Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9EMA	19815	2025-01-20	2024-03-07	2.4	2.98	2.39	2.8	0.008	1.07	0.0	0.06	18.26	0.01	1.999	1.44	0.42	1.3	98.6	0.1	-0.24	0.80	0.76	1.87	2.7	0.003	0.51	0.0	0.04	18.16	0.00	1.906	3.92	0.66	2.1	97.9	0.0	1.76	1.41	0.86	0.92	3.94	15562	1974	12	0	13	0	0	logfile
✔	9EMA	19815	2025-05-17	2024-03-07	2.4	2.98	2.39	2.8	0.008	1.07	0.0	0.06	18.26	0.01	1.999	1.44	0.42	1.3	98.6	0.1	-0.24	0.80	0.76	1.87	2.7	0.003	0.51	0.0	0.04	18.16	0.00	1.906	3.92	0.66	2.1	97.9	0.0	1.76	1.41	0.86	0.92	3.94	15562	1974	12	0	13	0	0	logfile
✔	9EMA	19815	2024-08-06	2024-03-07	2.4	2.98	2.39	2.8	0.008	1.07	0.0	0.06	18.26	0.01	1.999	1.44	0.42	1.3	98.6	0.1	-0.24	0.80	0.76	1.87	2.7	0.002	0.51	0.0	0.04	18.07	0.00	1.965	3.99	0.48	2.0	98.0	0.0	1.70	1.41	0.86	0.92	4.03	15562	1974	12	0	13	0	0	logfile
✔	9EMA	19815	2024-09-27	2024-03-07	2.4	2.98	2.39	2.8	0.008	1.07	0.0	0.06	18.26	0.01	1.999	1.44	0.42	1.3	98.6	0.1	-0.24	0.80	0.76	1.87	2.7	0.002	0.51	0.0	0.04	18.07	0.00	1.965	3.99	0.48	2.0	98.0	0.0	1.70	1.41	0.86	0.92	4.03	15562	1974	12	0	13	0	0	logfile
✔	9AYB	43984	2025-04-26	2024-03-07	3.19	3.65	3.19	3.6	0.003	0.52	0.0	0.04	12.73	0.00	2.313	2.08	0.57	0.9	99.1	0.0	1.23	0.44	0.79	2.78	3.6	0.003	0.54	0.0	0.04	14.20	0.00	2.610	3.57	1.70	1.4	98.6	0.0	1.89	0.32	0.43	0.79	2.06	3347	428	1	0	0	0	0	logfile
✔	9AYB	43984	2025-03-05	2024-03-07	3.19	3.65	3.19	3.6	0.003	0.52	0.0	0.04	12.73	0.00	2.313	2.08	0.57	0.9	99.1	0.0	1.23	0.44	0.79	2.78	3.6	0.003	0.54	0.0	0.04	14.20	0.00	2.610	3.57	1.70	1.4	98.6	0.0	1.89	0.32	0.43	0.79	2.06	3347	428	1	0	0	0	0	logfile
✔	9EM7	19812	2024-09-25	2024-03-07	3.6	4.42	3.88	4.0	0.001	0.36	0.0	0.04	8.21	0.00	1.964	4.68	0.15	1.6	98.4	0.0	2.73	0.87	0.74	0.77	4.0	0.002	0.47	0.0	0.03	12.87	0.00	2.354	35.00	1.25	1.9	98.1	0.0	2.71	0.92	0.90	0.83	0.60	57048	6336	8	0	0	0	6176	logfile
✔	9EM8	19813	2024-12-29	2024-03-07	4.1	4.53	4.13	4.3	0.002	0.38	0.0	0.03	9.41	0.00	1.973	6.95	0.44	1.8	98.2	0.0	1.61	0.80	0.62	—	4.3	0.002	0.48	0.0	0.03	12.30	0.00	2.167	43.70	0.00	3.2	96.8	0.0	1.97	3.34	0.86	0.76	—	57040	6336	8	0	0	0	6168	logfile
✔	9EM8	19813	2024-10-11	2024-03-07	4.1	4.53	4.13	4.3	0.002	0.38	0.0	0.03	9.41	0.00	1.973	6.95	0.44	1.8	98.2	0.0	1.61	0.80	0.62	—	4.3	0.002	0.48	0.0	0.03	12.30	0.00	2.167	43.70	0.00	3.2	96.8	0.0	1.97	3.34	0.86	0.76	—	57040	6336	8	0	0	0	6168	logfile
✔	9EM8	19813	2024-09-25	2024-03-07	4.1	4.53	4.13	4.3	0.002	0.38	0.0	0.03	9.41	0.00	1.973	6.95	0.44	1.8	98.2	0.0	1.61	0.80	0.62	—	4.3	0.002	0.48	0.0	0.03	12.38	0.00	2.165	44.49	0.00	3.4	96.6	0.0	1.90	3.24	0.86	0.75	—	57040	6336	8	0	0	0	6168	logfile
