Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8YNK	39425	2025-05-17	2024-03-11	3.62	4.24	3.85	4.0	0.002	0.40	0.0	0.03	13.75	0.00	2.242	4.95	0.00	3.0	97.0	0.0	1.98	0.81	0.82	0.72	4.0	0.002	0.61	0.0	0.04	16.08	0.00	2.496	6.98	1.82	3.0	97.0	0.0	1.81	0.84	0.82	0.83	0.66	11564	1409	8	0	0	0	0	logfile
✔	8YNK	39425	2025-01-20	2024-03-11	3.62	4.24	3.85	4.0	0.002	0.40	0.0	0.03	13.75	0.00	2.242	4.95	0.00	3.0	97.0	0.0	1.98	0.81	0.82	0.72	4.0	0.002	0.61	0.0	0.04	16.08	0.00	2.496	6.98	1.82	3.0	97.0	0.0	1.81	0.84	0.82	0.83	0.66	11564	1409	8	0	0	0	0	logfile
✔	8YNK	39425	2024-11-18	2024-03-11	3.62	4.24	3.85	4.0	0.002	0.40	0.0	0.03	13.75	0.00	2.242	4.95	0.00	3.0	97.0	0.0	1.98	0.81	0.82	0.72	4.0	0.002	0.60	0.0	0.04	16.23	0.00	2.467	7.57	1.97	3.3	96.7	0.0	1.71	0.84	0.82	0.84	0.69	11564	1409	8	0	0	0	0	logfile
✔	8YNK	39425	2024-12-31	2024-03-11	3.62	4.24	3.85	4.0	0.002	0.40	0.0	0.03	13.75	0.00	2.242	4.95	0.00	3.0	97.0	0.0	1.98	0.81	0.82	0.72	4.0	0.002	0.60	0.0	0.04	16.23	0.00	2.467	7.57	1.97	3.3	96.7	0.0	1.71	0.84	0.82	0.84	0.69	11564	1409	8	0	0	0	0	logfile
✔	9AZL	44015	2025-01-17	2024-03-11	2.99	3.39	3.10	3.3	0.003	0.60	0.0	0.04	15.61	0.00	2.016	6.97	1.39	3.2	96.8	0.0	1.55	0.57	0.80	2.93	3.3	0.004	0.62	0.0	0.04	16.12	0.00	1.966	5.27	1.64	3.7	96.3	0.0	1.52	0.70	0.67	0.87	2.68	11252	1428	4	0	5	0	0	logfile
✔	8YNL	39426	2025-01-21	2024-03-11	3.55	4.16	3.78	4.0	0.002	0.39	0.0	0.03	13.83	0.00	2.280	5.24	0.00	1.9	98.1	0.0	1.87	0.80	0.83	0.94	4.0	0.002	0.57	0.0	0.04	16.21	0.00	2.407	6.55	1.35	3.1	96.9	0.0	1.64	2.03	0.81	0.84	0.67	12977	1583	9	0	0	0	0	logfile
✔	8YNL	39426	2025-05-18	2024-03-11	3.55	4.16	3.77	4.0	0.002	0.39	0.0	0.03	13.83	0.00	2.280	5.24	0.00	1.9	98.1	0.0	1.87	0.80	0.83	0.94	4.0	0.002	0.57	0.0	0.04	16.21	0.00	2.407	6.55	1.35	3.1	96.9	0.0	1.64	2.03	0.81	0.84	0.67	12977	1583	9	0	0	0	0	logfile
✔	8YNL	39426	2024-11-18	2024-03-11	3.55	4.16	3.78	4.0	0.002	0.39	0.0	0.03	13.83	0.00	2.280	5.24	0.00	1.9	98.1	0.0	1.87	0.80	0.83	0.94	4.0	0.002	0.57	0.0	0.04	16.30	0.00	2.408	6.18	1.22	2.9	97.1	0.0	1.68	2.03	0.81	0.84	0.65	12977	1583	9	0	0	0	0	logfile
✔	8YNL	39426	2024-12-31	2024-03-11	3.55	4.16	3.78	4.0	0.002	0.39	0.0	0.03	13.83	0.00	2.280	5.24	0.00	1.9	98.1	0.0	1.87	0.80	0.83	0.94	4.0	0.002	0.57	0.0	0.04	16.30	0.00	2.408	6.18	1.22	2.9	97.1	0.0	1.68	2.03	0.81	0.84	0.65	12977	1583	9	0	0	0	0	logfile
✔	9AZL	44015	2024-12-29	2024-03-11	2.99	3.39	3.10	3.3	0.003	0.60	0.0	0.04	15.61	0.00	2.016	6.97	1.39	3.2	96.8	0.0	1.55	0.57	0.80	2.93	3.3	0.003	0.57	0.0	0.04	16.12	0.00	1.986	5.36	1.55	3.6	96.4	0.0	1.69	0.69	0.64	0.85	2.58	11252	1428	4	0	5	0	0	logfile
