Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8VFX	43193	2024-10-13	2023-12-22	2.65	3.26	2.73	3.1	0.005	0.64	0.0	0.04	24.47	0.00	2.067	1.29	0.39	1.8	98.2	0.0	2.04	0.80	0.83	4.19	3.1	0.004	0.61	0.0	0.04	26.77	0.00	2.507	5.11	2.22	1.8	98.2	0.0	2.06	0.42	0.84	0.87	3.45	16124	1222	12	316	0	0	0	logfile
✔	8VFX	43193	2024-12-31	2023-12-22	2.65	3.26	2.73	3.1	0.005	0.64	0.0	0.04	24.47	0.00	2.067	1.29	0.39	1.8	98.2	0.0	2.04	0.80	0.83	4.19	3.1	0.004	0.61	0.0	0.04	26.77	0.00	2.507	5.11	2.22	1.8	98.2	0.0	2.06	0.42	0.84	0.87	3.45	16124	1222	12	316	0	0	0	logfile
✔	8VFX	43193	2024-11-18	2023-12-22	2.65	3.26	2.73	3.1	0.005	0.64	0.0	0.04	24.47	0.00	2.067	1.29	0.39	1.8	98.2	0.0	2.04	0.80	0.83	4.19	3.1	0.004	0.61	0.0	0.04	26.77	0.00	2.507	5.11	2.22	1.8	98.2	0.0	2.06	0.42	0.84	0.87	3.45	16124	1222	12	316	0	0	0	logfile
✔	8VFX	43193	2025-01-20	2023-12-22	2.65	3.26	2.73	3.1	0.005	0.64	0.0	0.04	24.47	0.00	2.067	1.29	0.39	1.8	98.2	0.0	2.04	0.80	0.83	4.19	3.1	0.005	0.60	0.0	0.04	26.62	0.00	2.550	5.21	1.25	2.0	98.0	0.0	2.21	0.45	0.84	0.87	3.43	16124	1222	12	316	0	0	0	logfile
✔	8VFX	43193	2024-09-27	2023-12-22	2.65	3.26	2.73	3.1	0.005	0.64	0.0	0.04	24.47	0.00	2.067	1.29	0.39	1.8	98.2	0.0	2.04	0.80	0.83	4.19	3.1	0.004	0.61	0.0	0.04	26.77	0.00	2.507	5.11	2.22	1.8	98.2	0.0	2.06	0.42	0.84	0.87	3.45	16124	1222	12	316	0	0	0	logfile
✔	8XJX	38409	2025-01-17	2023-12-22	2.78	2.97	2.78	3.0	0.003	0.60	0.0	0.04	16.49	0.00	1.742	7.01	0.16	4.5	95.2	0.3	-0.23	0.63	0.73	2.21	3.0	0.003	0.57	0.0	0.04	19.25	0.00	2.039	7.01	3.12	6.0	93.9	0.1	-0.11	1.32	0.71	0.79	1.85	6311	693	6	32	1	27	0	logfile
✔	8XJS	38404	2025-01-17	2023-12-22	3.24	3.95	3.26	3.5	0.005	0.71	0.0	0.05	15.75	0.00	2.216	13.52	1.29	5.2	94.6	0.1	-0.54	0.78	0.76	2.35	3.5	0.003	0.59	0.0	0.04	15.77	0.00	2.525	7.03	1.85	4.2	95.7	0.1	-0.18	0.54	0.81	0.85	2.22	11178	1385	5	0	0	0	0	logfile
✔	8XJW	38408	2024-12-29	2023-12-22	2.84	3.04	2.80	3.0	0.003	0.58	0.0	0.04	16.62	0.00	2.132	9.85	0.00	5.6	94.3	0.1	-0.92	0.66	0.71	2.16	3.0	0.003	0.63	0.0	0.04	19.06	0.00	2.070	8.53	2.15	6.1	93.9	0.0	-0.55	0.94	0.69	0.77	2.31	6248	690	5	31	1	6	0	logfile
✔	8XJS	38404	2024-12-29	2023-12-22	3.24	3.95	3.26	3.5	0.005	0.71	0.0	0.05	15.75	0.00	2.216	13.52	1.29	5.2	94.6	0.1	-0.54	0.78	0.76	2.35	3.5	0.005	0.64	0.0	0.05	15.87	0.00	2.523	8.94	1.61	5.2	94.8	0.1	-0.36	0.87	0.80	0.82	2.13	11178	1385	5	0	0	0	0	logfile
✔	8VFZ	43195	2024-09-27	2023-12-22	4.1	4.63	4.39	4.2	0.005	0.68	0.0	0.04	25.93	0.01	2.063	1.78	1.20	2.0	97.7	0.3	3.06	0.82	0.78	—	4.2	0.008	0.86	0.0	0.05	27.59	0.01	2.337	24.55	0.00	4.5	95.3	0.2	0.35	2.79	0.84	0.83	—	14906	984	12	342	0	0	0	logfile
