Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8VDC	43146	2024-12-27	2023-12-14	3.5	3.36	3.50	3.3	0.006	0.75	0.0	0.05	13.43	0.01	2.377	1.34	0.00	2.1	97.9	0.0	-1.87	0.80	0.85	3.14	3.3	0.002	0.50	0.0	0.04	15.18	0.00	2.591	2.87	0.90	1.4	98.6	0.0	1.18	1.47	0.80	0.85	2.68	47064	5736	24	0	0	0	0	logfile
✔	8VDC	43146	2024-10-09	2023-12-14	3.5	3.36	3.50	3.3	0.006	0.75	0.0	0.05	13.43	0.01	2.377	1.34	0.00	2.1	97.9	0.0	-1.87	0.80	0.85	3.14	3.3	0.002	0.50	0.0	0.04	15.18	0.00	2.591	2.87	0.90	1.4	98.6	0.0	1.18	1.47	0.80	0.85	2.68	47064	5736	24	0	0	0	0	logfile
✔	8VDC	43146	2024-02-24	2023-12-14	3.5	3.36	3.50	3.3	0.006	0.75	0.0	0.05	13.43	0.01	2.377	1.34	0.00	2.1	97.9	0.0	-1.87	0.80	0.85	3.14	3.3	0.004	0.54	0.0	0.04	15.11	0.00	2.223	4.26	1.08	2.3	97.7	0.0	0.96	1.47	0.81	0.86	2.68	47064	5736	24	0	0	0	0	logfile
✔	8RH0	19164	2024-09-28	2023-12-14	3.44	3.40	3.32	3.4	0.005	0.62	0.0	0.05	14.04	0.01	2.202	6.74	0.00	1.1	98.9	0.0	0.19	0.79	0.85	3.38	3.4	0.004	0.56	0.0	0.04	15.79	0.00	2.507	4.72	2.24	2.2	97.8	0.0	0.24	1.27	0.78	0.86	3.15	19137	2421	9	0	0	0	0	logfile
✔	8RH0	19164	2024-08-07	2023-12-14	3.44	3.40	3.32	3.4	0.005	0.62	0.0	0.05	14.04	0.01	2.202	6.74	0.00	1.1	98.9	0.0	0.19	0.79	0.85	3.38	3.4	0.004	0.56	0.0	0.04	15.79	0.00	2.507	4.72	2.24	2.2	97.8	0.0	0.24	1.27	0.78	0.86	3.15	19137	2421	9	0	0	0	0	logfile
✔	8RH0	19164	2024-07-22	2023-12-14	3.44	3.40	3.32	3.4	0.005	0.62	0.0	0.05	14.04	0.01	2.202	6.74	0.00	1.1	98.9	0.0	0.19	0.79	0.85	3.38	3.4	0.005	0.58	0.0	0.04	15.80	0.00	2.140	7.09	2.49	2.8	97.2	0.0	0.18	0.41	0.79	0.86	3.27	19137	2421	9	0	0	0	0	logfile
✔	8RH0	19164	2024-06-29	2023-12-14	3.44	3.40	3.32	3.4	0.005	0.62	0.0	0.05	14.04	0.01	2.202	6.74	0.00	1.1	98.9	0.0	0.19	0.79	0.85	3.38	3.4	0.005	0.58	0.0	0.04	15.80	0.00	2.140	7.09	2.49	2.8	97.2	0.0	0.18	0.41	0.79	0.86	3.27	19137	2421	9	0	0	0	0	logfile
✔	8RH0	19164	2025-01-22	2023-12-14	3.44	3.40	3.32	3.4	0.005	0.62	0.0	0.05	14.04	0.01	2.202	6.74	0.00	1.1	98.9	0.0	0.19	0.79	0.85	3.38	3.4	0.003	0.55	0.0	0.04	15.96	0.00	2.515	4.64	2.64	2.2	97.8	0.0	0.31	0.43	0.79	0.86	3.02	19137	2421	9	0	0	0	0	logfile
✔	8RH0	19164	2024-11-19	2023-12-14	3.44	3.40	3.32	3.4	0.005	0.62	0.0	0.05	14.04	0.01	2.202	6.74	0.00	1.1	98.9	0.0	0.19	0.79	0.85	3.38	3.4	0.004	0.56	0.0	0.04	15.79	0.00	2.507	4.72	2.24	2.2	97.8	0.0	0.24	1.27	0.78	0.86	3.15	19137	2421	9	0	0	0	0	logfile
✔	8RH0	19164	2024-10-14	2023-12-14	3.44	3.40	3.32	3.4	0.005	0.62	0.0	0.05	14.04	0.01	2.202	6.74	0.00	1.1	98.9	0.0	0.19	0.79	0.85	3.38	3.4	0.004	0.56	0.0	0.04	15.79	0.00	2.507	4.72	2.24	2.2	97.8	0.0	0.24	1.27	0.78	0.86	3.15	19137	2421	9	0	0	0	0	logfile
