Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8RK4	19259	2025-01-15	2023-12-23	4.74	6.78	6.17	3.7	0.003	0.72	0.0	0.05	11.12	0.00	0.995	21.20	0.00	4.0	95.7	0.3	-1.38	0.94	0.75	—	3.8	0.002	0.67	0.0	0.04	11.73	0.00	2.474	8.31	0.00	7.4	92.4	0.3	-1.77	0.86	0.94	0.77	—	8373	1119	3	0	0	0	0	logfile
✔	8RK4	19259	2025-02-12	2023-12-23	4.74	6.78	6.17	3.7	0.003	0.72	0.0	0.05	11.12	0.00	0.995	21.20	0.00	4.0	95.7	0.3	-1.38	0.94	0.75	—	3.8	0.002	0.67	0.0	0.04	11.73	0.00	2.474	8.31	0.00	7.4	92.4	0.3	-1.77	0.86	0.94	0.77	—	8373	1119	3	0	0	0	0	logfile
✔	8RK4	19259	2024-09-24	2023-12-23	4.74	6.78	6.17	3.7	0.003	0.72	0.0	0.05	11.12	0.00	0.920	21.20	0.00	4.0	95.7	0.3	-1.38	0.94	0.75	—	3.8	0.002	0.65	0.0	0.04	11.91	0.00	2.570	9.10	0.00	4.0	95.7	0.3	-0.96	0.95	0.94	0.72	—	8373	1119	3	0	0	0	0	logfile
✔	8RK9	19265	2024-09-23	2023-12-23	3.95	3.73	3.78	20.0	0.002	0.67	0.0	0.05	15.38	0.00	2.268	15.65	0.00	12.8	87.2	0.0	-3.79	0.16	0.00	1.69	7.8	0.003	0.77	0.0	0.05	16.84	0.01	2.538	15.49	3.53	7.1	92.9	0.0	-3.47	4.08	0.30	0.09	0.60	6138	816	6	0	0	0	0	logfile
✔	8RK0	19254	2024-09-24	2023-12-22	3.38	4.52	3.57	4.1	0.005	0.92	0.0	0.06	23.31	0.01	2.111	16.47	0.14	12.9	87.1	0.0	-2.41	0.73	0.81	1.31	4.1	0.003	0.83	0.0	0.05	14.18	0.01	2.272	11.92	5.10	12.7	87.3	0.0	-2.24	0.40	0.73	0.81	1.22	6940	812	24	0	46	0	0	logfile
✔	8VG1	43197	2024-12-30	2023-12-22	2.48	3.12	2.46	2.9	0.005	0.68	0.0	0.04	26.21	0.00	2.351	0.69	0.51	1.3	98.6	0.1	2.20	0.82	0.85	3.37	2.9	0.005	0.61	0.0	0.04	27.92	0.00	2.435	4.68	1.91	1.8	98.1	0.1	2.38	0.30	0.82	0.85	3.17	14434	930	13	342	1	0	0	logfile
✔	8XJX	38409	2025-01-17	2023-12-22	2.78	2.97	2.78	3.0	0.003	0.60	0.0	0.04	16.49	0.00	1.742	7.01	0.16	4.5	95.2	0.3	-0.23	0.63	0.73	2.21	3.0	0.003	0.57	0.0	0.04	19.25	0.00	2.039	7.01	3.12	6.0	93.9	0.1	-0.11	1.32	0.71	0.79	1.85	6311	693	6	32	1	27	0	logfile
✔	8XK4	38415	2025-02-14	2023-12-22	2.94	3.11	2.95	3.1	0.004	0.63	0.0	0.05	15.22	0.00	1.749	7.92	0.00	3.7	96.0	0.3	-1.05	0.62	0.75	2.72	3.1	0.005	0.69	0.0	0.05	18.27	0.00	1.954	7.66	1.82	4.8	95.2	0.0	-0.77	1.06	0.71	0.82	2.86	6048	689	8	22	3	2	0	logfile
✔	8XK4	38415	2025-01-17	2023-12-22	2.94	3.11	2.95	3.1	0.004	0.63	0.0	0.05	15.22	0.00	1.749	7.92	0.00	3.7	96.0	0.3	-1.05	0.62	0.75	2.72	3.1	0.005	0.69	0.0	0.05	18.27	0.00	1.954	7.66	1.82	4.8	95.2	0.0	-0.77	1.06	0.71	0.82	2.86	6048	689	8	22	3	2	0	logfile
✔	8VG1	43197	2024-11-17	2023-12-22	2.48	3.12	2.46	2.9	0.005	0.68	0.0	0.04	26.21	0.00	2.351	0.69	0.51	1.3	98.6	0.1	2.20	0.82	0.85	3.37	2.9	0.005	0.61	0.0	0.04	27.92	0.00	2.435	4.68	1.91	1.8	98.1	0.1	2.38	0.30	0.82	0.85	3.17	14434	930	13	342	1	0	0	logfile
