Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8YQQ	39502	2025-01-14	2024-03-19	3.95	2.96	3.87	3.4	0.008	1.28	0.0	0.07	17.14	0.04	1.447	16.88	8.03	9.9	87.3	2.8	-3.12	0.87	0.83	2.44	3.4	0.003	0.71	0.0	0.05	15.68	0.00	2.016	7.39	2.79	5.9	94.1	0.0	-1.43	0.96	0.88	0.84	2.57	5141	649	4	0	6	0	0	logfile
✔	8YQQ	39502	2025-03-06	2024-03-19	3.95	2.96	3.86	3.4	0.008	1.28	0.0	0.07	17.14	0.04	1.447	16.88	8.03	9.9	87.3	2.8	-3.12	0.87	0.83	2.44	3.4	0.003	0.71	0.0	0.05	15.58	0.00	2.015	7.09	2.79	5.9	94.1	0.0	-1.41	0.96	0.87	0.83	2.53	5141	649	4	0	6	0	0	logfile
✔	8YQQ	39502	2024-10-09	2024-03-19	3.95	2.96	3.87	3.4	0.008	1.28	0.0	0.07	17.14	0.04	1.447	16.88	8.03	9.9	87.3	2.8	-3.12	0.87	0.83	2.44	3.4	0.003	0.71	0.0	0.05	15.59	0.00	2.017	7.39	2.97	6.2	93.8	0.0	-1.41	0.96	0.87	0.83	2.52	5141	649	4	0	6	0	0	logfile
✔	9B3P	44148	2025-01-17	2024-03-19	3.0	2.71	3.02	3.0	0.002	0.37	0.0	0.03	24.09	0.00	2.292	3.54	0.16	4.6	94.9	0.6	-5.86	0.70	0.70	1.67	2.9	0.005	0.64	0.0	0.04	27.70	0.00	2.521	5.14	2.30	3.5	96.5	0.0	1.23	0.99	0.81	0.86	3.74	11067	738	10	256	0	0	0	logfile
✔	9EPo	19881	2025-01-14	2024-03-19	1.9	2.08	1.97	2.1	0.005	0.86	0.0	0.06	10.14	0.01	2.140	1.04	0.00	0.3	99.7	0.0	1.04	0.41	0.58	5.97	2.1	0.004	0.63	0.0	0.04	15.94	0.00	2.561	4.23	2.55	0.6	99.4	0.0	2.18	1.64	0.67	0.83	5.40	5860	692	6	0	6	94	0	logfile
✔	9EPo	19881	2025-02-11	2024-03-19	1.9	2.08	1.97	2.1	0.005	0.86	0.0	0.06	10.14	0.01	2.140	1.04	0.00	0.3	99.7	0.0	1.04	0.41	0.58	5.97	2.1	0.004	0.63	0.0	0.04	15.94	0.00	2.561	4.23	2.55	0.6	99.4	0.0	2.18	1.64	0.67	0.83	5.40	5860	692	6	0	6	94	0	logfile
✘	9B3K	44143	2025-01-14	2024-03-19	2.56	2.75	2.56	2.9	0.004	0.59	0.0	0.04	17.05	0.00	2.195	8.40	4.35	3.6	96.4	0.0	1.63	0.69	0.85	2.99	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6063	797	3	0	0	0	0	logfile
✘	9B3K	44143	2025-02-12	2024-03-19	2.56	2.75	2.56	2.9	0.004	0.59	0.0	0.04	17.05	0.00	2.195	8.40	4.35	3.6	96.4	0.0	1.63	0.69	0.85	2.99	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6063	797	3	0	0	0	0	logfile
✔	9B3K	44143	2025-03-11	2024-03-19	2.56	2.75	2.56	2.9	0.004	0.59	0.0	0.04	17.05	0.00	2.195	8.40	4.35	3.6	96.4	0.0	1.63	0.69	0.85	2.99	2.9	0.004	0.60	0.0	0.04	16.97	0.00	2.522	7.00	3.15	3.6	96.4	0.0	1.86	0.19	0.67	0.86	3.00	6063	797	3	0	0	0	0	logfile
✔	9B3K	44143	2024-12-27	2024-03-19	2.56	2.75	2.56	2.9	0.004	0.59	0.0	0.04	17.05	0.00	2.195	8.40	4.35	3.6	96.4	0.0	1.63	0.69	0.85	2.99	2.9	0.003	0.57	0.0	0.04	16.88	0.00	2.543	7.17	3.15	3.2	96.8	0.0	2.03	0.20	0.68	0.87	2.82	6063	797	3	0	0	0	0	logfile
