Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8YXZ	39661	2024-12-30	2024-04-03	3.0	3.42	3.20	3.4	0.011	1.66	2.0	0.09	12.99	0.01	2.396	0.58	0.08	2.5	97.5	0.1	-0.44	0.73	0.85	2.48	3.3	0.003	0.62	0.0	0.04	15.08	0.00	2.592	6.20	0.78	2.4	97.6	0.0	2.59	1.87	0.75	0.88	1.26	13478	1845	14	0	0	0	0	logfile
✔	8YXZ	39661	2025-06-11	2024-04-03	3.0	3.42	3.20	3.4	0.011	1.66	2.0	0.09	12.99	0.01	2.396	0.58	0.08	2.5	97.5	0.1	-0.44	0.73	0.85	2.48	3.3	0.003	0.60	0.0	0.04	15.19	0.00	2.590	5.61	1.33	2.6	97.4	0.0	2.59	0.60	0.75	0.88	1.20	13478	1845	14	0	0	0	0	logfile
✔	8YXZ	39661	2025-05-15	2024-04-03	3.0	3.42	3.20	3.4	0.011	1.66	2.0	0.09	12.99	0.01	2.396	0.58	0.08	2.5	97.5	0.1	-0.44	0.73	0.85	2.48	3.3	0.004	0.65	0.0	0.04	15.16	0.00	2.497	5.72	1.57	2.6	97.4	0.0	2.36	0.59	0.75	0.88	1.27	13478	1845	14	0	0	0	0	logfile
✔	9BAA	44402	2025-01-15	2024-04-03	3.39	3.77	3.55	3.7	0.004	0.63	0.0	0.04	14.98	0.00	2.231	9.22	0.12	8.1	91.7	0.2	1.06	0.63	0.81	1.62	3.7	0.004	0.96	1.0	0.04	16.68	0.00	2.256	10.28	2.47	8.3	91.4	0.3	1.76	0.34	0.61	0.81	1.23	7771	994	2	0	0	0	0	logfile
✔	9BAA	44402	2025-02-12	2024-04-03	3.39	3.77	3.55	3.7	0.004	0.63	0.0	0.04	14.98	0.00	2.231	9.22	0.12	8.1	91.7	0.2	1.06	0.63	0.81	1.62	3.7	0.004	0.96	1.0	0.04	16.68	0.00	2.256	10.28	2.47	8.3	91.4	0.3	1.76	0.34	0.61	0.81	1.23	7771	994	2	0	0	0	0	logfile
✔	9BAA	44402	2025-03-12	2024-04-03	3.39	3.77	3.54	3.7	0.004	0.63	0.0	0.04	14.98	0.00	2.231	9.22	0.12	8.1	91.7	0.2	1.06	0.63	0.81	1.62	3.7	0.003	0.61	0.0	0.04	16.59	0.00	2.437	8.78	2.36	7.8	92.0	0.2	1.80	0.34	0.61	0.81	1.29	7771	994	2	0	0	0	0	logfile
✔	9BAA	44402	2025-05-11	2024-04-03	3.39	3.77	3.54	3.7	0.004	0.63	0.0	0.04	14.98	0.00	2.231	9.22	0.12	8.1	91.7	0.2	1.06	0.63	0.81	1.62	3.7	0.004	0.96	1.0	0.04	16.68	0.00	2.256	10.28	2.47	8.3	91.4	0.3	1.76	0.34	0.61	0.81	1.23	7771	994	2	0	0	0	0	logfile
✔	9BAA	44402	2025-06-06	2024-04-03	3.39	3.77	3.54	3.7	0.004	0.63	0.0	0.04	14.98	0.00	2.231	9.22	0.12	8.1	91.7	0.2	1.06	0.63	0.81	1.62	3.7	0.003	0.61	0.0	0.04	16.59	0.00	2.437	8.78	2.36	7.8	92.0	0.2	1.80	0.34	0.61	0.81	1.29	7771	994	2	0	0	0	0	logfile
✔	9BAA	44402	2024-11-14	2024-04-03	3.39	3.77	3.55	3.7	0.004	0.63	0.0	0.04	14.98	0.00	2.231	9.22	0.12	8.1	91.7	0.2	1.06	0.63	0.81	1.62	3.7	0.003	0.63	0.0	0.04	16.69	0.00	2.339	8.28	2.71	8.1	91.7	0.2	1.65	0.33	0.61	0.81	1.15	7771	994	2	0	0	0	0	logfile
✔	9BAA	44402	2024-12-28	2024-04-03	3.39	3.77	3.55	3.7	0.004	0.63	0.0	0.04	14.98	0.00	2.231	9.22	0.12	8.1	91.7	0.2	1.06	0.63	0.81	1.62	3.7	0.003	0.63	0.0	0.04	16.69	0.00	2.339	8.28	2.71	8.1	91.7	0.2	1.65	0.33	0.61	0.81	1.15	7771	994	2	0	0	0	0	logfile
