Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8XH6	38342	2025-01-13	2023-12-17	3.52	3.74	3.34	3.8	0.003	0.59	0.0	0.04	14.08	0.00	2.397	7.22	0.00	2.8	97.2	0.0	1.24	0.52	0.75	0.63	3.7	0.003	0.62	0.0	0.03	16.78	0.00	2.467	7.76	2.17	3.5	96.5	0.0	2.74	0.40	0.53	0.77	1.10	2634	322	2	0	0	0	0	logfile
✔	8XH6	38342	2024-11-14	2023-12-17	3.52	3.74	3.34	3.8	0.003	0.59	0.0	0.04	14.08	0.00	2.397	7.22	0.00	2.8	97.2	0.0	1.24	0.52	0.75	0.63	3.8	0.003	0.60	0.0	0.03	16.75	0.00	2.484	7.58	1.45	2.8	97.2	0.0	2.91	0.40	0.53	0.76	1.10	2634	322	2	0	0	0	0	logfile
✔	8VDP	43154	2024-11-17	2023-12-17	3.4	3.67	3.49	3.6	0.005	0.74	0.0	0.04	15.35	0.00	2.097	11.85	0.71	2.6	97.4	0.0	2.39	0.76	0.81	1.44	3.6	0.003	0.59	0.0	0.04	16.95	0.00	2.478	9.21	1.49	1.9	98.1	0.0	3.78	1.21	0.76	0.81	1.14	14732	2005	1	0	0	0	0	logfile
✔	8VDP	43154	2024-10-13	2023-12-17	3.4	3.67	3.49	3.6	0.005	0.74	0.0	0.04	15.35	0.00	2.097	11.85	0.71	2.6	97.4	0.0	2.39	0.76	0.81	1.44	3.6	0.003	0.59	0.0	0.04	16.95	0.00	2.478	9.21	1.49	1.9	98.1	0.0	3.78	1.21	0.76	0.81	1.14	14732	2005	1	0	0	0	0	logfile
✔	8XHF	38349	2024-12-30	2023-12-17	2.39	2.22	2.45	1.9	0.004	0.53	0.0	0.04	19.11	0.00	2.199	4.47	4.42	3.7	96.2	0.1	-0.03	0.85	0.86	3.88	1.9	0.003	0.56	0.0	0.04	18.46	0.00	2.438	3.99	2.33	3.1	96.9	0.0	0.45	0.89	0.85	0.85	3.59	11736	1464	6	0	9	0	0	logfile
✔	8VDP	43154	2025-01-20	2023-12-17	3.4	3.67	3.49	3.6	0.005	0.74	0.0	0.04	15.35	0.00	2.097	11.85	0.71	2.6	97.4	0.0	2.39	0.76	0.81	1.44	3.6	0.003	0.59	0.0	0.04	16.93	0.00	2.502	9.01	1.75	1.8	98.2	0.0	3.81	1.21	0.76	0.81	1.20	14732	2005	1	0	0	0	0	logfile
✔	8XHF	38349	2025-01-18	2023-12-17	2.39	2.22	2.45	1.9	0.004	0.53	0.0	0.04	19.11	0.00	2.199	4.47	4.42	3.7	96.2	0.1	-0.03	0.85	0.86	3.88	1.9	0.003	0.55	0.0	0.04	18.44	0.00	2.521	3.82	3.33	3.2	96.8	0.0	0.45	0.89	0.85	0.85	3.70	11736	1464	6	0	9	0	0	logfile
✔	8VDR	43156	2024-11-17	2023-12-17	3.7	4.10	3.88	4.1	0.006	0.82	0.0	0.04	15.25	0.00	2.179	14.82	1.34	2.8	97.2	0.0	-0.40	0.81	0.83	1.05	4.1	0.003	0.69	0.0	0.04	16.54	0.00	2.459	9.56	1.62	2.0	98.0	0.0	2.49	0.54	0.81	0.81	0.99	13547	1852	1	0	0	0	0	logfile
✔	8VDR	43156	2025-01-19	2023-12-17	3.7	4.10	3.88	4.1	0.006	0.82	0.0	0.04	15.25	0.00	2.179	14.82	1.34	2.8	97.2	0.0	-0.40	0.81	0.83	1.05	4.1	0.003	0.69	0.0	0.04	16.52	0.00	2.429	9.78	1.27	2.0	98.0	0.0	2.41	0.54	0.81	0.81	0.99	13547	1852	1	0	0	0	0	logfile
✔	8VDR	43156	2024-12-30	2023-12-17	3.7	4.10	3.88	4.1	0.006	0.82	0.0	0.04	15.25	0.00	2.179	14.82	1.34	2.8	97.2	0.0	-0.40	0.81	0.83	1.05	4.1	0.003	0.69	0.0	0.04	16.54	0.00	2.459	9.56	1.62	2.0	98.0	0.0	2.49	0.54	0.81	0.81	0.99	13547	1852	1	0	0	0	0	logfile