✔	9AZL	44015	2024-11-16	2024-03-11	2.99	3.39	3.10	3.3	0.003	0.60	0.0	0.04	15.61	0.00	2.016	6.97	1.39	3.2	96.8	0.0	1.55	0.57	0.80	2.93	3.3	0.003	0.57	0.0	0.04	16.12	0.00	1.986	5.36	1.55	3.6	96.4	0.0	1.69	0.69	0.64	0.85	2.58	11252	1428	4	0	5	0	0	logfile
✔	9AZL	44015	2025-05-14	2024-03-11	2.99	3.39	3.11	3.3	0.003	0.60	0.0	0.04	15.61	0.00	2.016	6.97	1.39	3.2	96.8	0.0	1.55	0.57	0.80	2.93	3.3	0.004	0.62	0.0	0.04	16.12	0.00	1.966	5.27	1.64	3.7	96.3	0.0	1.52	0.70	0.67	0.87	2.68	11252	1428	4	0	5	0	0	logfile
✔	9B03	44026	2025-05-23	2024-03-11	2.95	3.69	—	3.2	0.005	0.96	0.0	0.06	13.38	0.01	2.097	1.93	0.00	3.0	97.0	0.0	-2.06	0.84	0.83	2.02	3.2	0.006	0.75	0.0	0.05	14.86	0.00	1.955	8.63	0.97	4.3	95.7	0.0	0.93	0.46	0.85	0.84	1.80	23896	3020	14	0	12	0	0	logfile
✘	9B03	44026	2024-08-08	2024-03-11	2.95	3.69	—	3.2	0.005	0.96	0.0	0.06	13.38	0.01	2.097	1.93	0.00	3.0	97.0	0.0	-2.06	0.84	0.83	2.02	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	23896	3020	14	0	12	0	0	logfile
✘	9B03	44026	2024-09-30	2024-03-11	2.95	3.69	—	3.2	0.005	0.96	0.0	0.06	13.38	0.01	2.097	1.93	0.00	3.0	97.0	0.0	-2.06	0.84	0.83	2.02	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	23896	3020	14	0	12	0	0	logfile
✔	9B03	44026	2025-01-25	2024-03-11	2.95	3.69	—	3.2	0.005	0.96	0.0	0.06	13.38	0.01	2.097	1.93	0.00	3.0	97.0	0.0	-2.06	0.84	0.83	2.02	3.2	0.006	0.75	0.0	0.05	14.86	0.00	1.955	8.63	0.97	4.3	95.7	0.0	0.93	0.46	0.85	0.84	1.80	23896	3020	14	0	12	0	0	logfile
✔	9EMC	19817	2024-09-27	2024-03-11	3.26	3.86	3.07	3.6	0.011	1.34	0.0	0.08	18.59	0.01	2.075	5.04	1.44	2.5	97.5	0.0	-3.73	0.75	0.68	0.35	3.6	0.004	0.77	1.0	0.04	17.63	0.00	1.938	6.26	1.62	2.6	97.4	0.0	1.41	1.14	0.82	0.90	1.95	15489	1977	12	0	12	0	0	logfile
✔	9EMC	19817	2024-12-31	2024-03-11	3.26	3.86	3.07	3.6	0.011	1.34	0.0	0.08	18.59	0.01	2.075	5.04	1.44	2.5	97.5	0.0	-3.73	0.75	0.68	0.35	3.6	0.004	0.77	1.0	0.04	17.63	0.00	1.938	6.26	1.62	2.6	97.4	0.0	1.41	1.14	0.82	0.90	1.95	15489	1977	12	0	12	0	0	logfile
✔	9AZQ	44019	2024-09-29	2024-03-11	3.82	5.23	—	4.3	0.005	0.88	1.0	0.05	15.04	0.01	2.075	2.67	0.00	3.2	96.8	0.0	-2.89	0.87	0.85	0.44	4.3	0.005	0.82	0.0	0.04	15.02	0.00	1.805	16.54	0.51	4.7	95.3	0.0	0.38	1.26	0.87	0.87	0.65	23563	2980	16	0	14	0	0	logfile
✔	9AZQ	44019	2024-08-08	2024-03-11	3.82	5.23	—	4.3	0.005	0.88	1.0	0.05	15.04	0.01	2.075	2.67	0.00	3.2	96.8	0.0	-2.89	0.87	0.85	0.44	4.3	0.005	0.82	0.0	0.04	15.02	0.00	1.805	16.54	0.51	4.7	95.3	0.0	0.38	1.26	0.87	0.87	0.65	23563	2980	16	0	14	0	0	logfile

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