Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8ZC4	39922	2025-06-29	2024-04-28	3.95	4.08	3.89	4.1	0.004	0.72	0.0	0.05	13.87	0.01	2.224	4.81	0.03	4.9	95.1	0.0	-1.57	0.73	0.73	1.28	4.1	0.004	0.64	0.0	0.04	15.15	0.00	2.448	7.36	2.53	5.2	94.8	0.0	-1.06	0.37	0.72	0.72	1.29	33840	4283	24	0	48	0	0	logfile
✔	8ZC4	39922	2025-05-30	2024-04-28	3.95	4.08	3.89	4.1	0.004	0.72	0.0	0.05	13.87	0.01	2.224	4.81	0.03	4.9	95.1	0.0	-1.57	0.73	0.73	1.28	4.1	0.002	0.61	0.0	0.04	15.10	0.00	2.469	6.32	1.45	4.3	95.7	0.0	-0.98	0.36	0.72	0.72	1.29	33840	4283	24	0	48	0	0	logfile
✔	8ZC3	39921	2025-06-29	2024-04-28	4.69	4.15	4.56	4.3	0.004	0.70	0.0	0.05	13.97	0.01	1.984	5.12	0.16	4.0	96.0	0.0	-1.49	0.71	0.72	—	4.2	0.003	0.62	0.0	0.04	13.77	0.00	2.481	9.38	0.00	5.0	95.0	0.0	-0.95	0.51	0.72	0.76	—	33856	4282	23	0	50	0	0	logfile
✘	8ZC1	39919	2025-03-06	2024-04-28	4.17	4.43	4.20	4.3	0.003	0.75	0.0	0.05	13.38	0.01	2.313	5.92	0.00	4.3	95.7	0.0	-1.66	0.73	0.72	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	4570	597	3	0	0	0	0	logfile
✔	8ZBQ	39907	2025-01-14	2024-04-27	3.03	3.22	3.02	3.2	0.006	0.92	2.0	0.05	16.51	0.01	2.261	24.87	6.41	9.8	90.2	0.0	-2.05	0.66	0.78	2.44	3.2	0.004	0.63	0.0	0.04	16.86	0.00	2.455	12.76	4.37	7.4	92.6	0.0	-0.88	1.27	0.66	0.81	2.39	6346	779	2	0	0	0	0	logfile
✔	8ZBQ	39907	2025-06-05	2024-04-27	3.03	3.22	3.02	3.2	0.006	0.92	2.0	0.05	16.51	0.01	2.261	24.87	6.41	9.8	90.2	0.0	-2.05	0.66	0.78	2.44	3.2	0.004	0.64	0.0	0.04	17.02	0.00	2.449	12.19	4.23	7.1	92.9	0.0	-0.98	1.27	0.66	0.80	2.42	6346	779	2	0	0	0	0	logfile
✔	8ZBQ	39907	2024-09-24	2024-04-27	3.03	3.22	3.02	3.2	0.006	0.92	2.0	0.05	16.51	0.01	2.261	24.87	6.41	9.8	90.2	0.0	-2.05	0.66	0.78	2.44	3.2	0.003	0.64	0.0	0.04	17.04	0.00	2.475	12.59	4.08	6.7	93.3	0.0	-0.95	1.28	0.66	0.80	2.32	6346	779	2	0	0	0	0	logfile
✔	8ZBQ	39907	2025-05-10	2024-04-27	3.03	3.22	3.02	3.2	0.006	0.92	2.0	0.05	16.51	0.01	2.261	24.87	6.41	9.8	90.2	0.0	-2.05	0.66	0.78	2.44	3.2	0.003	0.62	0.0	0.04	16.82	0.00	2.470	12.35	4.96	7.0	93.0	0.0	-0.91	1.27	0.66	0.81	2.59	6346	779	2	0	0	0	0	logfile
✔	8ZBQ	39907	2024-10-10	2024-04-27	3.03	3.22	3.02	3.2	0.006	0.92	2.0	0.05	16.51	0.01	2.261	24.87	6.41	9.8	90.2	0.0	-2.05	0.66	0.78	2.44	3.2	0.003	0.64	0.0	0.04	17.04	0.00	2.475	12.59	4.08	6.7	93.3	0.0	-0.95	1.28	0.66	0.80	2.32	6346	779	2	0	0	0	0	logfile
✔	8ZBQ	39907	2024-11-14	2024-04-27	3.03	3.22	3.02	3.2	0.006	0.92	2.0	0.05	16.51	0.01	2.261	24.87	6.41	9.8	90.2	0.0	-2.05	0.66	0.78	2.44	3.2	0.003	0.64	0.0	0.04	17.04	0.00	2.475	12.59	4.08	6.7	93.3	0.0	-0.95	1.28	0.66	0.80	2.32	6346	779	2	0	0	0	0	logfile