✔	8VDE	43147	2024-06-29	2023-12-14	3.4	3.79	3.62	3.7	0.006	0.86	0.0	0.05	13.48	0.01	2.235	1.81	0.09	3.4	96.6	0.0	-1.45	0.59	0.79	2.60	3.7	0.005	0.66	0.0	0.04	16.66	0.00	2.122	9.67	2.20	3.5	96.5	0.0	0.70	0.89	0.61	0.85	1.94	70177	8643	27	0	0	0	0	logfile
✔	8VDE	43147	2025-01-23	2023-12-14	3.4	3.79	3.62	3.7	0.006	0.86	0.0	0.05	13.48	0.01	2.235	1.81	0.09	3.4	96.6	0.0	-1.45	0.59	0.79	2.60	3.7	0.005	0.69	0.0	0.04	16.60	0.00	2.292	6.81	1.66	3.0	97.0	0.0	0.76	0.88	0.61	0.85	1.85	70177	8643	27	0	0	0	0	logfile
✘	8VDE	43147	2024-10-14	2023-12-14	3.4	3.79	3.62	3.7	0.006	0.86	0.0	0.05	13.48	0.01	2.235	1.81	0.09	3.4	96.6	0.0	-1.45	0.59	0.79	2.60	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	70177	8643	27	0	0	0	0	logfile
✔	8VDE	43147	2024-09-28	2023-12-14	3.4	3.79	3.62	3.7	0.006	0.86	0.0	0.05	13.48	0.01	2.235	1.81	0.09	3.4	96.6	0.0	-1.45	0.59	0.79	2.60	3.7	0.006	0.74	0.0	0.04	16.66	0.00	2.299	7.99	1.77	3.5	96.5	0.0	0.52	0.89	0.61	0.85	1.90	70177	8643	27	0	0	0	0	logfile
✔	8VDE	43147	2024-02-17	2023-12-14	3.4	3.79	3.62	3.7	0.006	0.86	0.0	0.05	13.48	0.01	2.235	1.81	0.09	3.4	96.6	0.0	-1.45	0.59	0.79	2.60	3.7	0.005	0.66	0.0	0.04	16.66	0.00	2.122	9.67	2.20	3.5	96.5	0.0	0.70	0.89	0.61	0.85	1.94	70177	8643	27	0	0	0	0	logfile
✔	8XFP	38307	2025-01-17	2023-12-14	3.21	4.06	3.43	3.8	0.002	0.49	0.0	0.04	10.04	0.00	2.101	7.35	2.10	5.8	94.2	0.1	-0.41	0.67	0.76	1.92	3.8	0.006	0.76	0.0	0.05	14.61	0.00	2.478	11.52	3.20	7.5	92.5	0.1	-0.90	1.32	0.66	0.76	1.68	10742	1381	6	0	0	0	0	logfile
✔	8VCH	43136	2025-01-14	2023-12-14	2.55	2.23	2.74	3.3	0.004	0.58	0.0	0.04	15.04	0.00	2.260	5.83	0.78	2.2	97.8	0.0	2.09	0.72	0.80	2.33	3.3	0.003	0.52	0.0	0.04	15.93	0.00	2.545	5.03	2.85	1.9	98.1	0.0	3.15	0.30	0.74	0.82	1.67	7614	1012	6	0	2	0	0	logfile
✔	8VCH	43136	2024-12-28	2023-12-14	2.55	2.23	2.74	3.3	0.004	0.58	0.0	0.04	15.04	0.00	2.260	5.83	0.78	2.2	97.8	0.0	2.09	0.72	0.80	2.33	3.3	0.003	0.53	0.0	0.04	15.95	0.00	2.522	5.23	2.59	2.1	97.9	0.0	2.99	0.29	0.74	0.82	1.58	7614	1012	6	0	2	0	0	logfile
✔	8VCH	43136	2024-11-14	2023-12-14	2.55	2.23	2.74	3.3	0.004	0.58	0.0	0.04	15.04	0.00	2.260	5.83	0.78	2.2	97.8	0.0	2.09	0.72	0.80	2.33	3.3	0.003	0.53	0.0	0.04	15.95	0.00	2.522	5.23	2.59	2.1	97.9	0.0	2.99	0.29	0.74	0.82	1.58	7614	1012	6	0	2	0	0	logfile
✔	8VCH	43136	2024-10-10	2023-12-14	2.55	2.23	2.74	3.3	0.004	0.58	0.0	0.04	15.04	0.00	2.260	5.83	0.78	2.2	97.8	0.0	2.09	0.72	0.80	2.33	3.3	0.003	0.53	0.0	0.04	15.95	0.00	2.522	5.23	2.59	2.1	97.9	0.0	2.99	0.29	0.74	0.82	1.58	7614	1012	6	0	2	0	0	logfile

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