✔	9B3K	44143	2025-05-10	2024-03-19	2.56	2.75	2.56	2.9	0.004	0.59	0.0	0.04	17.05	0.00	2.195	8.40	4.35	3.6	96.4	0.0	1.63	0.69	0.85	2.99	2.9	0.005	0.64	0.0	0.04	17.01	0.00	2.500	7.08	3.45	3.5	96.5	0.0	1.62	0.84	0.68	0.87	3.10	6063	797	3	0	0	0	0	logfile
✔	9B3K	44143	2025-04-28	2024-03-19	2.56	2.75	2.56	2.9	0.004	0.59	0.0	0.04	17.05	0.00	2.195	8.40	4.35	3.6	96.4	0.0	1.63	0.69	0.85	2.99	2.9	0.004	0.59	0.0	0.04	16.89	0.00	2.523	6.84	3.45	3.5	96.5	0.0	1.87	0.20	0.67	0.86	2.97	6063	797	3	0	0	0	0	logfile
✘	9B38	44131	2024-08-08	2024-03-18	3.36	3.64	3.42	3.6	0.008	1.30	0.0	0.08	20.14	0.01	2.270	4.66	0.76	9.0	90.6	0.4	-5.67	0.71	0.77	2.51	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	22670	2720	26	0	74	0	0	logfile
✘	9B38	44131	2024-09-29	2024-03-18	3.36	3.64	3.42	3.6	0.008	1.30	0.0	0.08	20.14	0.01	2.270	4.66	0.76	9.0	90.6	0.4	-5.67	0.71	0.77	2.51	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	22670	2720	26	0	74	0	0	logfile
✔	9B38	44131	2025-01-25	2024-03-18	3.36	3.64	3.42	3.6	0.008	1.30	0.0	0.08	20.14	0.01	2.270	4.66	0.76	9.0	90.6	0.4	-5.67	0.71	0.77	2.51	3.6	0.003	0.81	0.0	0.05	14.98	0.00	2.458	10.64	1.51	8.7	91.3	0.1	-1.53	2.82	0.75	0.82	2.22	22670	2720	26	0	74	0	0	logfile
✔	9B38	44131	2025-05-22	2024-03-18	3.36	3.64	3.43	3.6	0.008	1.38	0.0	0.08	20.14	0.01	2.270	4.66	0.76	9.0	90.6	0.4	-5.67	0.71	0.77	2.51	3.6	0.004	0.84	0.0	0.05	15.00	0.00	2.445	10.35	1.47	8.9	91.0	0.1	-1.58	2.82	0.76	0.82	2.27	22670	2720	26	0	74	0	0	logfile
✔	9B33	44124	2024-09-23	2024-03-18	4.07	4.25	4.00	4.2	0.007	1.56	0.0	0.08	13.12	0.01	2.141	8.98	0.49	23.2	75.3	1.5	-6.09	0.63	0.62	—	4.1	0.004	1.00	0.0	0.05	12.87	0.01	2.033	18.94	0.00	22.1	77.0	0.9	-4.65	1.21	0.69	0.69	—	3619	474	4	0	4	0	0	logfile
✔	9B33	44124	2024-08-02	2024-03-18	4.07	4.25	4.00	4.2	0.007	1.56	0.0	0.08	13.12	0.01	2.141	8.98	0.49	23.2	75.3	1.5	-6.09	0.63	0.62	—	4.1	0.004	1.00	0.0	0.05	12.87	0.01	2.033	18.94	0.00	22.1	77.0	0.9	-4.65	1.21	0.69	0.69	—	3619	474	4	0	4	0	0	logfile
✔	9B33	44124	2025-05-09	2024-03-18	4.07	4.25	3.97	4.2	0.007	1.56	0.0	0.08	13.12	0.01	2.141	8.98	0.49	23.2	75.3	1.5	-6.09	0.63	0.62	—	4.1	0.004	1.03	0.0	0.06	12.53	0.01	1.987	20.49	0.00	22.3	76.4	1.3	-4.67	1.20	0.68	0.68	—	3619	474	4	0	4	0	0	logfile
✔	9B33	44124	2025-04-26	2024-03-18	4.07	4.25	3.97	4.2	0.007	1.56	0.0	0.08	13.12	0.01	2.141	8.98	0.49	23.2	75.3	1.5	-6.09	0.63	0.62	—	4.1	0.006	1.09	0.0	0.06	12.75	0.01	1.914	24.55	0.00	23.2	76.0	0.9	-4.94	1.23	0.70	0.71	—	3619	474	4	0	4	0	0	logfile

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