Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8RU2	19503	2024-11-17	2024-01-29	3.49	3.82	3.54	3.7	0.002	0.55	0.0	0.04	18.07	0.00	1.974	9.72	0.37	3.5	96.4	0.2	-0.23	0.71	0.73	1.08	3.7	0.003	0.67	0.0	0.04	18.27	0.00	1.962	10.87	3.36	4.3	95.6	0.1	-0.23	1.33	0.72	0.76	0.89	14773	1849	8	0	6	0	0	logfile
✘	8RU2	19503	2024-10-13	2024-01-29	3.49	3.82	3.54	3.7	0.002	0.55	0.0	0.04	18.07	0.00	1.974	9.72	0.37	3.5	96.4	0.2	-0.23	0.71	0.73	1.08	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14773	1849	8	0	6	0	0	logfile
✔	8RU2	19503	2024-09-27	2024-01-29	3.49	3.82	3.54	3.7	0.002	0.55	0.0	0.04	18.07	0.00	1.974	9.72	0.37	3.5	96.4	0.2	-0.23	0.71	0.73	1.08	3.7	0.003	0.67	0.0	0.04	18.27	0.00	1.962	10.87	3.36	4.3	95.6	0.1	-0.23	1.33	0.72	0.76	0.89	14773	1849	8	0	6	0	0	logfile
✔	8RTT	19496	2024-10-14	2024-01-29	3.56	3.72	3.51	3.6	0.004	0.52	0.0	0.04	16.49	0.00	1.740	5.80	0.20	2.2	97.8	0.0	0.18	0.79	0.85	1.76	3.6	0.003	0.58	0.0	0.04	16.85	0.00	1.965	6.38	2.10	2.5	97.5	0.0	1.11	0.38	0.79	0.86	1.89	18155	2274	16	0	14	0	0	logfile
✔	8RTT	19496	2024-11-19	2024-01-29	3.56	3.72	3.51	3.6	0.004	0.52	0.0	0.04	16.49	0.00	1.740	5.80	0.20	2.2	97.8	0.0	0.18	0.79	0.85	1.76	3.6	0.003	0.58	0.0	0.04	16.85	0.00	1.965	6.38	2.10	2.5	97.5	0.0	1.11	0.38	0.79	0.86	1.89	18155	2274	16	0	14	0	0	logfile
✔	8VUE	43529	2024-08-11	2024-01-29	3.59	3.93	3.71	3.8	0.007	0.94	9.0	0.06	15.99	0.01	1.828	15.02	4.98	6.1	93.5	0.3	-2.26	0.79	0.84	2.25	3.8	0.004	0.67	0.0	0.04	15.91	0.00	2.434	8.22	2.91	3.9	96.1	0.0	0.06	1.72	0.78	0.84	2.21	21501	2754	15	0	3	0	0	logfile
✔	8VUE	43529	2024-07-25	2024-01-29	3.59	3.93	3.71	3.8	0.007	0.94	9.0	0.06	15.99	0.01	1.828	15.02	4.98	6.1	93.5	0.3	-2.26	0.79	0.84	2.25	3.8	0.002	0.62	0.0	0.04	16.01	0.00	2.158	9.33	2.37	3.2	96.8	0.0	0.13	1.71	0.78	0.83	2.27	21501	2754	15	0	3	0	0	logfile
✔	8RTT	19496	2025-01-22	2024-01-29	3.56	3.72	3.51	3.6	0.004	0.52	0.0	0.04	16.49	0.00	1.740	5.80	0.20	2.2	97.8	0.0	0.18	0.79	0.85	1.76	3.6	0.004	0.62	0.0	0.04	16.85	0.00	1.908	6.43	2.25	2.6	97.4	0.0	1.01	0.38	0.79	0.87	1.98	18155	2274	16	0	14	0	0	logfile
✔	8RTT	19496	2024-06-29	2024-01-29	3.56	3.72	3.51	3.6	0.004	0.52	0.0	0.04	16.49	0.00	1.317	5.80	0.20	2.2	97.8	0.0	0.18	0.79	0.85	1.76	3.6	0.004	0.74	1.0	0.05	16.55	0.00	1.911	7.82	2.40	3.0	97.0	0.0	0.73	0.36	0.79	0.86	1.67	18155	2274	13	0	14	0	0	logfile
✔	8RTT	19496	2024-07-22	2024-01-29	3.56	3.72	3.51	3.6	0.004	0.52	0.0	0.04	16.49	0.00	1.317	5.80	0.20	2.2	97.8	0.0	0.18	0.79	0.85	1.76	3.6	0.005	0.80	1.0	0.05	16.81	0.00	1.842	8.37	2.15	2.9	97.1	0.0	0.85	0.38	0.79	0.87	1.77	18155	2274	16	0	14	0	0	logfile
