Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8XGR	38330	2024-07-20	2023-12-15	3.2	3.95	3.21	3.7	0.003	0.56	0.0	0.04	13.83	0.00	2.126	7.33	0.22	3.7	96.3	0.0	-2.13	0.69	0.74	2.11	3.8	0.004	0.78	0.0	0.05	16.33	0.00	2.167	16.00	4.12	4.6	95.4	0.0	-0.84	3.07	0.68	0.79	1.00	8206	1049	5	0	0	0	0	logfile
✔	8XGR	38330	2025-02-14	2023-12-15	3.2	3.95	3.21	3.7	0.003	0.56	0.0	0.04	13.83	0.00	2.126	7.33	0.22	3.7	96.3	0.0	-2.13	0.69	0.74	2.11	3.7	0.003	0.77	0.0	0.05	16.52	0.00	2.478	11.66	2.23	2.9	97.1	0.0	-0.69	0.96	0.69	0.79	0.98	8206	1049	5	0	0	0	0	logfile
✔	8XGR	38330	2024-06-26	2023-12-15	3.2	3.95	3.21	3.7	0.003	0.56	0.0	0.04	13.83	0.00	2.126	7.33	0.22	3.7	96.3	0.0	-2.13	0.69	0.74	2.11	3.8	0.004	0.78	0.0	0.05	16.33	0.00	2.167	16.00	4.12	4.6	95.4	0.0	-0.84	3.07	0.68	0.79	1.00	8206	1049	5	0	0	0	0	logfile
✔	8VDG	43149	2025-01-13	2023-12-15	3.35	3.57	3.30	3.6	0.006	0.82	0.0	0.05	13.86	0.01	2.274	7.04	0.35	6.5	93.5	0.0	-1.56	0.55	0.79	3.81	3.6	0.003	0.58	0.0	0.04	15.62	0.00	2.577	6.06	0.70	3.9	96.1	0.0	0.77	1.68	0.57	0.83	4.00	2583	323	3	0	0	0	0	logfile
✔	8VDG	43149	2025-03-05	2023-12-15	3.35	3.57	3.29	3.6	0.006	0.82	0.0	0.05	13.86	0.01	2.274	7.04	0.35	6.5	93.5	0.0	-1.56	0.55	0.79	3.81	3.6	0.003	0.56	0.0	0.04	15.53	0.00	2.580	5.09	2.11	4.2	95.8	0.0	0.94	1.68	0.57	0.83	3.80	2583	323	3	0	0	0	0	logfile
✔	8VDG	43149	2024-12-27	2023-12-15	3.35	3.57	3.30	3.6	0.006	0.82	0.0	0.05	13.86	0.01	2.274	7.04	0.35	6.5	93.5	0.0	-1.56	0.55	0.79	3.81	3.6	0.033	1.02	0.0	0.04	15.34	0.01	2.544	5.67	1.76	4.2	95.8	0.0	0.87	1.67	0.58	0.83	3.80	2583	323	3	0	0	0	0	logfile
✔	8VDG	43149	2024-11-14	2023-12-15	3.35	3.57	3.30	3.6	0.006	0.82	0.0	0.05	13.86	0.01	2.274	7.04	0.35	6.5	93.5	0.0	-1.56	0.55	0.79	3.81	3.6	0.033	1.02	0.0	0.04	15.34	0.01	2.544	5.67	1.76	4.2	95.8	0.0	0.87	1.67	0.58	0.83	3.80	2583	323	3	0	0	0	0	logfile
✘	8RHG	19175	2024-11-17	2023-12-15	3.01	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13897	1650	10	0	26	0	0	logfile
✘	8RHG	19175	2024-12-30	2023-12-15	3.01	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	13897	1650	10	0	26	0	0	logfile
✔	8VDG	43149	2024-10-09	2023-12-15	3.35	3.57	3.30	3.6	0.006	0.82	0.0	0.05	13.86	0.01	2.274	7.04	0.35	6.5	93.5	0.0	-1.56	0.55	0.79	3.81	3.6	0.033	1.02	0.0	0.04	15.34	0.01	2.544	5.67	1.76	4.2	95.8	0.0	0.87	1.67	0.58	0.83	3.80	2583	323	3	0	0	0	0	logfile
✔	8VDG	43149	2025-02-10	2023-12-15	3.35	3.57	3.30	3.6	0.006	0.82	0.0	0.05	13.86	0.01	2.274	7.04	0.35	6.5	93.5	0.0	-1.56	0.55	0.79	3.81	3.6	0.003	0.58	0.0	0.04	15.62	0.00	2.577	6.06	0.70	3.9	96.1	0.0	0.77	1.68	0.57	0.83	4.00	2583	323	3	0	0	0	0	logfile
