Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8RNU	19395	2024-10-11	2024-01-11	3.4	5.41	2.49	3.9	0.010	1.04	0.0	0.05	17.19	0.01	2.104	28.22	0.32	10.1	89.9	0.0	-2.17	0.62	0.30	0.31	3.9	0.004	0.78	0.0	0.05	17.94	0.01	2.398	25.78	3.69	10.5	89.5	0.0	-2.30	0.67	0.63	0.33	0.49	10848	1320	12	0	0	0	0	logfile
✔	8RNU	19395	2025-01-17	2024-01-11	3.4	5.41	2.49	3.9	0.010	1.04	0.0	0.05	17.19	0.01	2.104	28.22	0.32	10.1	89.9	0.0	-2.17	0.62	0.30	0.31	3.9	0.004	0.77	0.0	0.05	17.91	0.01	2.426	24.31	3.45	10.2	89.8	0.0	-2.07	0.65	0.65	0.39	0.44	10848	1320	12	0	0	0	0	logfile
✔	8RNU	19395	2024-08-04	2024-01-11	3.4	5.41	2.49	3.9	0.010	1.04	0.0	0.05	17.19	0.01	2.104	28.22	0.32	10.1	89.9	0.0	-2.17	0.62	0.30	0.31	3.9	0.004	0.78	0.0	0.05	17.94	0.01	2.398	25.78	3.69	10.5	89.5	0.0	-2.30	0.67	0.63	0.33	0.49	10848	1320	12	0	0	0	0	logfile
✔	8RNU	19395	2024-07-20	2024-01-11	3.4	5.41	2.49	3.9	0.010	1.04	0.0	0.05	17.19	0.01	2.104	28.22	0.32	10.1	89.9	0.0	-2.17	0.62	0.30	0.31	3.9	0.004	0.77	0.0	0.05	18.14	0.01	2.136	29.79	4.17	10.8	89.2	0.0	-2.45	0.71	0.64	0.32	0.56	10848	1320	12	0	0	0	0	logfile
✔	8RNU	19395	2025-02-14	2024-01-11	3.4	5.41	2.49	3.9	0.010	1.04	0.0	0.05	17.19	0.01	2.104	28.22	0.32	10.1	89.9	0.0	-2.17	0.62	0.30	0.31	3.9	0.004	0.77	0.0	0.05	17.91	0.01	2.426	24.31	3.45	10.2	89.8	0.0	-2.07	0.65	0.65	0.39	0.44	10848	1320	12	0	0	0	0	logfile
✔	8RNU	19395	2024-09-25	2024-01-11	3.4	5.41	2.49	3.9	0.010	1.04	0.0	0.05	17.19	0.01	2.104	28.22	0.32	10.1	89.9	0.0	-2.17	0.62	0.30	0.31	3.9	0.004	0.78	0.0	0.05	17.94	0.01	2.398	25.78	3.69	10.5	89.5	0.0	-2.30	0.67	0.63	0.33	0.49	10848	1320	12	0	0	0	0	logfile
✔	8XT9	38641	2025-03-11	2024-01-10	3.1	3.69	2.94	3.5	0.007	1.30	5.0	0.08	17.17	0.01	2.268	4.41	6.04	6.0	93.4	0.6	-0.55	0.68	0.80	2.69	3.5	0.003	0.66	0.0	0.04	16.94	0.00	2.542	6.66	4.21	4.8	95.2	0.0	0.31	1.16	0.70	0.83	2.56	6479	842	2	0	0	0	0	logfile
✔	8XT9	38641	2025-02-11	2024-01-10	3.1	3.69	2.95	3.5	0.007	1.30	5.0	0.08	17.17	0.01	2.268	4.41	6.04	6.0	93.4	0.6	-0.55	0.68	0.80	2.69	3.5	0.003	0.66	0.0	0.04	16.96	0.00	2.510	6.81	4.63	4.1	95.9	0.0	0.35	1.16	0.70	0.83	2.47	6479	842	2	0	0	0	0	logfile
✔	8XT9	38641	2025-04-27	2024-01-10	3.1	3.69	2.94	3.5	0.010	1.32	5.0	0.08	17.17	0.01	2.268	4.41	6.04	6.0	93.4	0.6	-0.55	0.68	0.80	2.69	3.5	0.003	0.66	0.0	0.04	16.94	0.00	2.542	6.66	4.21	4.8	95.2	0.0	0.31	1.16	0.70	0.83	2.56	6479	842	2	0	0	0	0	logfile
✘	8XSM	38622	2025-02-10	2024-01-09	3.01	3.31	3.04	3.3	0.008	0.93	0.0	0.05	13.81	0.01	2.161	5.27	1.40	3.8	96.2	0.0	-1.76	0.54	0.81	2.53	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	2788	375	2	0	2	0	0	logfile
