Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8VDo	43152	2024-10-12	2023-12-16	2.7	2.95	2.74	3.0	0.005	0.72	0.0	0.04	15.24	0.00	2.198	9.48	0.45	0.9	99.1	0.0	1.94	0.61	0.73	2.94	3.0	0.003	0.57	0.0	0.04	16.89	0.00	2.520	7.64	2.18	1.0	99.0	0.0	3.81	0.29	0.59	0.73	2.65	12691	1740	1	0	0	0	0	logfile
✔	8VDo	43152	2025-01-18	2023-12-16	2.7	2.95	2.74	3.0	0.005	0.72	0.0	0.04	15.24	0.00	2.198	9.48	0.45	0.9	99.1	0.0	1.94	0.61	0.73	2.94	3.0	0.003	0.57	0.0	0.04	16.90	0.00	2.518	7.52	1.73	0.9	99.1	0.0	4.02	0.30	0.59	0.73	2.60	12691	1740	1	0	0	0	0	logfile
✔	8VDo	43152	2024-12-30	2023-12-16	2.7	2.95	2.74	3.0	0.005	0.72	0.0	0.04	15.24	0.00	2.198	9.48	0.45	0.9	99.1	0.0	1.94	0.61	0.73	2.94	3.0	0.003	0.57	0.0	0.04	16.89	0.00	2.520	7.64	2.18	1.0	99.0	0.0	3.81	0.29	0.59	0.73	2.65	12691	1740	1	0	0	0	0	logfile
✔	8RHB	19174	2025-03-14	2023-12-15	3.0	3.79	2.98	5.0	0.005	0.67	0.0	0.05	17.12	0.00	1.818	7.61	0.00	3.0	97.0	0.0	0.48	0.44	0.30	0.58	3.6	0.005	0.95	0.0	0.05	17.65	0.01	1.912	16.17	2.03	3.1	96.9	0.0	-0.63	1.80	0.68	0.81	1.68	9539	1196	9	1	5	0	0	logfile
✔	8RHB	19174	2025-02-13	2023-12-15	3.0	3.79	2.99	5.0	0.005	0.67	0.0	0.05	17.12	0.00	1.818	7.61	0.00	3.0	97.0	0.0	0.48	0.44	0.30	0.58	3.6	0.007	1.15	1.0	0.06	17.21	0.00	1.867	22.67	2.42	3.0	97.0	0.0	-0.33	1.61	0.66	0.78	0.91	9539	1196	9	1	5	0	0	logfile
✔	8RHB	19174	2025-01-16	2023-12-15	3.0	3.79	2.99	5.0	0.005	0.67	0.0	0.05	17.12	0.00	1.818	7.61	0.00	3.0	97.0	0.0	0.48	0.44	0.30	0.58	3.6	0.007	1.15	1.0	0.06	17.21	0.00	1.867	22.67	2.42	3.0	97.0	0.0	-0.33	1.61	0.66	0.78	0.91	9539	1196	9	1	5	0	0	logfile
✔	8RHH	19176	2024-12-30	2023-12-15	3.0	3.80	2.99	3.5	0.005	0.70	0.0	0.04	16.97	0.00	1.931	8.14	0.15	3.1	96.9	0.0	0.16	0.65	0.82	2.49	3.5	0.007	0.81	0.0	0.05	16.51	0.00	1.857	12.15	2.09	3.9	96.0	0.1	0.14	0.83	0.63	0.86	2.49	12261	1533	11	1	7	0	0	logfile
✔	8RHH	19176	2025-01-18	2023-12-15	3.0	3.80	2.99	3.5	0.005	0.70	0.0	0.04	16.97	0.00	1.931	8.14	0.15	3.1	96.9	0.0	0.16	0.65	0.82	2.49	3.5	0.003	0.70	0.0	0.04	16.43	0.00	2.031	8.56	2.17	3.1	96.9	0.0	0.67	0.82	0.62	0.85	2.41	12261	1533	11	1	7	0	0	logfile
✔	8VDF	43148	2024-12-27	2023-12-15	3.5	3.66	3.34	3.7	0.004	0.86	0.0	0.05	12.53	0.01	2.224	4.73	0.00	3.5	96.5	0.0	-1.98	0.58	0.63	2.46	3.8	0.004	0.66	0.0	0.04	14.67	0.00	2.509	9.46	2.46	5.1	94.9	0.0	-0.56	0.87	0.61	0.67	2.32	2584	326	3	0	0	0	0	logfile
