Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8VSU	43506	2024-11-18	2024-01-24	2.86	3.11	2.98	3.2	0.013	1.76	0.0	0.09	12.49	0.01	2.529	0.13	0.12	1.8	98.2	0.0	-1.20	0.70	0.85	4.70	3.2	0.004	0.92	0.0	0.04	15.92	0.00	2.322	1.71	0.84	2.1	97.9	0.0	1.62	1.83	0.64	0.86	3.53	15240	941	4	0	1	0	7646	logfile
✔	8VSU	43506	2024-12-31	2024-01-24	2.86	3.11	2.98	3.2	0.013	1.76	0.0	0.09	12.49	0.01	2.529	0.13	0.12	1.8	98.2	0.0	-1.20	0.70	0.85	4.70	3.2	0.004	0.92	0.0	0.04	15.92	0.00	2.322	1.71	0.84	2.1	97.9	0.0	1.62	1.83	0.64	0.86	3.53	15240	941	4	0	1	0	7646	logfile
✔	8Y1E	38833	2024-07-27	2024-01-24	2.7	2.89	2.81	2.9	0.010	1.07	0.0	0.07	17.71	0.01	2.244	7.62	15.59	11.3	88.6	0.2	-4.10	0.54	0.52	2.18	2.8	0.004	0.73	0.0	0.05	16.28	0.00	2.125	9.69	5.26	8.2	91.8	0.0	-2.03	0.78	0.68	0.79	1.94	37611	4659	24	0	93	0	0	logfile
✔	8Y19	38828	2024-07-25	2024-01-24	2.3	2.48	2.41	2.5	0.006	0.83	0.0	0.06	14.35	0.01	2.279	1.52	6.19	4.3	95.7	0.0	-1.92	0.57	0.64	4.23	2.5	0.003	0.66	0.0	0.05	14.54	0.00	2.204	3.37	3.11	3.8	96.2	0.0	-0.18	1.22	0.75	0.86	3.99	29541	3624	21	0	93	0	0	logfile
✔	8Y19	38828	2024-08-10	2024-01-24	2.3	2.48	2.41	2.5	0.006	0.83	0.0	0.06	14.35	0.01	2.279	1.52	6.19	4.3	95.7	0.0	-1.92	0.57	0.64	4.23	2.5	0.003	0.67	0.0	0.05	14.42	0.00	2.263	3.14	2.87	3.8	96.2	0.0	-0.24	1.21	0.75	0.86	3.98	29541	3624	21	0	93	0	0	logfile
✔	8RS9	19473	2024-07-26	2024-01-24	3.4	3.70	3.56	3.6	0.003	0.67	0.0	0.04	15.77	0.00	2.014	8.60	0.15	9.6	90.4	0.0	-1.80	0.75	0.75	1.54	3.5	0.003	0.68	0.0	0.04	16.91	0.00	2.102	9.68	3.50	8.4	91.6	0.0	-0.82	1.23	0.77	0.80	1.02	31359	4458	6	0	0	0	0	logfile
✔	8VSP	43501	2024-11-16	2024-01-24	3.12	2.30	3.11	2.0	0.004	0.53	0.0	0.04	9.48	0.00	2.029	8.71	0.51	3.3	96.7	0.0	0.72	0.78	0.79	3.96	2.0	0.003	0.56	0.0	0.04	14.00	0.00	2.580	5.40	2.38	3.2	96.8	0.0	2.19	0.55	0.77	0.79	3.05	11388	1476	12	0	3	0	0	logfile
✔	8VSP	43501	2025-01-17	2024-01-24	3.12	2.30	3.11	2.0	0.004	0.53	0.0	0.04	9.48	0.00	2.029	8.71	0.51	3.3	96.7	0.0	0.72	0.78	0.79	3.96	2.0	0.003	0.54	0.0	0.04	14.05	0.00	2.568	5.26	2.72	2.9	97.1	0.0	2.08	1.37	0.78	0.79	3.04	11388	1476	12	0	3	0	0	logfile
✔	8VSP	43501	2024-12-29	2024-01-24	3.12	2.30	3.11	2.0	0.004	0.53	0.0	0.04	9.48	0.00	2.029	8.71	0.51	3.3	96.7	0.0	0.72	0.78	0.79	3.96	2.0	0.003	0.56	0.0	0.04	14.00	0.00	2.580	5.40	2.38	3.2	96.8	0.0	2.19	0.55	0.77	0.79	3.05	11388	1476	12	0	3	0	0	logfile
✔	8VSP	43501	2024-09-25	2024-01-24	3.12	2.30	3.11	2.0	0.004	0.53	0.0	0.04	9.48	0.00	2.029	8.71	0.51	3.3	96.7	0.0	0.72	0.78	0.79	3.96	2.0	0.003	0.56	0.0	0.04	14.00	0.00	2.580	5.40	2.38	3.2	96.8	0.0	2.19	0.55	0.77	0.79	3.05	11388	1476	12	0	3	0	0	logfile