✔	8YX8	39650	2025-05-15	2024-04-02	2.8	3.36	2.85	3.2	0.007	0.58	0.0	0.04	12.02	0.00	2.281	8.00	0.00	0.0	100.0	0.0	2.24	0.62	0.82	3.60	3.2	0.005	0.84	1.0	0.05	15.32	0.00	2.381	9.71	2.17	1.5	98.5	0.0	1.68	1.06	0.64	0.85	3.69	13070	1620	15	0	15	0	0	logfile
✔	8YX8	39650	2025-06-11	2024-04-02	2.8	3.36	2.85	3.2	0.007	0.58	0.0	0.04	12.02	0.00	2.281	8.00	0.00	0.0	100.0	0.0	2.24	0.62	0.82	3.60	3.2	0.004	0.81	1.0	0.04	15.36	0.00	2.384	9.18	1.75	1.1	98.9	0.0	1.75	1.06	0.63	0.84	3.80	13070	1620	15	0	15	0	0	logfile
✔	8YX8	39650	2025-01-19	2024-04-02	2.8	3.36	2.85	3.2	0.007	0.58	0.0	0.04	12.02	0.00	2.281	8.00	0.00	0.0	100.0	0.0	2.24	0.62	0.82	3.60	3.2	0.006	0.63	0.0	0.04	15.22	0.00	2.584	10.20	2.38	1.5	98.5	0.0	1.49	1.07	0.64	0.86	3.72	13070	1620	15	0	15	0	0	logfile
✔	9EVZ	50020	2025-06-15	2024-04-02	2.92	2.21	3.01	2.0	0.003	0.65	0.0	0.05	14.38	0.00	2.197	4.63	1.52	2.7	97.3	0.0	0.10	0.80	0.79	2.80	2.0	0.004	0.68	0.0	0.05	15.45	0.00	2.550	3.88	2.93	3.1	96.9	0.0	0.39	1.44	0.79	0.81	2.83	17512	2113	32	0	75	0	0	logfile
✔	9EVZ	50020	2025-05-18	2024-04-02	2.92	2.21	3.01	2.0	0.003	0.65	0.0	0.05	14.38	0.00	2.197	4.63	1.52	2.7	97.3	0.0	0.10	0.80	0.79	2.80	2.0	0.003	0.63	0.0	0.04	15.42	0.00	2.570	3.56	2.76	2.7	97.3	0.0	0.49	1.44	0.79	0.80	2.86	17512	2113	32	0	75	0	0	logfile
✔	8YX7	39649	2025-05-15	2024-04-02	2.8	3.51	2.95	3.3	0.007	0.58	0.0	0.04	10.87	0.00	2.227	7.55	0.00	0.9	99.1	0.0	2.69	0.62	0.82	3.35	3.3	0.003	0.58	0.0	0.04	14.48	0.00	2.612	7.63	2.10	1.9	98.1	0.0	2.02	0.57	0.56	0.79	3.68	13070	1620	15	0	15	0	0	logfile
✔	9B9J	44386	2025-06-15	2024-04-02	2.6	3.11	2.64	3.0	0.005	0.74	0.0	0.05	19.52	0.00	2.049	2.70	0.34	2.9	97.0	0.1	0.15	0.70	0.77	4.32	3.0	0.003	0.58	0.0	0.04	14.69	0.00	2.038	2.28	1.01	2.8	97.1	0.1	0.24	0.61	0.73	0.81	3.89	16334	1055	16	0	39	0	7817	logfile
✔	8YX7	39649	2025-01-19	2024-04-02	2.8	3.51	2.95	3.3	0.007	0.58	0.0	0.04	10.87	0.00	2.030	7.55	0.00	0.9	99.1	0.0	2.69	0.62	0.82	3.35	3.3	0.003	0.59	0.0	0.04	14.51	0.00	2.512	7.77	1.19	1.9	98.1	0.0	2.02	0.58	0.56	0.79	3.69	13070	1620	15	0	15	0	0	logfile
✔	9B9J	44386	2025-05-18	2024-04-02	2.6	3.11	2.64	3.0	0.005	0.74	0.0	0.05	19.52	0.00	2.049	2.70	0.34	2.9	97.0	0.1	0.15	0.70	0.77	4.32	3.0	0.003	0.58	0.0	0.04	14.65	0.00	2.037	2.40	0.90	2.6	97.3	0.1	0.26	0.61	0.73	0.81	3.90	16334	1055	16	0	39	0	7817	logfile
✔	8YX7	39649	2025-06-11	2024-04-02	2.8	3.51	2.95	3.3	0.007	0.58	0.0	0.04	10.87	0.00	2.227	7.55	0.00	0.9	99.1	0.0	2.69	0.62	0.82	3.35	3.3	0.003	0.58	0.0	0.04	14.59	0.00	2.600	7.51	1.68	1.9	98.1	0.0	1.99	0.58	0.60	0.82	3.61	13070	1620	15	0	15	0	0	logfile

• ← previous
• Page 311 of 5208
• next →