✔	8VDF	43148	2024-11-14	2023-12-15	3.5	3.66	3.34	3.7	0.004	0.86	0.0	0.05	12.53	0.01	2.224	4.73	0.00	3.5	96.5	0.0	-1.98	0.58	0.63	2.46	3.8	0.004	0.66	0.0	0.04	14.67	0.00	2.509	9.46	2.46	5.1	94.9	0.0	-0.56	0.87	0.61	0.67	2.32	2584	326	3	0	0	0	0	logfile
✔	8VDF	43148	2024-10-09	2023-12-15	3.5	3.66	3.34	3.7	0.004	0.86	0.0	0.05	12.53	0.01	2.224	4.73	0.00	3.5	96.5	0.0	-1.98	0.58	0.63	2.46	3.8	0.004	0.66	0.0	0.04	14.67	0.00	2.509	9.46	2.46	5.1	94.9	0.0	-0.56	0.87	0.61	0.67	2.32	2584	326	3	0	0	0	0	logfile
✔	8VDF	43148	2025-03-05	2023-12-15	3.5	3.66	3.36	3.7	0.004	0.86	0.0	0.05	12.53	0.01	2.224	4.73	0.00	3.5	96.5	0.0	-1.98	0.58	0.63	2.46	3.8	0.004	0.66	0.0	0.04	14.70	0.00	2.507	9.46	3.17	5.7	94.3	0.0	-0.53	0.88	0.61	0.68	2.26	2584	326	3	0	0	0	0	logfile
✔	8VDF	43148	2025-02-10	2023-12-15	3.5	3.66	3.34	3.7	0.004	0.86	0.0	0.05	12.53	0.01	2.224	4.73	0.00	3.5	96.5	0.0	-1.98	0.58	0.63	2.46	3.8	0.004	0.65	0.0	0.04	14.75	0.00	2.515	8.47	3.87	5.7	94.3	0.0	-0.61	0.87	0.61	0.68	2.23	2584	326	3	0	0	0	0	logfile
✔	8VDF	43148	2025-01-13	2023-12-15	3.5	3.66	3.34	3.7	0.004	0.86	0.0	0.05	12.53	0.01	2.224	4.73	0.00	3.5	96.5	0.0	-1.98	0.58	0.63	2.46	3.8	0.004	0.65	0.0	0.04	14.75	0.00	2.515	8.47	3.87	5.7	94.3	0.0	-0.61	0.87	0.61	0.68	2.23	2584	326	3	0	0	0	0	logfile
✔	8RHB	19174	2024-12-29	2023-12-15	3.0	3.79	2.99	5.0	0.005	0.67	0.0	0.05	17.12	0.00	1.818	7.61	0.00	3.0	97.0	0.0	0.48	0.44	0.30	0.58	3.6	0.004	0.96	0.0	0.05	17.67	0.01	1.974	14.79	2.03	3.3	96.7	0.0	-0.24	1.62	0.67	0.79	1.30	9539	1196	9	1	5	0	0	logfile
✔	8RH9	19173	2024-12-30	2023-12-15	3.21	3.47	3.25	3.5	0.003	0.64	0.0	0.04	9.29	0.00	2.083	4.71	0.06	2.7	97.3	0.0	1.60	0.65	0.84	3.69	3.5	0.002	0.51	0.0	0.04	13.66	0.00	2.542	3.03	2.07	2.7	97.3	0.0	1.81	0.87	0.68	0.87	2.74	14247	1665	15	0	51	17	0	logfile
✔	8VDG	43149	2024-10-09	2023-12-15	3.35	3.57	3.30	3.6	0.006	0.82	0.0	0.05	13.86	0.01	2.274	7.04	0.35	6.5	93.5	0.0	-1.56	0.55	0.79	3.81	3.6	0.033	1.02	0.0	0.04	15.34	0.01	2.544	5.67	1.76	4.2	95.8	0.0	0.87	1.67	0.58	0.83	3.80	2583	323	3	0	0	0	0	logfile
✔	8RHN	19177	2024-07-27	2023-12-15	4.5	4.44	4.58	4.1	0.006	0.80	2.0	0.05	14.00	0.01	1.290	11.68	0.00	12.9	87.0	0.1	-4.53	0.80	0.73	—	4.1	0.003	0.70	0.0	0.04	14.12	0.00	2.034	4.85	0.00	7.4	92.6	0.0	-0.39	1.25	0.80	0.72	—	38368	4976	16	0	0	0	0	logfile
✘	8RHG	19175	2025-01-19	2023-12-15	3.01	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13897	1650	10	0	26	0	0	logfile
✘	8RHG	19175	2024-09-26	2023-12-15	3.01	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13897	1650	10	0	26	0	0	logfile

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