Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9B3L	44144	2025-04-26	2024-03-19	3.25	3.40	3.12	3.3	0.003	0.54	0.0	0.04	15.96	0.00	2.274	9.17	0.40	2.6	97.4	0.0	2.14	0.61	0.84	1.47	3.4	0.004	0.65	0.0	0.04	16.30	0.00	2.560	8.98	6.32	2.0	98.0	0.0	2.29	0.42	0.60	0.84	1.72	2623	358	1	0	0	0	0	logfile
✔	9B3L	44144	2025-05-09	2024-03-19	3.25	3.40	3.12	3.3	0.003	0.54	0.0	0.04	15.96	0.00	2.274	9.17	0.40	2.6	97.4	0.0	2.14	0.61	0.84	1.47	3.4	0.004	0.66	0.0	0.04	16.28	0.00	2.550	9.36	6.32	2.3	97.7	0.0	2.24	0.41	0.60	0.84	1.68	2623	358	1	0	0	0	0	logfile
✔	9B3D	44135	2024-08-08	2024-03-19	3.41	4.16	3.57	3.8	0.005	0.88	0.0	0.05	15.33	0.01	2.099	1.98	0.00	3.7	96.2	0.1	-3.30	0.79	0.76	1.16	3.8	0.003	0.72	0.0	0.04	15.98	0.00	1.881	9.11	0.82	3.5	96.4	0.1	0.65	0.79	0.80	0.80	1.08	23621	2967	14	0	12	0	0	logfile
✔	9B3D	44135	2025-05-23	2024-03-19	3.41	4.16	3.57	3.8	0.005	0.88	0.0	0.05	15.33	0.01	2.099	1.98	0.00	3.7	96.2	0.1	-3.30	0.79	0.76	1.16	3.8	0.003	0.72	0.0	0.04	15.98	0.00	1.883	9.39	0.98	3.5	96.5	0.1	0.50	0.79	0.80	0.80	1.22	23621	2967	14	0	12	0	0	logfile
✔	9B3D	44135	2024-09-29	2024-03-19	3.41	4.16	3.57	3.8	0.005	0.88	0.0	0.05	15.33	0.01	2.099	1.98	0.00	3.7	96.2	0.1	-3.30	0.79	0.76	1.16	3.8	0.003	0.72	0.0	0.04	15.98	0.00	1.881	9.11	0.82	3.5	96.4	0.1	0.65	0.79	0.80	0.80	1.08	23621	2967	14	0	12	0	0	logfile
✔	9B3D	44135	2025-01-25	2024-03-19	3.41	4.16	3.57	3.8	0.005	0.88	0.0	0.05	15.33	0.01	2.099	1.98	0.00	3.7	96.2	0.1	-3.30	0.79	0.76	1.16	3.8	0.003	0.72	0.0	0.04	15.98	0.00	1.883	9.39	0.98	3.5	96.5	0.1	0.50	0.79	0.80	0.80	1.22	23621	2967	14	0	12	0	0	logfile
✔	9B3i	44141	2025-05-17	2024-03-19	2.88	3.47	—	3.0	0.006	0.78	0.0	0.05	13.83	0.00	1.769	10.80	0.30	1.8	98.2	0.0	0.61	0.82	0.73	2.51	3.1	0.004	0.82	0.0	0.04	15.88	0.00	1.862	11.64	1.97	1.7	98.3	0.0	1.24	0.99	0.81	0.80	2.13	14951	1854	7	0	2	0	0	logfile
✔	9B3i	44141	2024-12-31	2024-03-19	2.88	3.47	—	3.0	0.006	0.78	0.0	0.05	13.83	0.00	1.769	10.80	0.30	1.8	98.2	0.0	0.61	0.82	0.73	2.51	3.1	0.004	0.86	0.0	0.04	15.95	0.00	1.852	13.37	1.43	1.6	98.4	0.0	0.97	1.02	0.81	0.79	2.03	14951	1854	7	0	2	0	0	logfile
✔	9B3H	44139	2025-04-27	2024-03-19	4.0	4.35	3.53	4.0	0.004	0.73	0.0	0.05	14.64	0.00	2.133	16.50	0.15	1.4	98.6	0.0	1.02	0.87	0.83	—	4.0	0.003	0.65	0.0	0.04	15.14	0.00	2.523	9.83	1.54	1.5	98.5	0.0	0.98	0.37	0.89	0.85	—	5979	747	4	0	5	0	0	logfile
✔	9B3H	44139	2025-05-10	2024-03-19	4.0	4.35	3.53	4.0	0.004	0.73	0.0	0.05	14.64	0.00	2.133	16.50	0.15	1.4	98.6	0.0	1.02	0.87	0.83	—	4.0	0.006	0.70	0.0	0.04	15.18	0.00	2.486	11.37	1.69	2.0	98.0	0.0	0.74	0.37	0.89	0.86	—	5979	747	4	0	5	0	0	logfile
