Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8XLN	38454	2024-12-29	2023-12-26	3.78	3.92	3.75	3.8	0.004	0.65	0.0	0.04	17.14	0.00	2.162	7.15	0.00	6.2	93.8	0.0	0.46	0.78	0.81	1.72	3.8	0.002	0.60	0.0	0.04	16.27	0.00	2.495	4.82	1.01	5.2	94.8	0.0	0.55	0.38	0.79	0.82	1.37	6593	789	8	0	15	0	0	logfile
✔	8XLN	38454	2025-01-17	2023-12-26	3.78	3.92	3.75	3.8	0.004	0.65	0.0	0.04	17.14	0.00	2.162	7.15	0.00	6.2	93.8	0.0	0.46	0.78	0.81	1.72	3.8	0.003	0.59	0.0	0.04	16.30	0.00	2.499	5.52	1.30	5.7	94.3	0.0	0.46	0.38	0.79	0.82	1.29	6593	789	8	0	15	0	0	logfile
✔	8XLN	38454	2024-11-16	2023-12-26	3.78	3.92	3.75	3.8	0.004	0.65	0.0	0.04	17.14	0.00	2.162	7.15	0.00	6.2	93.8	0.0	0.46	0.78	0.81	1.72	3.8	0.002	0.60	0.0	0.04	16.27	0.00	2.495	4.82	1.01	5.2	94.8	0.0	0.55	0.38	0.79	0.82	1.37	6593	789	8	0	15	0	0	logfile
✔	8XLN	38454	2024-10-11	2023-12-26	3.78	3.92	3.75	3.8	0.004	0.65	0.0	0.04	17.14	0.00	2.162	7.15	0.00	6.2	93.8	0.0	0.46	0.78	0.81	1.72	3.8	0.002	0.60	0.0	0.04	16.27	0.00	2.495	4.82	1.01	5.2	94.8	0.0	0.55	0.38	0.79	0.82	1.37	6593	789	8	0	15	0	0	logfile
✔	8XKY	38431	2025-01-20	2023-12-25	3.42	4.51	3.38	3.8	0.006	0.85	0.0	0.06	15.24	0.01	2.386	5.89	0.24	3.8	96.2	0.0	1.37	0.60	0.78	1.91	3.8	0.003	0.75	2.0	0.06	15.76	0.00	2.274	6.02	2.29	1.8	98.2	0.0	1.39	0.97	0.61	0.80	1.69	14928	968	10	0	0	0	7332	logfile
✔	8XKY	38431	2024-12-31	2023-12-25	3.42	4.51	3.38	3.8	0.006	0.85	0.0	0.06	15.24	0.01	2.386	5.89	0.24	3.8	96.2	0.0	1.37	0.60	0.78	1.91	3.9	0.003	0.76	2.0	0.06	15.81	0.00	2.343	6.36	2.41	2.2	97.8	0.0	1.28	1.48	0.61	0.80	1.62	14928	968	10	0	0	0	7332	logfile
✔	8XKX	38430	2024-12-31	2023-12-25	3.7	3.94	3.42	4.0	0.004	0.74	0.0	0.06	16.10	0.00	2.288	4.48	0.24	1.9	98.1	0.0	1.46	0.64	0.77	2.91	4.0	0.003	0.61	0.0	0.06	16.77	0.00	2.494	4.28	2.56	2.9	97.1	0.0	1.37	4.47	0.64	0.78	3.03	14858	958	10	0	0	0	7340	logfile
✔	8XKX	38430	2025-01-20	2023-12-25	3.7	3.94	3.42	4.0	0.004	0.74	0.0	0.06	16.10	0.00	2.288	4.48	0.24	1.9	98.1	0.0	1.46	0.64	0.77	2.91	4.0	0.003	0.62	0.0	0.06	16.90	0.00	2.304	4.42	3.78	3.0	97.0	0.0	1.26	4.47	0.64	0.78	2.83	14858	958	10	0	0	0	7340	logfile
✔	8XL7	38440	2024-12-26	2023-12-25	2.85	3.04	2.99	3.0	0.013	1.16	0.0	0.07	14.12	0.01	1.846	13.54	1.35	5.6	93.8	0.6	-2.21	0.75	0.82	2.82	3.0	0.004	0.69	0.0	0.05	16.55	0.00	1.745	6.81	1.89	4.2	95.7	0.0	0.03	1.70	0.75	0.86	2.75	44314	5704	22	0	12	0	0	logfile
✔	8XKW	38429	2025-01-20	2023-12-25	3.64	4.60	3.48	3.9	0.004	0.68	2.0	0.06	15.66	0.00	2.313	7.82	0.24	3.0	97.0	0.0	1.25	0.60	0.79	2.61	3.9	0.002	0.61	4.0	0.06	16.00	0.00	2.409	4.95	0.61	1.7	98.3	0.0	1.84	1.19	0.60	0.79	2.57	14702	960	10	0	0	0	7182	logfile
