Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9AZL	44015	2024-11-16	2024-03-11	2.99	3.39	3.10	3.3	0.003	0.60	0.0	0.04	15.61	0.00	2.016	6.97	1.39	3.2	96.8	0.0	1.55	0.57	0.80	2.93	3.3	0.003	0.57	0.0	0.04	16.12	0.00	1.986	5.36	1.55	3.6	96.4	0.0	1.69	0.69	0.64	0.85	2.58	11252	1428	4	0	5	0	0	logfile
✔	9AZL	44015	2025-05-14	2024-03-11	2.99	3.39	3.11	3.3	0.003	0.60	0.0	0.04	15.61	0.00	2.016	6.97	1.39	3.2	96.8	0.0	1.55	0.57	0.80	2.93	3.3	0.004	0.62	0.0	0.04	16.12	0.00	1.966	5.27	1.64	3.7	96.3	0.0	1.52	0.70	0.67	0.87	2.68	11252	1428	4	0	5	0	0	logfile
✔	9AZL	44015	2025-01-17	2024-03-11	2.99	3.39	3.10	3.3	0.003	0.60	0.0	0.04	15.61	0.00	2.016	6.97	1.39	3.2	96.8	0.0	1.55	0.57	0.80	2.93	3.3	0.004	0.62	0.0	0.04	16.12	0.00	1.966	5.27	1.64	3.7	96.3	0.0	1.52	0.70	0.67	0.87	2.68	11252	1428	4	0	5	0	0	logfile
✔	8YNK	39425	2025-05-17	2024-03-11	3.62	4.24	3.85	4.0	0.002	0.40	0.0	0.03	13.75	0.00	2.242	4.95	0.00	3.0	97.0	0.0	1.98	0.81	0.82	0.72	4.0	0.002	0.61	0.0	0.04	16.08	0.00	2.496	6.98	1.82	3.0	97.0	0.0	1.81	0.84	0.82	0.83	0.66	11564	1409	8	0	0	0	0	logfile
✔	8YNK	39425	2024-12-31	2024-03-11	3.62	4.24	3.85	4.0	0.002	0.40	0.0	0.03	13.75	0.00	2.242	4.95	0.00	3.0	97.0	0.0	1.98	0.81	0.82	0.72	4.0	0.002	0.60	0.0	0.04	16.23	0.00	2.467	7.57	1.97	3.3	96.7	0.0	1.71	0.84	0.82	0.84	0.69	11564	1409	8	0	0	0	0	logfile
✔	8YNK	39425	2025-01-20	2024-03-11	3.62	4.24	3.85	4.0	0.002	0.40	0.0	0.03	13.75	0.00	2.242	4.95	0.00	3.0	97.0	0.0	1.98	0.81	0.82	0.72	4.0	0.002	0.61	0.0	0.04	16.08	0.00	2.496	6.98	1.82	3.0	97.0	0.0	1.81	0.84	0.82	0.83	0.66	11564	1409	8	0	0	0	0	logfile
✔	8YNK	39425	2024-11-18	2024-03-11	3.62	4.24	3.85	4.0	0.002	0.40	0.0	0.03	13.75	0.00	2.242	4.95	0.00	3.0	97.0	0.0	1.98	0.81	0.82	0.72	4.0	0.002	0.60	0.0	0.04	16.23	0.00	2.467	7.57	1.97	3.3	96.7	0.0	1.71	0.84	0.82	0.84	0.69	11564	1409	8	0	0	0	0	logfile
✔	8YMS	39406	2025-05-17	2024-03-10	3.14	3.32	3.16	3.3	0.003	0.81	0.0	0.06	13.52	0.00	2.086	18.93	0.00	8.7	90.6	0.6	-2.03	0.49	0.65	2.94	3.3	0.003	0.69	0.0	0.05	15.77	0.00	2.309	11.59	1.12	7.9	91.7	0.5	-1.21	1.44	0.56	0.72	2.99	15975	1086	3	0	0	0	7173	logfile
✔	9AZ6	44013	2025-05-21	2024-03-10	2.98	3.75	2.88	3.3	0.004	0.68	0.0	0.04	15.39	0.00	1.887	10.08	0.75	0.9	99.1	0.0	1.17	0.74	0.82	2.74	3.3	0.004	0.75	0.0	0.04	16.21	0.00	1.930	9.35	1.41	1.4	98.6	0.0	1.60	0.92	0.75	0.88	2.45	21831	2803	18	0	10	0	0	logfile
✔	8YMT	39407	2025-05-17	2024-03-10	2.93	3.12	2.95	3.2	0.004	0.94	0.0	0.10	13.44	0.01	1.967	19.73	0.00	6.4	92.4	1.2	-2.25	0.59	0.72	3.19	3.2	0.003	0.84	3.0	0.10	15.88	0.00	2.411	13.19	1.22	6.3	92.6	1.1	-1.14	1.05	0.61	0.75	3.15	15975	1086	3	0	0	0	7173	logfile