✔	8VSP	43501	2024-08-04	2024-01-24	3.12	2.30	3.11	2.0	0.004	0.53	0.0	0.04	9.48	0.00	2.066	8.71	0.51	3.3	96.7	0.0	0.72	0.78	0.79	3.96	2.0	0.003	0.55	0.0	0.04	14.04	0.01	2.574	5.44	1.87	3.3	96.7	0.0	2.06	0.55	0.78	0.79	3.27	11388	1476	12	0	3	0	0	logfile
✔	8VSP	43501	2024-10-12	2024-01-24	3.12	2.30	3.11	2.0	0.004	0.53	0.0	0.04	9.48	0.00	2.029	8.71	0.51	3.3	96.7	0.0	0.72	0.78	0.79	3.96	2.0	0.003	0.56	0.0	0.04	14.00	0.00	2.580	5.40	2.38	3.2	96.8	0.0	2.19	0.55	0.77	0.79	3.05	11388	1476	12	0	3	0	0	logfile
✔	8VSP	43501	2024-06-27	2024-01-24	3.12	2.30	3.11	2.0	0.004	0.53	0.0	0.04	9.48	0.00	2.066	8.71	0.51	3.3	96.7	0.0	0.72	0.78	0.79	3.96	2.0	0.003	0.54	0.0	0.04	13.94	0.00	2.257	6.76	1.87	3.5	96.5	0.0	2.45	0.56	0.78	0.79	2.92	11388	1476	12	0	3	0	0	logfile
✔	8VSP	43501	2024-07-20	2024-01-24	3.12	2.30	3.11	2.0	0.004	0.53	0.0	0.04	9.48	0.00	2.066	8.71	0.51	3.3	96.7	0.0	0.72	0.78	0.79	3.96	2.0	0.003	0.53	0.0	0.04	13.94	0.00	2.257	6.76	1.87	3.5	96.5	0.0	2.45	0.56	0.78	0.79	2.92	11388	1476	12	0	3	0	0	logfile
✔	8Y1G	38835	2024-08-10	2024-01-24	2.99	3.22	3.09	3.1	0.010	0.98	0.0	0.06	16.47	0.01	2.222	4.94	12.14	8.0	92.0	0.0	-4.04	0.66	0.67	2.48	3.1	0.004	0.66	0.0	0.05	15.33	0.01	2.112	6.13	3.39	5.8	94.2	0.0	-1.38	1.23	0.74	0.81	2.25	29541	3624	21	0	93	0	0	logfile
✔	8Y1G	38835	2024-07-25	2024-01-24	2.99	3.22	3.09	3.1	0.010	0.98	0.0	0.06	16.47	0.01	2.222	4.94	12.14	8.0	92.0	0.0	-4.04	0.66	0.67	2.48	3.1	0.004	0.63	0.0	0.05	15.20	0.01	2.141	8.18	3.94	5.9	94.1	0.0	-1.36	1.22	0.74	0.81	2.31	29541	3624	21	0	93	0	0	logfile
✔	8RSB	19475	2024-07-26	2024-01-24	3.4	2.80	3.33	3.2	0.003	0.71	0.0	0.05	15.79	0.00	1.947	6.08	0.14	4.4	95.6	0.0	-0.48	0.67	0.70	1.44	3.1	0.005	0.90	1.0	0.05	17.09	0.01	1.965	8.22	2.75	5.8	94.2	0.0	-0.52	1.41	0.72	0.79	1.81	31884	4452	12	0	12	0	0	logfile
✘	8RSB	19475	2024-08-11	2024-01-24	3.4	2.80	3.33	3.2	0.003	0.71	0.0	0.05	15.79	0.00	1.947	6.08	0.14	4.4	95.6	0.0	-0.48	0.67	0.70	1.44	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	31884	4452	12	0	12	0	0	logfile
✔	8Y1H	38836	2024-07-25	2024-01-24	3.16	3.42	3.30	3.2	0.006	0.94	0.0	0.05	17.12	0.01	2.224	6.06	15.19	8.0	92.0	0.0	-4.56	0.62	0.55	1.14	3.2	0.003	0.67	1.0	0.05	15.53	0.00	1.994	11.71	5.39	7.5	92.5	0.0	-2.11	1.29	0.70	0.70	1.02	29541	3624	21	0	93	0	0	logfile
✔	8Y1H	38836	2024-08-10	2024-01-24	3.16	3.42	3.30	3.2	0.006	0.94	0.0	0.05	17.12	0.01	2.224	6.06	15.19	8.0	92.0	0.0	-4.56	0.62	0.55	1.14	3.2	0.003	0.67	1.0	0.05	15.56	0.00	2.420	8.98	4.90	6.5	93.5	0.0	-2.14	1.69	0.70	0.70	1.03	29541	3624	21	0	93	0	0	logfile

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