Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8VGi	43201	2024-11-20	2023-12-27	2.7	3.68	2.86	3.3	0.011	1.16	0.0	0.07	13.30	0.01	2.029	4.48	0.70	6.5	93.2	0.3	-0.80	0.87	0.84	3.19	3.3	0.004	0.92	0.0	0.05	15.61	0.01	2.318	8.49	2.49	5.2	94.8	0.0	0.12	1.29	0.82	0.85	2.26	20482	2668	16	0	0	26	0	logfile
✔	8VGL	43204	2025-01-20	2023-12-27	2.6	3.17	2.55	3.0	0.003	0.54	0.0	0.04	13.65	0.01	2.239	3.99	0.62	5.2	94.6	0.2	-1.44	0.74	0.85	3.20	2.9	0.003	0.68	0.0	0.04	15.71	0.00	2.475	5.71	0.91	3.0	97.0	0.0	1.09	0.77	0.73	0.84	2.69	15622	1960	8	0	0	0	0	logfile
✔	8VGP	43220	2025-02-11	2023-12-27	2.7	3.48	2.69	3.2	0.010	1.02	0.0	0.06	14.34	0.02	2.148	2.04	0.91	5.0	94.8	0.2	-0.76	0.91	0.90	4.54	3.2	0.004	0.74	0.0	0.04	14.93	0.00	2.278	3.37	1.63	3.1	96.7	0.2	0.52	1.18	0.87	0.88	4.20	5046	648	6	0	1	43	0	logfile
✔	8VGL	43204	2024-11-18	2023-12-27	2.6	3.17	2.55	3.0	0.003	0.54	0.0	0.04	13.65	0.01	2.239	3.99	0.62	5.2	94.6	0.2	-1.44	0.74	0.85	3.20	2.9	0.003	0.67	0.0	0.04	15.93	0.00	2.468	5.94	0.85	2.7	97.3	0.0	1.15	0.77	0.73	0.84	2.54	15622	1960	8	0	0	0	0	logfile
✔	8VGL	43204	2024-12-31	2023-12-27	2.6	3.17	2.55	3.0	0.003	0.54	0.0	0.04	13.65	0.01	2.239	3.99	0.62	5.2	94.6	0.2	-1.44	0.74	0.85	3.20	2.9	0.003	0.67	0.0	0.04	15.93	0.00	2.468	5.94	0.85	2.7	97.3	0.0	1.15	0.77	0.73	0.84	2.54	15622	1960	8	0	0	0	0	logfile
✔	8VGM	43208	2024-12-31	2023-12-27	2.6	3.12	2.59	2.9	0.003	0.59	0.0	0.04	13.75	0.01	2.195	3.07	0.11	4.6	95.3	0.1	-1.27	0.73	0.86	3.18	2.9	0.004	0.71	0.0	0.04	16.06	0.00	2.382	7.79	1.76	2.5	97.4	0.1	1.25	1.21	0.73	0.85	2.42	15626	1962	8	0	0	0	0	logfile
✔	8VGM	43208	2024-11-18	2023-12-27	2.6	3.12	2.59	2.9	0.003	0.59	0.0	0.04	13.75	0.01	2.195	3.07	0.11	4.6	95.3	0.1	-1.27	0.73	0.86	3.18	2.9	0.004	0.71	0.0	0.04	16.06	0.00	2.382	7.79	1.76	2.5	97.4	0.1	1.25	1.21	0.73	0.85	2.42	15626	1962	8	0	0	0	0	logfile
✔	8VGM	43208	2025-01-20	2023-12-27	2.6	3.12	2.59	2.9	0.003	0.59	0.0	0.04	13.75	0.01	2.195	3.07	0.11	4.6	95.3	0.1	-1.27	0.73	0.86	3.18	2.9	0.004	0.71	0.0	0.04	16.13	0.00	2.379	7.79	1.70	2.6	97.3	0.1	1.32	1.21	0.73	0.86	2.67	15626	1962	8	0	0	0	0	logfile
✔	8VGH	43200	2024-11-20	2023-12-27	2.9	4.11	3.07	3.9	0.011	0.94	0.0	0.05	12.79	0.01	2.239	6.69	0.13	7.1	92.4	0.5	-1.33	0.82	0.82	3.38	3.9	0.004	0.81	0.0	0.05	15.64	0.01	2.409	8.17	2.40	3.9	96.1	0.0	0.11	0.77	0.82	0.82	2.75	20472	2668	12	0	0	0	0	logfile
✔	8XMJ	38479	2024-12-27	2023-12-27	4.18	4.63	4.20	4.4	0.004	0.66	0.0	0.05	24.61	0.00	1.932	8.98	0.00	5.2	94.8	0.0	2.35	0.56	0.76	—	4.4	0.002	0.56	0.0	0.04	13.02	0.00	2.023	7.31	0.00	4.9	95.0	0.2	2.16	0.97	0.61	0.80	—	4314	648	4	0	11	0	0	logfile
