Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8YGG	39249	2024-10-12	2024-02-26	2.98	3.85	3.05	3.4	0.003	0.65	1.0	0.04	15.45	0.00	2.233	9.55	2.07	2.7	97.2	0.1	0.81	0.90	0.88	2.30	3.4	0.004	0.63	0.0	0.04	15.89	0.00	2.478	7.48	2.15	3.4	96.6	0.0	1.04	0.33	0.90	0.89	2.18	12096	1490	2	0	0	0	0	logfile
✔	8YGG	39249	2024-12-30	2024-02-26	2.98	3.85	3.05	3.4	0.003	0.65	1.0	0.04	15.45	0.00	2.233	9.55	2.07	2.7	97.2	0.1	0.81	0.90	0.88	2.30	3.4	0.004	0.63	0.0	0.04	15.89	0.00	2.478	7.48	2.15	3.4	96.6	0.0	1.04	0.33	0.90	0.89	2.18	12096	1490	2	0	0	0	0	logfile
✔	8YGG	39249	2025-01-18	2024-02-26	2.98	3.85	3.05	3.4	0.003	0.65	1.0	0.04	15.45	0.00	2.233	9.55	2.07	2.7	97.2	0.1	0.81	0.90	0.88	2.30	3.4	0.003	0.61	0.0	0.04	15.93	0.00	2.480	7.61	2.00	3.0	97.0	0.0	0.93	0.34	0.90	0.89	2.18	12096	1490	2	0	0	0	0	logfile
✔	8YGG	39249	2024-09-26	2024-02-26	2.98	3.85	3.05	3.4	0.003	0.65	1.0	0.04	15.45	0.00	2.233	9.55	2.07	2.7	97.2	0.1	0.81	0.90	0.88	2.30	3.4	0.004	0.63	0.0	0.04	15.89	0.00	2.478	7.48	2.15	3.4	96.6	0.0	1.04	0.33	0.90	0.89	2.18	12096	1490	2	0	0	0	0	logfile
✔	8YGG	39249	2025-05-14	2024-02-26	2.98	3.85	3.05	3.4	0.003	0.65	1.0	0.04	15.45	0.00	2.233	9.55	2.07	2.7	97.2	0.1	0.81	0.90	0.88	2.30	3.4	0.003	0.61	0.0	0.04	15.93	0.00	2.480	7.61	2.00	3.0	97.0	0.0	0.93	0.34	0.90	0.89	2.18	12096	1490	2	0	0	0	0	logfile
✔	9ASo	43821	2025-01-16	2024-02-26	2.9	3.56	2.94	3.1	0.003	0.60	0.0	0.05	17.62	0.00	2.281	3.38	1.04	1.6	98.4	0.0	1.28	0.80	0.66	2.99	3.1	0.003	0.54	0.0	0.04	17.49	0.00	2.370	3.05	0.58	2.2	97.8	0.0	1.56	0.90	0.88	0.89	2.64	9426	966	6	71	4	2	0	logfile
✔	9ASo	43821	2025-02-13	2024-02-26	2.9	3.56	2.94	3.1	0.003	0.60	0.0	0.05	17.62	0.00	2.281	3.38	1.04	1.6	98.4	0.0	1.28	0.80	0.66	2.99	3.1	0.003	0.54	0.0	0.04	17.49	0.00	2.370	3.05	0.58	2.2	97.8	0.0	1.56	0.90	0.88	0.89	2.64	9426	966	6	71	4	2	0	logfile
✔	9ASK	43817	2024-12-29	2024-02-26	3.6	4.04	3.67	3.9	0.003	0.60	0.0	0.04	18.52	0.00	2.275	14.03	0.40	4.4	95.6	0.0	-1.03	0.71	0.70	0.95	3.9	0.003	0.66	0.0	0.04	18.97	0.00	2.595	12.02	5.27	4.5	95.4	0.1	-0.64	1.06	0.70	0.70	0.85	11564	1482	2	0	0	0	0	logfile
✔	9ASK	43817	2024-11-16	2024-02-26	3.6	4.04	3.67	3.9	0.003	0.60	0.0	0.04	18.52	0.00	2.275	14.03	0.40	4.4	95.6	0.0	-1.03	0.71	0.70	0.95	3.9	0.003	0.66	0.0	0.04	18.97	0.00	2.595	12.02	5.27	4.5	95.4	0.1	-0.64	1.06	0.70	0.70	0.85	11564	1482	2	0	0	0	0	logfile
✔	9ASK	43817	2024-10-12	2024-02-26	3.6	4.04	3.67	3.9	0.003	0.60	0.0	0.04	18.52	0.00	2.275	14.03	0.40	4.4	95.6	0.0	-1.03	0.71	0.70	0.95	3.9	0.003	0.66	0.0	0.04	18.97	0.00	2.595	12.02	5.27	4.5	95.4	0.1	-0.64	1.06	0.70	0.70	0.85	11564	1482	2	0	0	0	0	logfile