✔	9B3i	44141	2025-01-20	2024-03-19	2.88	3.47	—	3.0	0.006	0.78	0.0	0.05	13.83	0.00	1.769	10.80	0.30	1.8	98.2	0.0	0.61	0.82	0.73	2.51	3.1	0.004	0.82	0.0	0.04	15.88	0.00	1.862	11.64	1.97	1.7	98.3	0.0	1.24	0.99	0.81	0.80	2.13	14951	1854	7	0	2	0	0	logfile
✔	9EPR	19884	2025-05-11	2024-03-19	4.9	4.87	4.69	4.7	0.005	0.93	0.0	0.05	17.43	0.01	2.296	13.12	14.42	7.8	91.8	0.5	-3.94	0.67	0.73	—	4.7	0.003	0.73	0.0	0.04	12.72	0.00	2.502	12.91	0.00	5.7	94.3	0.0	-1.13	3.80	0.66	0.72	—	7046	890	5	0	1	0	0	logfile
✔	9EPR	19884	2024-11-14	2024-03-19	4.9	4.87	4.71	4.7	0.004	0.93	0.0	0.05	17.43	0.01	2.296	13.12	14.42	7.8	91.8	0.5	-3.94	0.67	0.73	—	4.7	0.003	0.75	0.0	0.05	12.75	0.00	2.409	13.05	0.00	5.6	94.4	0.0	-0.90	2.93	0.66	0.72	—	7046	890	5	0	1	0	0	logfile
✔	9EPR	19884	2025-02-12	2024-03-19	4.9	4.87	4.71	4.7	0.004	0.93	0.0	0.05	17.43	0.01	2.296	13.12	14.42	7.8	91.8	0.5	-3.94	0.67	0.73	—	4.7	0.003	0.73	0.0	0.04	12.72	0.00	2.502	12.91	0.00	5.7	94.3	0.0	-1.13	3.80	0.66	0.72	—	7046	890	5	0	1	0	0	logfile
✔	9EPR	19884	2025-01-14	2024-03-19	4.9	4.87	4.71	4.7	0.004	0.93	0.0	0.05	17.43	0.01	2.296	13.12	14.42	7.8	91.8	0.5	-3.94	0.67	0.73	—	4.7	0.003	0.73	0.0	0.04	12.72	0.00	2.502	12.91	0.00	5.7	94.3	0.0	-1.13	3.80	0.66	0.72	—	7046	890	5	0	1	0	0	logfile
✔	9EPR	19884	2025-03-12	2024-03-19	4.9	4.87	4.69	4.7	0.004	0.93	0.0	0.05	17.43	0.01	2.296	13.12	14.42	7.8	91.8	0.5	-3.94	0.67	0.73	—	4.7	0.003	0.76	0.0	0.05	12.95	0.00	2.346	15.05	0.00	6.5	93.5	0.0	-1.27	3.28	0.67	0.73	—	7046	890	5	0	1	0	0	logfile
✔	9EPR	19884	2024-12-28	2024-03-19	4.9	4.87	4.71	4.7	0.004	0.93	0.0	0.05	17.43	0.01	2.296	13.12	14.42	7.8	91.8	0.5	-3.94	0.67	0.73	—	4.7	0.003	0.75	0.0	0.05	12.75	0.00	2.409	13.05	0.00	5.6	94.4	0.0	-0.90	2.93	0.66	0.72	—	7046	890	5	0	1	0	0	logfile
✔	9EPR	19884	2025-04-28	2024-03-19	4.9	4.87	4.69	4.7	0.005	0.93	0.0	0.05	17.43	0.01	2.296	13.12	14.42	7.8	91.8	0.5	-3.94	0.67	0.73	—	4.7	0.003	0.75	0.0	0.05	12.70	0.00	2.375	14.27	0.00	6.3	93.7	0.0	-1.14	3.80	0.66	0.73	—	7046	890	5	0	1	0	0	logfile
✔	8YQQ	39502	2025-04-27	2024-03-19	3.95	2.96	3.86	3.4	0.021	1.32	0.0	0.07	17.14	0.04	1.447	16.88	8.03	9.9	87.3	2.8	-3.12	0.87	0.83	2.44	3.4	0.004	0.76	0.0	0.05	15.61	0.00	2.017	7.89	2.09	7.1	92.9	0.0	-1.58	0.96	0.88	0.84	2.79	5141	649	4	0	6	0	0	logfile
✔	9B3K	44143	2024-12-27	2024-03-19	2.56	2.75	2.56	2.9	0.004	0.59	0.0	0.04	17.05	0.00	2.195	8.40	4.35	3.6	96.4	0.0	1.63	0.69	0.85	2.99	2.9	0.003	0.57	0.0	0.04	16.88	0.00	2.543	7.17	3.15	3.2	96.8	0.0	2.03	0.20	0.68	0.87	2.82	6063	797	3	0	0	0	0	logfile

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