✔	8YMR	39405	2025-05-17	2024-03-10	3.09	3.28	3.09	3.3	0.003	0.57	0.0	0.04	13.58	0.00	2.063	14.46	0.10	5.8	93.6	0.6	-1.67	0.61	0.78	3.63	3.3	0.004	0.62	0.0	0.04	15.51	0.00	2.395	9.64	1.63	6.5	93.0	0.6	-1.06	1.02	0.58	0.79	3.32	16041	1086	3	0	0	0	7239	logfile
✔	8YN3	39413	2025-03-12	2024-03-10	2.56	2.65	2.55	2.7	0.003	0.46	0.0	0.05	9.76	0.00	2.248	3.92	0.79	1.4	98.6	0.0	1.26	0.72	0.86	4.65	2.7	0.003	0.51	0.0	0.04	14.22	0.00	2.457	4.22	2.37	1.8	98.2	0.0	1.83	0.40	0.71	0.86	3.54	8201	1042	6	0	2	0	0	logfile
✔	8YN3	39413	2025-02-12	2024-03-10	2.56	2.65	2.55	2.7	0.003	0.46	0.0	0.05	9.76	0.00	2.248	3.92	0.79	1.4	98.6	0.0	1.26	0.72	0.86	4.65	2.7	0.002	0.50	0.0	0.04	14.19	0.00	2.459	4.22	1.81	2.1	97.9	0.0	1.79	0.40	0.71	0.86	3.53	8201	1042	6	0	2	0	0	logfile
✔	8YN3	39413	2025-01-15	2024-03-10	2.56	2.65	2.55	2.7	0.003	0.46	0.0	0.05	9.76	0.00	2.248	3.92	0.79	1.4	98.6	0.0	1.26	0.72	0.86	4.65	2.7	0.002	0.50	0.0	0.04	14.19	0.00	2.459	4.22	1.81	2.1	97.9	0.0	1.79	0.40	0.71	0.86	3.53	8201	1042	6	0	2	0	0	logfile
✔	8YN4	39414	2025-01-15	2024-03-10	2.97	3.15	2.94	3.1	0.002	0.40	0.0	0.04	8.47	0.00	2.276	4.44	0.33	1.1	98.9	0.0	1.49	0.67	0.81	3.52	3.1	0.005	0.64	0.0	0.04	14.59	0.00	2.475	7.13	3.51	2.3	97.7	0.0	1.53	1.24	0.68	0.82	3.29	8661	1127	6	0	2	0	0	logfile
✔	8YN4	39414	2025-02-13	2024-03-10	2.97	3.15	2.94	3.1	0.002	0.40	0.0	0.04	8.47	0.00	2.276	4.44	0.33	1.1	98.9	0.0	1.49	0.67	0.81	3.52	3.1	0.005	0.64	0.0	0.04	14.59	0.00	2.475	7.13	3.51	2.3	97.7	0.0	1.53	1.24	0.68	0.82	3.29	8661	1127	6	0	2	0	0	logfile
✔	8YN4	39414	2025-03-13	2024-03-10	2.97	3.15	2.95	3.1	0.002	0.40	0.0	0.04	8.47	0.00	2.276	4.44	0.33	1.1	98.9	0.0	1.49	0.67	0.81	3.52	3.1	0.005	0.64	0.0	0.05	14.67	0.00	2.478	7.13	3.07	2.3	97.7	0.0	1.51	1.63	0.68	0.82	3.38	8661	1127	6	0	2	0	0	logfile
✔	8YN4	39414	2024-12-28	2024-03-10	2.97	3.15	2.94	3.1	0.002	0.40	0.0	0.04	8.47	0.00	2.276	4.44	0.33	1.1	98.9	0.0	1.49	0.67	0.81	3.52	3.1	0.003	0.62	0.0	0.04	14.58	0.00	2.521	7.18	2.96	1.8	98.2	0.0	1.53	1.24	0.67	0.81	3.13	8661	1127	6	0	2	0	0	logfile
✔	8YN4	39414	2024-11-15	2024-03-10	2.97	3.15	2.94	3.1	0.002	0.40	0.0	0.04	8.47	0.00	2.276	4.44	0.33	1.1	98.9	0.0	1.49	0.67	0.81	3.52	3.1	0.003	0.62	0.0	0.04	14.58	0.00	2.521	7.18	2.96	1.8	98.2	0.0	1.53	1.24	0.67	0.81	3.13	8661	1127	6	0	2	0	0	logfile
✔	8YN3	39413	2025-05-11	2024-03-10	2.56	2.65	2.55	2.7	0.003	0.46	0.0	0.05	9.76	0.00	2.248	3.92	0.79	1.4	98.6	0.0	1.26	0.72	0.86	4.65	2.7	0.002	0.50	0.0	0.04	14.19	0.00	2.459	4.22	1.81	2.1	97.9	0.0	1.79	0.40	0.71	0.86	3.53	8201	1042	6	0	2	0	0	logfile

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