Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8ZBZ	39917	2025-06-29	2024-04-28	4.71	4.57	4.73	4.4	0.003	0.71	0.0	0.05	14.17	0.01	1.945	4.88	0.11	3.8	96.2	0.0	-1.66	0.75	0.73	—	4.4	0.003	0.65	0.0	0.05	13.52	0.00	2.388	9.58	0.03	5.6	94.4	0.0	-1.02	1.40	0.76	0.77	—	33999	4282	29	0	60	0	0	logfile
✔	8ZC1	39919	2024-10-09	2024-04-28	4.17	4.43	4.20	4.3	0.003	0.75	0.0	0.05	13.38	0.01	2.313	5.92	0.00	4.3	95.7	0.0	-1.66	0.73	0.72	—	4.3	0.003	0.65	0.0	0.05	13.45	0.00	2.494	9.72	0.00	5.8	94.2	0.0	-1.44	0.60	0.74	0.74	—	4570	597	3	0	0	0	0	logfile
✔	8ZC1	39919	2024-11-14	2024-04-28	4.17	4.43	4.20	4.3	0.003	0.75	0.0	0.05	13.38	0.01	2.313	5.92	0.00	4.3	95.7	0.0	-1.66	0.73	0.72	—	4.3	0.003	0.65	0.0	0.05	13.45	0.00	2.494	9.72	0.00	5.8	94.2	0.0	-1.44	0.60	0.74	0.74	—	4570	597	3	0	0	0	0	logfile
✔	8ZC1	39919	2024-12-27	2024-04-28	4.17	4.43	4.20	4.3	0.003	0.75	0.0	0.05	13.38	0.01	2.313	5.92	0.00	4.3	95.7	0.0	-1.66	0.73	0.72	—	4.3	0.003	0.65	0.0	0.05	13.45	0.00	2.494	9.72	0.00	5.8	94.2	0.0	-1.44	0.60	0.74	0.74	—	4570	597	3	0	0	0	0	logfile
✔	8ZC1	39919	2024-09-23	2024-04-28	4.17	4.43	4.20	4.3	0.003	0.75	0.0	0.05	13.38	0.01	2.313	5.92	0.00	4.3	95.7	0.0	-1.66	0.73	0.72	—	4.3	0.003	0.65	0.0	0.05	13.45	0.00	2.494	9.72	0.00	5.8	94.2	0.0	-1.44	0.60	0.74	0.74	—	4570	597	3	0	0	0	0	logfile
✔	8ZC1	39919	2025-06-05	2024-04-28	4.17	4.43	4.20	4.3	0.003	0.76	0.0	0.05	13.38	0.01	2.313	5.92	0.00	4.3	95.7	0.0	-1.66	0.73	0.72	—	4.3	0.004	0.66	0.0	0.05	13.40	0.00	2.504	10.62	0.00	5.7	94.3	0.0	-1.54	0.56	0.74	0.74	—	4570	597	3	0	0	0	0	logfile
✔	8ZC1	39919	2025-05-10	2024-04-28	4.17	4.43	4.20	4.3	0.003	0.76	0.0	0.05	13.38	0.01	2.313	5.92	0.00	4.3	95.7	0.0	-1.66	0.73	0.72	—	4.3	0.005	0.73	0.0	0.05	13.52	0.01	2.523	12.97	0.00	7.4	92.6	0.0	-1.57	0.61	0.75	0.75	—	4570	597	3	0	0	0	0	logfile
✔	8ZC1	39919	2025-01-14	2024-04-28	4.17	4.43	4.20	4.3	0.003	0.75	0.0	0.05	13.38	0.01	2.313	5.92	0.00	4.3	95.7	0.0	-1.66	0.73	0.72	—	4.3	0.003	0.70	0.0	0.05	13.50	0.01	2.485	10.28	0.00	6.2	93.8	0.0	-1.68	0.62	0.75	0.74	—	4570	597	3	0	0	0	0	logfile
✔	8ZC1	39919	2025-04-27	2024-04-28	4.17	4.43	4.20	4.3	0.003	0.76	0.0	0.05	13.38	0.01	2.313	5.92	0.00	4.3	95.7	0.0	-1.66	0.73	0.72	—	4.3	0.004	0.66	0.0	0.05	13.40	0.00	2.504	10.62	0.00	5.7	94.3	0.0	-1.54	0.56	0.74	0.74	—	4570	597	3	0	0	0	0	logfile
✔	8ZC1	39919	2025-02-11	2024-04-28	4.17	4.43	4.20	4.3	0.003	0.75	0.0	0.05	13.38	0.01	2.313	5.92	0.00	4.3	95.7	0.0	-1.66	0.73	0.72	—	4.3	0.003	0.70	0.0	0.05	13.50	0.01	2.485	10.28	0.00	6.2	93.8	0.0	-1.68	0.62	0.75	0.74	—	4570	597	3	0	0	0	0	logfile