✔	8XL3	38436	2025-01-16	2023-12-25	3.02	3.27	3.23	3.3	0.010	1.02	0.0	0.06	11.38	0.01	2.212	7.86	1.54	2.8	96.6	0.6	-0.58	0.62	0.72	1.78	3.3	0.003	0.63	0.0	0.04	15.13	0.00	2.312	6.95	1.64	3.1	96.8	0.1	0.55	0.96	0.64	0.80	2.19	54204	7050	18	0	6	0	0	logfile
✔	8XL6	38439	2024-12-26	2023-12-25	2.29	2.41	2.37	2.4	0.011	1.00	0.0	0.06	13.28	0.01	2.245	6.01	0.51	4.7	95.1	0.2	-2.32	0.71	0.79	2.80	2.4	0.004	0.69	0.0	0.05	16.29	0.00	2.371	5.17	1.93	3.8	96.2	0.0	0.58	0.79	0.78	0.87	3.07	44612	5780	18	0	6	0	0	logfile
✔	8XKW	38429	2024-12-31	2023-12-25	3.64	4.60	3.48	3.9	0.004	0.68	2.0	0.06	15.66	0.00	2.313	7.82	0.24	3.0	97.0	0.0	1.25	0.60	0.79	2.61	3.9	0.002	0.60	4.0	0.06	15.98	0.00	2.390	5.48	0.73	1.9	98.1	0.0	1.87	0.53	0.60	0.79	2.74	14702	960	10	0	0	0	7182	logfile
✔	8XL3	38436	2024-12-29	2023-12-25	3.02	3.27	3.23	3.3	0.010	1.02	0.0	0.06	11.38	0.01	2.212	7.86	1.54	2.8	96.6	0.6	-0.58	0.62	0.72	1.78	3.3	0.003	0.64	0.0	0.04	15.12	0.00	2.450	7.42	1.73	3.3	96.6	0.1	0.41	1.44	0.64	0.81	2.26	54204	7050	18	0	6	0	0	logfile
✘	8XL3	38436	2024-11-20	2023-12-25	3.02	3.27	3.23	3.3	0.010	1.02	0.0	0.06	11.38	0.01	2.212	7.86	1.54	2.8	96.6	0.6	-0.58	0.62	0.72	1.78	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	54204	7050	18	0	6	0	0	logfile
✔	8XL1	38434	2024-11-19	2023-12-25	2.57	2.77	2.70	2.8	0.008	0.87	0.0	0.05	11.72	0.01	2.238	2.06	1.29	3.3	96.2	0.4	-0.45	0.59	0.63	2.32	2.8	0.003	0.67	0.0	0.04	15.26	0.00	2.433	7.49	1.83	4.3	95.7	0.0	0.57	1.33	0.67	0.76	1.99	18477	2285	4	0	2	0	0	logfile
✔	8XL4	38437	2024-12-28	2023-12-25	3.38	3.69	3.57	3.6	0.010	1.05	0.0	0.06	11.96	0.01	2.254	8.33	1.98	2.7	96.6	0.7	-0.32	0.70	0.72	1.86	3.6	0.003	0.66	0.0	0.04	14.55	0.00	2.368	8.30	1.79	3.2	96.7	0.1	0.69	1.43	0.73	0.81	1.72	50434	6521	23	0	11	0	0	logfile
✔	8XL1	38434	2025-01-22	2023-12-25	2.57	2.77	2.70	2.8	0.008	0.87	0.0	0.05	11.72	0.01	2.238	2.06	1.29	3.3	96.2	0.4	-0.45	0.59	0.63	2.32	2.8	0.003	0.66	0.0	0.04	15.38	0.00	2.453	7.11	1.48	4.2	95.8	0.0	0.54	1.34	0.68	0.77	2.15	18477	2285	4	0	2	0	0	logfile
✔	8XL4	38437	2025-01-15	2023-12-25	3.38	3.69	3.57	3.6	0.010	1.05	0.0	0.06	11.96	0.01	2.254	8.33	1.98	2.7	96.6	0.7	-0.32	0.70	0.72	1.86	3.6	0.005	0.71	0.0	0.05	14.70	0.00	2.371	9.49	2.13	4.0	95.9	0.1	0.28	0.97	0.74	0.82	1.80	50434	6521	23	0	11	0	0	logfile
✔	8XL4	38437	2024-11-19	2023-12-25	3.38	3.69	3.57	3.6	0.010	1.05	0.0	0.06	11.96	0.01	2.254	8.33	1.98	2.7	96.6	0.7	-0.32	0.70	0.72	1.86	3.6	0.003	0.66	0.0	0.04	14.55	0.00	2.368	8.30	1.79	3.2	96.7	0.1	0.69	1.43	0.73	0.81	1.72	50434	6521	23	0	11	0	0	logfile

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