✔	9EM8	19813	2025-01-17	2024-03-07	4.1	4.53	4.13	4.3	0.002	0.38	0.0	0.03	9.41	0.00	1.973	6.95	0.44	1.8	98.2	0.0	1.61	0.80	0.62	—	4.3	0.003	0.52	0.0	0.04	12.22	0.00	2.137	44.86	0.00	3.4	96.6	0.0	2.07	3.23	0.86	0.76	—	57040	6336	8	0	0	0	6168	logfile
✔	9EM7	19812	2024-12-29	2024-03-07	3.6	4.42	3.88	4.0	0.001	0.36	0.0	0.04	8.21	0.00	1.964	4.68	0.15	1.6	98.4	0.0	2.73	0.87	0.74	0.77	4.0	0.002	0.47	0.0	0.03	12.76	0.00	2.331	34.54	0.91	1.9	98.1	0.0	2.80	0.93	0.90	0.83	0.57	57048	6336	8	0	0	0	6176	logfile
✔	9EM7	19812	2024-10-11	2024-03-07	3.6	4.42	3.88	4.0	0.001	0.36	0.0	0.04	8.21	0.00	1.964	4.68	0.15	1.6	98.4	0.0	2.73	0.87	0.74	0.77	4.0	0.002	0.47	0.0	0.03	12.76	0.00	2.331	34.54	0.91	1.9	98.1	0.0	2.80	0.93	0.90	0.83	0.57	57048	6336	8	0	0	0	6176	logfile
✔	9EM7	19812	2025-01-17	2024-03-07	3.6	4.42	3.88	4.0	0.001	0.36	0.0	0.04	8.21	0.00	1.964	4.68	0.15	1.6	98.4	0.0	2.73	0.87	0.74	0.77	4.0	0.004	0.57	0.0	0.04	12.93	0.00	2.323	39.46	1.63	3.6	96.4	0.0	1.79	0.96	0.90	0.83	0.67	57048	6336	8	0	0	0	6176	logfile
✔	8YLU	39391	2024-10-12	2024-03-06	2.8	3.09	2.94	3.1	0.003	0.51	0.0	0.04	20.36	0.00	2.152	6.37	0.89	3.1	96.9	0.0	-0.03	0.65	0.82	3.48	3.1	0.003	0.53	0.0	0.04	20.47	0.00	2.441	5.26	1.95	3.5	96.5	0.0	0.06	0.21	0.65	0.82	3.25	11441	1308	7	44	1	0	0	logfile
✔	8YLU	39391	2025-05-14	2024-03-06	2.8	3.09	2.94	3.1	0.003	0.51	0.0	0.04	20.36	0.00	2.152	6.37	0.89	3.1	96.9	0.0	-0.03	0.65	0.82	3.48	3.1	0.003	0.53	0.0	0.04	20.43	0.00	2.430	5.17	1.86	3.3	96.7	0.0	0.06	0.21	0.65	0.82	3.13	11441	1308	7	44	1	0	0	logfile
✔	8YLU	39391	2025-01-17	2024-03-06	2.8	3.09	2.94	3.1	0.003	0.51	0.0	0.04	20.36	0.00	2.152	6.37	0.89	3.1	96.9	0.0	-0.03	0.65	0.82	3.48	3.1	0.003	0.53	0.0	0.04	20.43	0.00	2.430	5.17	1.86	3.3	96.7	0.0	0.06	0.21	0.65	0.82	3.13	11441	1308	7	44	1	0	0	logfile
✔	8YLU	39391	2024-12-29	2024-03-06	2.8	3.09	2.94	3.1	0.003	0.51	0.0	0.04	20.36	0.00	2.152	6.37	0.89	3.1	96.9	0.0	-0.03	0.65	0.82	3.48	3.1	0.003	0.53	0.0	0.04	20.47	0.00	2.441	5.26	1.95	3.5	96.5	0.0	0.06	0.21	0.65	0.82	3.25	11441	1308	7	44	1	0	0	logfile
✔	8YLU	39391	2024-11-16	2024-03-06	2.8	3.09	2.94	3.1	0.003	0.51	0.0	0.04	20.36	0.00	2.152	6.37	0.89	3.1	96.9	0.0	-0.03	0.65	0.82	3.48	3.1	0.003	0.53	0.0	0.04	20.47	0.00	2.441	5.26	1.95	3.5	96.5	0.0	0.06	0.21	0.65	0.82	3.25	11441	1308	7	44	1	0	0	logfile
✔	9AXF	43966	2024-08-08	2024-03-06	3.5	2.15	—	2.9	0.005	0.78	0.0	0.06	13.15	0.00	2.162	5.78	0.00	2.4	97.6	0.0	0.13	0.80	0.80	4.05	2.9	0.004	0.57	0.0	0.04	14.16	0.00	2.272	3.94	1.56	3.1	96.9	0.0	0.85	0.33	0.81	0.80	3.67	21342	2607	15	0	40	0	0	logfile

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