✔	8ZBQ	39907	2024-12-27	2024-04-27	3.03	3.22	3.02	3.2	0.006	0.92	2.0	0.05	16.51	0.01	2.261	24.87	6.41	9.8	90.2	0.0	-2.05	0.66	0.78	2.44	3.2	0.003	0.64	0.0	0.04	17.04	0.00	2.475	12.59	4.08	6.7	93.3	0.0	-0.95	1.28	0.66	0.80	2.32	6346	779	2	0	0	0	0	logfile
✔	8ZBQ	39907	2025-04-27	2024-04-27	3.03	3.22	3.02	3.2	0.006	0.92	2.0	0.05	16.51	0.01	2.261	24.87	6.41	9.8	90.2	0.0	-2.05	0.66	0.78	2.44	3.2	0.004	0.64	0.0	0.04	17.02	0.00	2.449	12.19	4.23	7.1	92.9	0.0	-0.98	1.27	0.66	0.80	2.42	6346	779	2	0	0	0	0	logfile
✔	8ZBQ	39907	2025-03-11	2024-04-27	3.03	3.22	3.02	3.2	0.006	0.92	2.0	0.05	16.51	0.01	2.261	24.87	6.41	9.8	90.2	0.0	-2.05	0.66	0.78	2.44	3.2	0.004	0.65	0.0	0.04	17.05	0.00	2.468	12.59	4.81	7.4	92.6	0.0	-0.98	1.27	0.66	0.81	2.50	6346	779	2	0	0	0	0	logfile
✔	8ZBQ	39907	2025-02-11	2024-04-27	3.03	3.22	3.02	3.2	0.006	0.92	2.0	0.05	16.51	0.01	2.261	24.87	6.41	9.8	90.2	0.0	-2.05	0.66	0.78	2.44	3.2	0.004	0.63	0.0	0.04	16.86	0.00	2.455	12.76	4.37	7.4	92.6	0.0	-0.88	1.27	0.66	0.81	2.39	6346	779	2	0	0	0	0	logfile
✔	8ZB9	39898	2024-11-14	2024-04-26	3.31	3.44	3.32	3.5	0.007	0.87	0.0	0.05	16.83	0.01	2.267	16.36	0.37	14.2	85.8	0.0	-3.11	0.73	0.86	3.12	3.5	0.003	0.62	0.0	0.04	17.55	0.00	2.534	6.92	5.16	9.3	90.7	0.0	-2.10	0.43	0.72	0.84	3.11	4904	622	2	0	0	0	0	logfile
✔	8ZB9	39898	2024-12-27	2024-04-26	3.31	3.44	3.32	3.5	0.007	0.87	0.0	0.05	16.83	0.01	2.267	16.36	0.37	14.2	85.8	0.0	-3.11	0.73	0.86	3.12	3.5	0.003	0.62	0.0	0.04	17.55	0.00	2.534	6.92	5.16	9.3	90.7	0.0	-2.10	0.43	0.72	0.84	3.11	4904	622	2	0	0	0	0	logfile
✔	8ZB9	39898	2025-02-11	2024-04-26	3.31	3.44	3.32	3.5	0.007	0.87	0.0	0.05	16.83	0.01	2.267	16.36	0.37	14.2	85.8	0.0	-3.11	0.73	0.86	3.12	3.5	0.003	0.62	0.0	0.04	17.50	0.00	2.516	6.92	5.16	9.1	90.9	0.0	-2.07	0.43	0.72	0.85	3.07	4904	622	2	0	0	0	0	logfile
✔	8ZB9	39898	2025-03-06	2024-04-26	3.31	3.44	3.33	3.5	0.007	0.87	0.0	0.05	16.83	0.01	2.267	16.36	0.37	14.2	85.8	0.0	-3.11	0.73	0.86	3.12	3.5	0.003	0.62	0.0	0.04	17.45	0.00	2.534	7.03	3.50	10.1	89.9	0.0	-2.04	0.41	0.72	0.84	3.09	4904	622	2	0	0	0	0	logfile
✔	8ZB9	39898	2025-04-27	2024-04-26	3.31	3.44	3.33	3.5	0.008	1.10	0.0	0.05	16.83	0.01	2.267	16.36	0.37	14.2	85.8	0.0	-3.11	0.73	0.86	3.12	3.5	0.003	0.64	0.0	0.04	17.70	0.00	2.480	6.71	4.79	9.9	90.1	0.0	-2.17	0.44	0.73	0.85	3.20	4904	622	2	0	0	0	0	logfile
✔	8ZB9	39898	2025-05-10	2024-04-26	3.31	3.44	3.33	3.5	0.008	1.10	0.0	0.05	16.83	0.01	2.267	16.36	0.37	14.2	85.8	0.0	-3.11	0.73	0.86	3.12	3.5	0.003	0.65	0.0	0.04	17.68	0.00	2.466	6.71	4.60	9.4	90.6	0.0	-2.11	0.44	0.73	0.85	3.18	4904	622	2	0	0	0	0	logfile

• ← previous
• Page 255 of 5208
• next →