✔	8XMJ	38479	2024-11-14	2023-12-27	4.18	4.63	4.20	4.4	0.004	0.66	0.0	0.05	24.61	0.00	1.932	8.98	0.00	5.2	94.8	0.0	2.35	0.56	0.76	—	4.4	0.002	0.56	0.0	0.04	13.02	0.00	2.023	7.31	0.00	4.9	95.0	0.2	2.16	0.97	0.61	0.80	—	4314	648	4	0	11	0	0	logfile
✔	8VGT	43224	2025-01-14	2023-12-27	2.9	3.22	2.90	3.2	0.011	1.30	1.0	0.07	10.51	0.01	2.374	2.03	0.70	3.9	95.6	0.5	-0.41	0.68	0.77	5.20	3.2	0.005	0.69	0.0	0.05	14.33	0.00	2.535	4.28	3.26	2.9	97.1	0.0	-0.41	1.15	0.64	0.78	4.72	4714	629	4	0	5	0	0	logfile
✔	8VGT	43224	2024-06-24	2023-12-27	2.9	3.22	2.90	3.2	0.011	1.30	1.0	0.07	10.51	0.01	2.374	2.03	0.70	3.9	95.6	0.5	-0.41	0.68	0.77	5.20	3.2	0.003	0.61	0.0	0.05	14.07	0.00	2.233	4.62	2.56	2.9	97.1	0.0	-0.18	1.15	0.62	0.77	4.52	4714	629	4	0	5	0	0	logfile
✔	8VGT	43224	2025-02-11	2023-12-27	2.9	3.22	2.90	3.2	0.011	1.30	1.0	0.07	10.51	0.01	2.374	2.03	0.70	3.9	95.6	0.5	-0.41	0.68	0.77	5.20	3.2	0.005	0.69	0.0	0.05	14.33	0.00	2.535	4.28	3.26	2.9	97.1	0.0	-0.41	1.15	0.64	0.78	4.72	4714	629	4	0	5	0	0	logfile
✔	8VGT	43224	2024-07-18	2023-12-27	2.9	3.22	2.90	3.2	0.011	1.30	1.0	0.07	10.51	0.01	2.374	2.03	0.70	3.9	95.6	0.5	-0.41	0.68	0.77	5.20	3.2	0.003	0.61	0.0	0.05	14.07	0.00	2.233	4.62	2.56	2.9	97.1	0.0	-0.18	1.15	0.62	0.77	4.52	4714	629	4	0	5	0	0	logfile
✔	8VGT	43224	2025-03-06	2023-12-27	2.9	3.22	2.90	3.2	0.011	1.30	1.0	0.07	10.51	0.01	2.374	2.03	0.70	3.9	95.6	0.5	-0.41	0.68	0.77	5.20	3.2	0.005	0.69	0.0	0.05	14.29	0.01	2.541	4.28	3.49	3.2	96.8	0.0	-0.45	1.14	0.64	0.79	4.72	4714	629	4	0	5	0	0	logfile
✘	8VGT	43224	2024-08-02	2023-12-27	2.9	3.22	2.90	3.2	0.011	1.30	1.0	0.07	10.51	0.01	2.374	2.03	0.70	3.9	95.6	0.5	-0.41	0.68	0.77	5.20	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	4714	629	4	0	5	0	0	logfile
✔	8VGK	43203	2025-01-23	2023-12-27	2.4	3.44	2.61	3.1	0.005	1.04	0.0	0.06	13.84	0.01	2.099	3.12	0.65	7.0	92.3	0.6	-1.00	0.84	0.81	4.28	3.2	0.004	0.83	0.0	0.05	15.21	0.01	2.431	7.02	1.09	5.4	94.6	0.0	0.32	0.85	0.81	0.86	3.08	20567	2672	20	0	0	135	0	logfile
✘	8VGK	43203	2024-11-20	2023-12-27	2.4	3.44	2.61	3.1	0.005	1.04	0.0	0.06	13.84	0.01	2.099	3.12	0.65	7.0	92.3	0.6	-1.00	0.84	0.81	4.28	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	20567	2672	20	0	0	135	0	logfile
✔	8XMA	38469	2025-01-14	2023-12-27	2.65	3.10	2.82	3.1	0.004	0.63	0.0	0.04	23.46	0.00	1.957	7.89	0.00	1.4	98.6	0.0	3.44	0.54	0.76	3.01	3.1	0.002	0.46	0.0	0.04	16.74	0.00	1.961	6.47	3.67	1.0	99.0	0.0	3.90	0.59	0.54	0.78	2.65	4858	601	4	0	14	0	0	logfile

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