✔	8RTT	19496	2024-08-07	2024-01-29	3.56	3.72	3.51	3.6	0.004	0.52	0.0	0.04	16.49	0.00	1.317	5.80	0.20	2.2	97.8	0.0	0.18	0.79	0.85	1.76	3.6	0.004	0.59	0.0	0.04	16.77	0.00	1.918	6.46	2.10	2.6	97.4	0.0	1.11	0.37	0.79	0.86	1.94	18155	2274	16	0	14	0	0	logfile
✔	8RTT	19496	2024-09-28	2024-01-29	3.56	3.72	3.51	3.6	0.004	0.52	0.0	0.04	16.49	0.00	1.740	5.80	0.20	2.2	97.8	0.0	0.18	0.79	0.85	1.76	3.6	0.003	0.58	0.0	0.04	16.85	0.00	1.965	6.38	2.10	2.5	97.5	0.0	1.11	0.38	0.79	0.86	1.89	18155	2274	16	0	14	0	0	logfile
✔	8Y3N	38892	2025-01-13	2024-01-29	3.8	4.11	3.77	4.1	0.007	0.82	0.0	0.05	13.36	0.01	2.382	11.92	0.00	11.9	88.1	0.0	-3.00	0.45	0.80	3.56	4.2	0.005	0.71	0.0	0.05	15.55	0.01	2.590	8.67	1.97	10.5	89.5	0.0	-1.61	1.03	0.43	0.79	3.15	3694	494	4	0	0	0	0	logfile
✔	8VUL	43532	2025-01-14	2024-01-29	3.83	4.04	6.77	4.0	0.004	0.68	0.0	0.04	16.80	0.01	2.218	7.73	0.27	8.8	90.9	0.3	-1.67	0.75	0.82	1.77	4.0	0.004	0.69	0.0	0.04	17.22	0.00	2.427	6.01	3.41	9.7	89.9	0.3	-1.43	0.30	0.74	0.82	1.70	7158	963	4	0	0	0	0	logfile
✔	8Y3P	38894	2024-11-18	2024-01-29	3.48	3.68	3.58	3.6	0.004	0.76	0.0	0.05	13.55	0.01	2.296	6.88	0.00	4.8	95.2	0.0	-1.81	0.71	0.79	2.80	3.7	0.003	0.60	0.0	0.04	15.48	0.00	2.535	9.15	1.71	5.5	94.5	0.0	-1.17	0.36	0.72	0.84	2.42	17028	2163	9	0	0	0	0	logfile
✔	8Y3R	38896	2024-12-31	2024-01-29	3.48	3.48	3.22	3.6	0.003	0.62	0.0	0.05	13.77	0.01	2.188	9.33	0.00	4.3	95.5	0.2	-1.23	0.62	0.71	1.52	3.5	0.006	0.90	2.0	0.05	15.86	0.01	2.207	7.75	3.01	4.7	95.2	0.1	-0.90	0.62	0.72	0.76	1.88	15735	2001	9	0	0	0	0	logfile
✔	8Y3N	38892	2025-02-11	2024-01-29	3.8	4.11	3.77	4.1	0.007	0.82	0.0	0.05	13.36	0.01	2.382	11.92	0.00	11.9	88.1	0.0	-3.00	0.45	0.80	3.56	4.2	0.005	0.71	0.0	0.05	15.55	0.01	2.590	8.67	1.97	10.5	89.5	0.0	-1.61	1.03	0.43	0.79	3.15	3694	494	4	0	0	0	0	logfile
✔	8Y3N	38892	2025-03-05	2024-01-29	3.8	4.11	3.76	4.1	0.007	0.82	0.0	0.05	13.36	0.01	2.382	11.92	0.00	11.9	88.1	0.0	-3.00	0.45	0.80	3.56	4.1	0.003	0.63	0.0	0.04	15.51	0.01	2.604	8.67	1.72	5.4	94.6	0.0	-1.26	1.04	0.42	0.78	3.56	3694	494	4	0	0	0	0	logfile
✔	8Y3R	38896	2024-11-18	2024-01-29	3.48	3.48	3.22	3.6	0.003	0.62	0.0	0.05	13.77	0.01	2.188	9.33	0.00	4.3	95.5	0.2	-1.23	0.62	0.71	1.52	3.5	0.006	0.90	2.0	0.05	15.86	0.01	2.207	7.75	3.01	4.7	95.2	0.1	-0.90	0.62	0.72	0.76	1.88	15735	2001	9	0	0	0	0	logfile
✔	8Y3R	38896	2024-10-13	2024-01-29	3.48	3.48	3.22	3.6	0.003	0.62	0.0	0.05	13.77	0.01	2.188	9.33	0.00	4.3	95.5	0.2	-1.23	0.62	0.71	1.52	3.5	0.006	0.90	2.0	0.05	15.86	0.01	2.207	7.75	3.01	4.7	95.2	0.1	-0.90	0.62	0.72	0.76	1.88	15735	2001	9	0	0	0	0	logfile

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