✔	8VFZ	43195	2024-10-13	2023-12-22	4.1	4.63	4.39	4.2	0.005	0.68	0.0	0.04	25.93	0.01	2.063	1.78	1.20	2.0	97.7	0.3	3.06	0.82	0.78	—	4.2	0.008	0.86	0.0	0.05	27.59	0.01	2.337	24.55	0.00	4.5	95.3	0.2	0.35	2.79	0.84	0.83	—	14906	984	12	342	0	0	0	logfile
✘	8VFZ	43195	2024-11-17	2023-12-22	4.1	4.63	4.39	4.2	0.005	0.68	0.0	0.04	25.93	0.01	2.063	1.78	1.20	2.0	97.7	0.3	3.06	0.82	0.78	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	14906	984	12	342	0	0	0	logfile
✔	8VFZ	43195	2024-12-31	2023-12-22	4.1	4.63	4.39	4.2	0.005	0.68	0.0	0.04	25.93	0.01	2.063	1.78	1.20	2.0	97.7	0.3	3.06	0.82	0.78	—	4.2	0.008	0.86	0.0	0.05	27.59	0.01	2.337	24.55	0.00	4.5	95.3	0.2	0.35	2.79	0.84	0.83	—	14906	984	12	342	0	0	0	logfile
✔	8VFV	43190	2024-08-07	2023-12-22	3.3	3.51	3.33	3.5	0.007	1.20	1.0	0.06	13.91	0.01	1.702	2.86	0.27	2.3	97.7	0.0	1.14	0.69	0.84	3.76	3.5	0.004	0.90	1.0	0.04	14.07	0.00	1.985	8.21	2.75	3.5	96.4	0.0	0.33	0.49	0.71	0.86	3.28	21240	2607	29	0	72	0	0	logfile
✔	8VFV	43190	2024-07-23	2023-12-22	3.3	3.51	3.33	3.5	0.007	1.20	1.0	0.06	13.91	0.01	1.702	2.86	0.27	2.3	97.7	0.0	1.14	0.69	0.84	3.76	3.5	0.004	0.75	0.0	0.04	13.98	0.00	1.546	10.62	2.71	3.3	96.7	0.1	0.38	0.49	0.71	0.86	3.28	21240	2607	29	0	72	0	0	logfile
✔	8VFV	43190	2024-06-30	2023-12-22	3.3	3.51	3.33	3.5	0.007	1.20	1.0	0.06	13.91	0.01	1.702	2.86	0.27	2.3	97.7	0.0	1.14	0.69	0.84	3.76	3.5	0.004	0.75	0.0	0.04	13.98	0.00	1.546	10.62	2.71	3.3	96.7	0.1	0.38	0.49	0.71	0.86	3.28	21240	2607	29	0	72	0	0	logfile
✔	8VFV	43190	2025-01-24	2023-12-22	3.3	3.51	3.33	3.5	0.007	1.20	1.0	0.06	13.91	0.01	1.702	2.86	0.27	2.3	97.7	0.0	1.14	0.69	0.84	3.76	3.5	0.005	0.90	2.0	0.04	14.04	0.00	2.039	7.94	2.88	3.6	96.4	0.0	0.36	0.48	0.71	0.86	3.42	21240	2607	29	0	72	0	0	logfile
✔	8VFZ	43195	2025-01-20	2023-12-22	4.1	4.63	4.39	4.2	0.005	0.68	0.0	0.04	25.93	0.01	2.063	1.78	1.20	2.0	97.7	0.3	3.06	0.82	0.78	—	4.2	0.004	0.69	0.0	0.04	27.08	0.01	2.420	14.46	0.00	3.4	96.4	0.2	1.04	2.78	0.83	0.82	—	14906	984	12	342	0	0	0	logfile
✘	8VFV	43190	2024-11-20	2023-12-22	3.3	3.51	3.33	3.5	0.007	1.20	1.0	0.06	13.91	0.01	1.702	2.86	0.27	2.3	97.7	0.0	1.14	0.69	0.84	3.76	—	—	—	—	—	—	—	—	—	—	—	—	—	0.33	—	—	—	3.28	21240	2607	29	0	72	0	0	logfile
✔	8VFV	43190	2024-09-29	2023-12-22	3.3	3.51	3.33	3.5	0.007	1.20	1.0	0.06	13.91	0.01	1.702	2.86	0.27	2.3	97.7	0.0	1.14	0.69	0.84	3.76	3.5	0.004	0.90	1.0	0.04	14.07	0.00	1.985	8.21	2.75	3.5	96.4	0.0	0.33	0.49	0.71	0.86	3.28	21240	2607	29	0	72	0	0	logfile

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