | 2.226 | 6.16 | 3.35 | 1.1 | 98.9 | 0.0 | 3.16 | 0.49 | 0.67 | 0.88 | 1.76 | 23989 | 3289 | 23 | 0 | 0 | 0 | 0 | logfile |
✔ | 9EWY | 50026 | 2025-01-14 | 2024-04-05 | 3.1 | 2.60 | 3.13 | 3.2 | 0.004 | 0.53 | 0.0 | 0.04 | 15.97 | 0.00 | 2.208 | 3.47 | 0.00 | 1.9 | 98.0 | 0.1 | 2.61 | 0.69 | 0.87 | 2.95 | 3.1 | 0.003 | 0.48 | 0.0 | 0.04 | 17.04 | 0.00 | 2.573 | 3.55 | 1.62 | 1.6 | 98.3 | 0.1 | 2.57 | 0.28 | 0.68 | 0.88 | 2.75 | 6496 | 815 | 2 | 0 | 3 | 0 | 0 | logfile |
✔ | 9EWZ | 50027 | 2025-05-13 | 2024-04-05 | 2.22 | 3.01 | 2.28 | 2.8 | 0.003 | 0.50 | 0.0 | 0.04 | 15.89 | 0.00 | 2.190 | 3.54 | 0.29 | 3.8 | 96.2 | 0.0 | 0.75 | 0.84 | 0.88 | 4.79 | 2.8 | 0.003 | 0.56 | 0.0 | 0.04 | 17.81 | 0.00 | 2.211 | 3.39 | 0.96 | 4.2 | 95.8 | 0.0 | 1.50 | 1.10 | 0.84 | 0.89 | 3.95 | 10780 | 1205 | 4 | 50 | 2 | 0 | 0 | logfile |
✔ | 9EX7 | 50032 | 2025-05-21 | 2024-04-05 | 2.91 | 3.43 | — | 2.0 | 0.003 | 0.47 | 0.0 | 0.04 | 9.80 | 0.00 | 1.950 | 4.81 | 0.71 | 4.7 | 95.3 | 0.0 | 0.45 | 0.88 | 0.79 | 3.05 | 1.9 | 0.004 | 0.60 | 0.0 | 0.04 | 12.82 | 0.00 | 1.889 | 4.47 | 1.07 | 5.4 | 94.6 | 0.0 | 0.33 | 1.08 | 0.91 | 0.87 | 2.78 | 21055 | 2596 | 6 | 0 | 3 | 0 | 0 | logfile |
✔ | 9EWY | 50026 | 2025-02-11 | 2024-04-05 | 3.1 | 2.60 | 3.13 | 3.2 | 0.004 | 0.53 | 0.0 | 0.04 | 15.97 | 0.00 | 2.208 | 3.47 | 0.00 | 1.9 | 98.0 | 0.1 | 2.61 | 0.69 | 0.87 | 2.95 | 3.1 | 0.003 | 0.48 | 0.0 | 0.04 | 17.04 | 0.00 | 2.573 | 3.55 | 1.62 | 1.6 | 98.3 | 0.1 | 2.57 | 0.28 | 0.68 | 0.88 | 2.75 | 6496 | 815 | 2 | 0 | 3 | 0 | 0 | logfile |