✔	8VG1	43197	2024-10-13	2023-12-22	2.48	3.12	2.46	2.9	0.005	0.68	0.0	0.04	26.21	0.00	2.351	0.69	0.51	1.3	98.6	0.1	2.20	0.82	0.85	3.37	2.9	0.005	0.61	0.0	0.04	27.92	0.00	2.435	4.68	1.91	1.8	98.1	0.1	2.38	0.30	0.82	0.85	3.17	14434	930	13	342	1	0	0	logfile
✔	8VG1	43197	2024-09-26	2023-12-22	2.48	3.12	2.46	2.9	0.005	0.68	0.0	0.04	26.21	0.00	2.351	0.69	0.51	1.3	98.6	0.1	2.20	0.82	0.85	3.37	2.9	0.005	0.61	0.0	0.04	27.92	0.00	2.435	4.68	1.91	1.8	98.1	0.1	2.38	0.30	0.82	0.85	3.17	14434	930	13	342	1	0	0	logfile
✔	8VG1	43197	2025-01-19	2023-12-22	2.48	3.12	2.46	2.9	0.005	0.68	0.0	0.04	26.21	0.00	2.351	0.69	0.51	1.3	98.6	0.1	2.20	0.82	0.85	3.37	2.9	0.006	0.61	0.0	0.04	27.88	0.00	2.465	4.68	1.66	1.8	98.1	0.1	2.35	0.33	0.82	0.85	3.01	14434	930	13	342	1	0	0	logfile
✔	8RK0	19254	2024-12-27	2023-12-22	3.38	4.52	3.57	4.1	0.005	0.92	0.0	0.06	23.31	0.01	2.111	16.47	0.14	12.9	87.1	0.0	-2.41	0.73	0.81	1.31	4.1	0.003	0.83	0.0	0.05	14.18	0.01	2.272	11.92	5.10	12.7	87.3	0.0	-2.24	0.40	0.73	0.81	1.22	6940	812	24	0	46	0	0	logfile
✔	8RK0	19254	2024-11-14	2023-12-22	3.38	4.52	3.57	4.1	0.005	0.92	0.0	0.06	23.31	0.01	2.111	16.47	0.14	12.9	87.1	0.0	-2.41	0.73	0.81	1.31	4.1	0.003	0.83	0.0	0.05	14.18	0.01	2.272	11.92	5.10	12.7	87.3	0.0	-2.24	0.40	0.73	0.81	1.22	6940	812	24	0	46	0	0	logfile
✔	8RK0	19254	2024-10-10	2023-12-22	3.38	4.52	3.57	4.1	0.005	0.92	0.0	0.06	23.31	0.01	2.111	16.47	0.14	12.9	87.1	0.0	-2.41	0.73	0.81	1.31	4.1	0.003	0.83	0.0	0.05	14.18	0.01	2.272	11.92	5.10	12.7	87.3	0.0	-2.24	0.40	0.73	0.81	1.22	6940	812	24	0	46	0	0	logfile
✔	8XK0	38412	2024-12-29	2023-12-22	2.96	3.16	2.95	3.1	0.003	0.60	0.0	0.05	16.44	0.00	2.023	5.87	0.16	6.3	93.4	0.3	-0.69	0.72	0.81	3.31	3.2	0.003	0.62	0.0	0.04	18.33	0.00	2.087	6.61	0.99	4.8	94.8	0.4	-0.31	0.37	0.74	0.86	2.72	6302	692	6	32	2	22	0	logfile
✔	8RK0	19254	2025-03-12	2023-12-22	3.38	4.52	3.56	4.1	0.005	0.92	0.0	0.06	23.31	0.01	2.111	16.47	0.14	12.9	87.1	0.0	-2.41	0.73	0.81	1.31	4.1	0.003	0.84	0.0	0.05	14.34	0.01	2.275	12.22	3.82	12.6	87.4	0.0	-2.26	0.40	0.73	0.81	1.32	6940	812	24	0	46	0	0	logfile
✔	8RK0	19254	2025-02-12	2023-12-22	3.38	4.52	3.57	4.1	0.005	0.92	0.0	0.06	23.31	0.01	2.111	16.47	0.14	12.9	87.1	0.0	-2.41	0.73	0.81	1.31	4.1	0.004	0.86	0.0	0.05	14.21	0.01	2.253	13.34	5.24	12.9	87.1	0.0	-2.32	0.40	0.73	0.82	1.38	6940	812	24	0	46	0	0	logfile
✔	8RK0	19254	2025-01-14	2023-12-22	3.38	4.52	3.57	4.1	0.005	0.92	0.0	0.06	23.31	0.01	2.111	16.47	0.14	12.9	87.1	0.0	-2.41	0.73	0.81	1.31	4.1	0.004	0.86	0.0	0.05	14.21	0.01	2.253	13.34	5.24	12.9	87.1	0.0	-2.32	0.40	0.73	0.82	1.38	6940	812	24	0	46	0	0	logfile

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