✔	8VDR	43156	2024-10-13	2023-12-17	3.7	4.10	3.88	4.1	0.006	0.82	0.0	0.04	15.25	0.00	2.179	14.82	1.34	2.8	97.2	0.0	-0.40	0.81	0.83	1.05	4.1	0.003	0.69	0.0	0.04	16.54	0.00	2.459	9.56	1.62	2.0	98.0	0.0	2.49	0.54	0.81	0.81	0.99	13547	1852	1	0	0	0	0	logfile
✔	8XH7	38343	2024-12-28	2023-12-17	3.52	3.84	3.46	3.9	0.005	0.91	0.0	0.06	14.93	0.00	2.376	7.40	2.17	4.5	95.5	0.0	2.45	0.57	0.77	1.35	3.9	0.003	0.64	0.0	0.03	17.02	0.00	2.505	8.66	3.02	4.6	95.4	0.0	3.54	0.72	0.55	0.78	1.40	7902	966	6	0	0	0	0	logfile
✔	8XH7	38343	2024-08-03	2023-12-17	3.52	3.84	3.46	3.9	0.005	0.91	0.0	0.06	14.93	0.00	2.376	7.40	2.17	4.5	95.5	0.0	2.45	0.57	0.77	1.35	3.9	0.003	0.64	0.0	0.03	17.02	0.00	2.505	8.66	3.02	4.6	95.4	0.0	3.54	0.72	0.55	0.78	1.40	7902	966	6	0	0	0	0	logfile
✔	8XH7	38343	2025-03-12	2023-12-17	3.52	3.84	3.42	3.9	0.005	0.91	0.0	0.06	14.93	0.00	2.376	7.40	2.17	4.5	95.5	0.0	2.45	0.57	0.77	1.35	3.9	0.003	0.62	0.0	0.03	17.04	0.00	2.509	8.72	3.50	4.6	95.4	0.0	3.61	0.50	0.55	0.78	1.48	7902	966	6	0	0	0	0	logfile
✔	8XH7	38343	2024-10-10	2023-12-17	3.52	3.84	3.46	3.9	0.005	0.91	0.0	0.06	14.93	0.00	2.376	7.40	2.17	4.5	95.5	0.0	2.45	0.57	0.77	1.35	3.9	0.003	0.64	0.0	0.03	17.02	0.00	2.505	8.66	3.02	4.6	95.4	0.0	3.54	0.72	0.55	0.78	1.40	7902	966	6	0	0	0	0	logfile
✘	8XH7	38343	2025-02-12	2023-12-17	3.52	3.84	3.46	3.9	0.005	0.91	0.0	0.06	14.93	0.00	2.376	7.40	2.17	4.5	95.5	0.0	2.45	0.57	0.77	1.35	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7902	966	6	0	0	0	0	logfile
✔	8XH7	38343	2024-11-15	2023-12-17	3.52	3.84	3.46	3.9	0.005	0.91	0.0	0.06	14.93	0.00	2.376	7.40	2.17	4.5	95.5	0.0	2.45	0.57	0.77	1.35	3.9	0.003	0.64	0.0	0.03	17.02	0.00	2.505	8.66	3.02	4.6	95.4	0.0	3.54	0.72	0.55	0.78	1.40	7902	966	6	0	0	0	0	logfile
✔	8XH7	38343	2024-09-24	2023-12-17	3.52	3.84	3.46	3.9	0.005	0.91	0.0	0.06	14.93	0.00	2.376	7.40	2.17	4.5	95.5	0.0	2.45	0.57	0.77	1.35	3.9	0.003	0.64	0.0	0.03	17.02	0.00	2.505	8.66	3.02	4.6	95.4	0.0	3.54	0.72	0.55	0.78	1.40	7902	966	6	0	0	0	0	logfile
✘	8XH7	38343	2025-01-15	2023-12-17	3.52	3.84	3.46	3.9	0.005	0.91	0.0	0.06	14.93	0.00	2.376	7.40	2.17	4.5	95.5	0.0	2.45	0.57	0.77	1.35	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7902	966	6	0	0	0	0	logfile
✔	8VDo	43152	2024-10-12	2023-12-16	2.7	2.95	2.74	3.0	0.005	0.72	0.0	0.04	15.24	0.00	2.198	9.48	0.45	0.9	99.1	0.0	1.94	0.61	0.73	2.94	3.0	0.003	0.57	0.0	0.04	16.89	0.00	2.520	7.64	2.18	1.0	99.0	0.0	3.81	0.29	0.59	0.73	2.65	12691	1740	1	0	0	0	0	logfile

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