✔	8XGM	38328	2024-10-11	2023-12-15	3.29	3.80	3.43	3.7	0.004	0.69	0.0	0.05	17.55	0.00	2.112	10.60	0.36	5.9	94.1	0.0	-0.68	0.58	0.78	2.33	3.7	0.003	0.62	0.0	0.04	17.64	0.00	2.506	7.13	4.48	5.4	94.6	0.0	-0.19	0.38	0.58	0.78	2.26	10319	1302	7	0	1	0	0	logfile
✔	8XGM	38328	2024-11-16	2023-12-15	3.29	3.80	3.43	3.7	0.004	0.69	0.0	0.05	17.55	0.00	2.112	10.60	0.36	5.9	94.1	0.0	-0.68	0.58	0.78	2.33	3.7	0.003	0.62	0.0	0.04	17.64	0.00	2.506	7.13	4.48	5.4	94.6	0.0	-0.19	0.38	0.58	0.78	2.26	10319	1302	7	0	1	0	0	logfile
✔	8XGM	38328	2024-12-29	2023-12-15	3.29	3.80	3.43	3.7	0.004	0.69	0.0	0.05	17.55	0.00	2.112	10.60	0.36	5.9	94.1	0.0	-0.68	0.58	0.78	2.33	3.7	0.003	0.62	0.0	0.04	17.64	0.00	2.506	7.13	4.48	5.4	94.6	0.0	-0.19	0.38	0.58	0.78	2.26	10319	1302	7	0	1	0	0	logfile
✔	8XGM	38328	2024-09-25	2023-12-15	3.29	3.80	3.43	3.7	0.004	0.69	0.0	0.05	17.55	0.00	2.112	10.60	0.36	5.9	94.1	0.0	-0.68	0.58	0.78	2.33	3.7	0.003	0.62	0.0	0.04	17.64	0.00	2.506	7.13	4.48	5.4	94.6	0.0	-0.19	0.38	0.58	0.78	2.26	10319	1302	7	0	1	0	0	logfile
✔	8XGM	38328	2025-02-14	2023-12-15	3.29	3.80	3.43	3.7	0.004	0.69	0.0	0.05	17.55	0.00	2.112	10.60	0.36	5.9	94.1	0.0	-0.68	0.58	0.78	2.33	3.7	0.004	0.64	0.0	0.04	17.61	0.00	2.503	7.47	3.94	6.1	93.9	0.0	-0.10	0.38	0.60	0.80	2.24	10319	1302	7	0	1	0	0	logfile
✔	8XGM	38328	2025-01-17	2023-12-15	3.29	3.80	3.43	3.7	0.004	0.69	0.0	0.05	17.55	0.00	2.112	10.60	0.36	5.9	94.1	0.0	-0.68	0.58	0.78	2.33	3.7	0.004	0.64	0.0	0.04	17.61	0.00	2.503	7.47	3.94	6.1	93.9	0.0	-0.10	0.38	0.60	0.80	2.24	10319	1302	7	0	1	0	0	logfile
✔	8VDF	43148	2025-03-05	2023-12-15	3.5	3.66	3.36	3.7	0.004	0.86	0.0	0.05	12.53	0.01	2.224	4.73	0.00	3.5	96.5	0.0	-1.98	0.58	0.63	2.46	3.8	0.004	0.66	0.0	0.04	14.70	0.00	2.507	9.46	3.17	5.7	94.3	0.0	-0.53	0.88	0.61	0.68	2.26	2584	326	3	0	0	0	0	logfile
✔	8VDF	43148	2025-02-10	2023-12-15	3.5	3.66	3.34	3.7	0.004	0.86	0.0	0.05	12.53	0.01	2.224	4.73	0.00	3.5	96.5	0.0	-1.98	0.58	0.63	2.46	3.8	0.004	0.65	0.0	0.04	14.75	0.00	2.515	8.47	3.87	5.7	94.3	0.0	-0.61	0.87	0.61	0.68	2.23	2584	326	3	0	0	0	0	logfile
✔	8VDF	43148	2025-01-13	2023-12-15	3.5	3.66	3.34	3.7	0.004	0.86	0.0	0.05	12.53	0.01	2.224	4.73	0.00	3.5	96.5	0.0	-1.98	0.58	0.63	2.46	3.8	0.004	0.65	0.0	0.04	14.75	0.00	2.515	8.47	3.87	5.7	94.3	0.0	-0.61	0.87	0.61	0.68	2.23	2584	326	3	0	0	0	0	logfile

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