✔	8ZC5	39923	2024-12-27	2024-04-28	3.91	4.07	3.86	4.0	0.004	0.76	0.0	0.05	13.55	0.01	2.258	4.88	0.00	4.4	95.6	0.0	-1.55	0.74	0.78	2.73	4.0	0.003	0.67	0.0	0.05	14.99	0.00	2.515	8.18	1.71	4.4	95.6	0.0	-0.90	1.46	0.74	0.79	2.49	6515	830	8	0	2	0	0	logfile
✔	8ZC5	39923	2024-11-14	2024-04-28	3.91	4.07	3.86	4.0	0.004	0.76	0.0	0.05	13.55	0.01	2.258	4.88	0.00	4.4	95.6	0.0	-1.55	0.74	0.78	2.73	4.0	0.003	0.67	0.0	0.05	14.99	0.00	2.515	8.18	1.71	4.4	95.6	0.0	-0.90	1.46	0.74	0.79	2.49	6515	830	8	0	2	0	0	logfile
✔	8ZC4	39922	2025-05-30	2024-04-28	3.95	4.08	3.89	4.1	0.004	0.72	0.0	0.05	13.87	0.01	2.224	4.81	0.03	4.9	95.1	0.0	-1.57	0.73	0.73	1.28	4.1	0.002	0.61	0.0	0.04	15.10	0.00	2.469	6.32	1.45	4.3	95.7	0.0	-0.98	0.36	0.72	0.72	1.29	33840	4283	24	0	48	0	0	logfile
✔	8ZC4	39922	2025-06-29	2024-04-28	3.95	4.08	3.89	4.1	0.004	0.72	0.0	0.05	13.87	0.01	2.224	4.81	0.03	4.9	95.1	0.0	-1.57	0.73	0.73	1.28	4.1	0.004	0.64	0.0	0.04	15.15	0.00	2.448	7.36	2.53	5.2	94.8	0.0	-1.06	0.37	0.72	0.72	1.29	33840	4283	24	0	48	0	0	logfile
✔	8ZC5	39923	2024-09-24	2024-04-28	3.91	4.07	3.86	4.0	0.004	0.76	0.0	0.05	13.55	0.01	2.258	4.88	0.00	4.4	95.6	0.0	-1.55	0.74	0.78	2.73	4.0	0.003	0.67	0.0	0.05	14.99	0.00	2.515	8.18	1.71	4.4	95.6	0.0	-0.90	1.46	0.74	0.79	2.49	6515	830	8	0	2	0	0	logfile
✔	8ZC5	39923	2025-05-10	2024-04-28	3.91	4.07	3.86	4.0	0.004	0.76	0.0	0.05	13.55	0.01	2.258	4.88	0.00	4.4	95.6	0.0	-1.55	0.74	0.78	2.73	4.0	0.004	0.68	0.0	0.05	15.09	0.00	2.551	9.68	1.57	5.3	94.7	0.0	-1.15	1.46	0.76	0.81	2.26	6515	830	8	0	2	0	0	logfile
✔	8ZC5	39923	2025-06-05	2024-04-28	3.91	4.07	3.86	4.0	0.004	0.76	0.0	0.05	13.55	0.01	2.258	4.88	0.00	4.4	95.6	0.0	-1.55	0.74	0.78	2.73	4.0	0.004	0.70	0.0	0.05	15.18	0.00	2.496	9.29	1.71	4.8	95.2	0.0	-1.25	1.47	0.75	0.80	2.41	6515	830	8	0	2	0	0	logfile
✔	8ZC5	39923	2024-10-10	2024-04-28	3.91	4.07	3.86	4.0	0.004	0.76	0.0	0.05	13.55	0.01	2.258	4.88	0.00	4.4	95.6	0.0	-1.55	0.74	0.78	2.73	4.0	0.003	0.67	0.0	0.05	14.99	0.00	2.515	8.18	1.71	4.4	95.6	0.0	-0.90	1.46	0.74	0.79	2.49	6515	830	8	0	2	0	0	logfile
✔	8ZC3	39921	2025-06-29	2024-04-28	4.69	4.15	4.56	4.3	0.004	0.70	0.0	0.05	13.97	0.01	1.984	5.12	0.16	4.0	96.0	0.0	-1.49	0.71	0.72	—	4.2	0.003	0.62	0.0	0.04	13.77	0.00	2.481	9.38	0.00	5.0	95.0	0.0	-0.95	0.51	0.72	0.76	—	33856	4282	23	0	50	0	0	logfile
✔	8ZC5	39923	2025-03-11	2024-04-28	3.91	4.07	3.86	4.0	0.004	0.76	0.0	0.05	13.55	0.01	2.258	4.88	0.00	4.4	95.6	0.0	-1.55	0.74	0.78	2.73	4.0	0.004	0.68	0.0	0.05	15.01	0.00	2.540	8.66	2.14	5.2	94.8	0.0	-1.23	1.46	0.76	0.80	2.40	6515	830	8	0	2	0	0	logfile

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