✔	9ASK	43817	2024-09-25	2024-02-26	3.6	4.04	3.67	3.9	0.003	0.60	0.0	0.04	18.52	0.00	2.275	14.03	0.40	4.4	95.6	0.0	-1.03	0.71	0.70	0.95	3.9	0.003	0.66	0.0	0.04	18.97	0.00	2.595	12.02	5.27	4.5	95.4	0.1	-0.64	1.06	0.70	0.70	0.85	11564	1482	2	0	0	0	0	logfile
✔	9ASK	43817	2024-08-04	2024-02-26	3.6	4.04	3.67	3.9	0.003	0.60	0.0	0.04	18.52	0.00	2.275	14.03	0.40	4.4	95.6	0.0	-1.03	0.71	0.70	0.95	3.9	0.003	0.66	0.0	0.04	18.97	0.00	2.595	12.02	5.27	4.5	95.4	0.1	-0.64	1.06	0.70	0.70	0.85	11564	1482	2	0	0	0	0	logfile
✔	9ASK	43817	2025-05-14	2024-02-26	3.6	4.04	3.67	3.9	0.003	0.60	0.0	0.04	18.52	0.00	2.275	14.03	0.40	4.4	95.6	0.0	-1.03	0.71	0.70	0.95	3.9	0.003	0.66	0.0	0.04	19.04	0.00	2.488	12.27	4.95	4.6	95.2	0.1	-0.79	1.06	0.70	0.70	0.97	11564	1482	2	0	0	0	0	logfile
✔	9ASK	43817	2025-01-18	2024-02-26	3.6	4.04	3.67	3.9	0.003	0.60	0.0	0.04	18.52	0.00	2.275	14.03	0.40	4.4	95.6	0.0	-1.03	0.71	0.70	0.95	3.9	0.003	0.66	0.0	0.04	19.04	0.00	2.488	12.27	4.95	4.6	95.2	0.1	-0.79	1.06	0.70	0.70	0.97	11564	1482	2	0	0	0	0	logfile
✔	9ASo	43821	2025-03-14	2024-02-26	2.9	3.56	2.93	3.1	0.003	0.60	0.0	0.05	17.62	0.00	2.281	3.38	1.04	1.6	98.4	0.0	1.28	0.80	0.66	2.99	3.1	0.004	0.58	0.0	0.04	17.45	0.00	2.410	3.33	0.58	2.4	97.6	0.0	1.45	0.89	0.88	0.90	2.82	9426	966	6	71	4	2	0	logfile
✔	9ASo	43821	2025-04-30	2024-02-26	2.9	3.56	2.93	3.1	0.003	0.60	0.0	0.05	17.62	0.00	2.281	3.38	1.04	1.6	98.4	0.0	1.28	0.80	0.66	2.99	3.1	0.004	0.57	0.0	0.04	17.46	0.00	2.403	3.22	0.58	2.3	97.7	0.0	1.50	0.89	0.88	0.90	2.68	9426	966	6	71	4	2	0	logfile
✔	9ASo	43821	2025-05-13	2024-02-26	2.9	3.56	2.93	3.1	0.003	0.60	0.0	0.05	17.62	0.00	2.281	3.38	1.04	1.6	98.4	0.0	1.28	0.80	0.66	2.99	3.1	0.006	0.63	0.0	0.04	17.51	0.00	2.432	3.71	0.81	2.7	97.3	0.0	1.28	0.90	0.89	0.90	2.80	9426	966	6	71	4	2	0	logfile
✘	9ASo	43821	2024-09-25	2024-02-26	2.9	3.56	2.94	3.1	0.003	0.60	0.0	0.05	17.62	0.00	2.281	3.38	1.04	1.6	98.4	0.0	1.28	0.80	0.66	2.99	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9426	966	6	71	4	2	0	logfile
✔	9ASM	43819	2025-01-18	2024-02-26	2.8	3.54	2.88	3.1	0.003	0.51	0.0	0.04	17.97	0.00	2.283	3.96	1.04	2.7	97.3	0.0	1.39	0.75	0.63	2.90	3.1	0.003	0.54	0.0	0.04	17.78	0.00	2.255	3.28	0.57	3.3	96.7	0.0	1.97	0.92	0.84	0.90	2.61	11648	1180	6	95	4	2	0	logfile
✔	8YGH	39250	2025-05-14	2024-02-26	2.77	3.71	2.80	3.3	0.003	0.64	0.0	0.04	16.16	0.00	2.230	9.85	1.74	4.3	95.7	0.0	0.53	0.90	0.88	2.42	3.3	0.003	0.61	0.0	0.04	16.45	0.00	2.403	6.91	1.21	4.5	95.5	0.0	0.43	0.30	0.90	0.88	2.26	12244	1510	2	0	0	0	0	logfile

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