✔	8RN7	19389	2025-01-26	2024-01-09	3.09	3.41	3.22	3.4	0.002	0.48	0.0	0.04	16.66	0.00	2.064	6.96	0.00	3.6	96.3	0.1	1.01	0.62	0.79	2.78	3.4	0.003	0.52	0.0	0.04	17.12	0.00	2.145	5.07	2.41	4.1	95.8	0.1	0.58	2.56	0.61	0.80	2.92	24289	1524	6	0	1	0	12184	logfile
✔	8XSM	38622	2025-03-05	2024-01-09	3.01	3.31	3.04	3.3	0.008	0.93	0.0	0.05	13.81	0.01	2.161	5.27	1.40	3.8	96.2	0.0	-1.76	0.54	0.81	2.53	3.3	0.003	0.57	0.0	0.04	14.52	0.00	2.653	3.16	2.10	1.9	98.1	0.0	2.40	0.90	0.55	0.82	2.10	2788	375	2	0	2	0	0	logfile
✔	8XSM	38622	2025-04-26	2024-01-09	3.01	3.31	3.04	3.3	0.008	0.93	0.0	0.05	13.81	0.01	2.161	5.27	1.40	3.8	96.2	0.0	-1.76	0.54	0.81	2.53	3.3	0.003	0.57	0.0	0.04	14.52	0.00	2.653	3.16	2.10	1.9	98.1	0.0	2.40	0.90	0.55	0.82	2.10	2788	375	2	0	2	0	0	logfile
✔	8RN6	19388	2025-01-25	2024-01-09	2.82	3.09	2.90	3.1	0.003	0.57	0.0	0.04	17.61	0.00	2.145	5.82	2.21	4.4	95.6	0.1	0.28	0.65	0.86	3.72	3.1	0.003	0.57	0.0	0.04	17.57	0.00	2.188	4.12	2.53	4.4	95.5	0.1	0.29	0.33	0.62	0.86	3.87	23047	1455	3	0	0	0	11505	logfile
✔	8RN6	19388	2024-09-29	2024-01-09	2.82	3.09	2.90	3.1	0.003	0.57	0.0	0.04	17.61	0.00	2.145	5.82	2.21	4.4	95.6	0.1	0.28	0.65	0.86	3.72	3.1	0.003	0.57	0.0	0.04	17.56	0.00	2.173	4.21	2.77	4.5	95.4	0.1	0.28	0.33	0.62	0.85	3.88	23047	1455	3	0	0	0	11505	logfile
✔	8RN7	19389	2024-09-30	2024-01-09	3.09	3.41	3.22	3.4	0.002	0.48	0.0	0.04	16.66	0.00	2.064	6.96	0.00	3.6	96.3	0.1	1.01	0.62	0.79	2.78	3.4	0.003	0.51	0.0	0.04	17.16	0.00	2.165	4.78	2.03	4.1	95.8	0.1	0.59	2.57	0.61	0.80	2.74	24289	1524	6	0	1	0	12184	logfile
✔	8XSi	38619	2025-04-27	2024-01-09	2.1	2.13	2.10	1.9	0.003	0.61	0.0	0.05	12.12	0.00	2.136	4.88	0.55	6.4	93.4	0.2	-0.70	0.80	0.79	4.65	1.9	0.004	0.69	0.0	0.05	13.90	0.00	2.534	4.27	1.92	6.4	93.4	0.2	-0.89	0.90	0.84	0.82	4.58	3354	429	4	0	1	0	0	logfile
✔	8XSi	38619	2025-01-14	2024-01-09	2.1	2.13	2.10	1.9	0.003	0.60	0.0	0.05	12.12	0.00	2.136	4.88	0.55	6.4	93.4	0.2	-0.70	0.80	0.79	4.65	1.9	0.003	0.62	0.0	0.05	13.83	0.00	2.541	3.66	1.92	5.9	93.9	0.2	-0.76	0.89	0.83	0.82	4.65	3354	429	4	0	1	0	0	logfile
✔	8XSi	38619	2025-02-11	2024-01-09	2.1	2.13	2.10	1.9	0.003	0.60	0.0	0.05	12.12	0.00	2.136	4.88	0.55	6.4	93.4	0.2	-0.70	0.80	0.79	4.65	1.9	0.003	0.62	0.0	0.05	13.83	0.00	2.541	3.66	1.92	5.9	93.9	0.2	-0.76	0.89	0.83	0.82	4.65	3354	429	4	0	1	0	0	logfile
✔	8XSi	38619	2025-03-06	2024-01-09	2.1	2.13	2.10	1.9	0.003	0.60	0.0	0.05	12.12	0.00	2.136	4.88	0.55	6.4	93.4	0.2	-0.70	0.80	0.79	4.65	1.9	0.004	0.67	0.0	0.05	14.20	0.00	2.536	4.27	1.37	5.9	93.9	0.2	-0.93	0.90	0.84	0.82	4.65	3354	429	4	0	1	0	0	logfile

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