Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8VCR	43139	2024-08-06	2023-12-14	3.0	2.18	3.02	2.0	0.008	0.77	0.0	0.05	13.52	0.01	2.139	3.13	0.00	4.0	96.0	0.0	0.07	0.80	0.80	3.92	1.9	0.008	0.72	0.0	0.05	15.86	0.01	2.461	5.00	2.23	3.6	96.4	0.0	0.64	0.40	0.81	0.82	4.04	15987	2040	18	0	21	0	0	logfile
✔	8VCR	43139	2024-11-18	2023-12-14	3.0	2.18	3.02	2.0	0.008	0.77	0.0	0.05	13.52	0.01	2.139	3.13	0.00	4.0	96.0	0.0	0.07	0.80	0.80	3.92	1.9	0.008	0.72	0.0	0.05	15.86	0.01	2.461	5.00	2.23	3.6	96.4	0.0	0.64	0.40	0.81	0.82	4.04	15987	2040	18	0	21	0	0	logfile
✔	8VCJ	43138	2024-08-11	2023-12-14	3.32	3.63	3.39	3.6	0.003	0.64	0.0	0.04	17.52	0.00	2.002	4.69	0.03	4.6	95.4	0.0	-0.73	0.69	0.83	2.26	3.6	0.004	0.72	1.0	0.04	18.60	0.00	1.680	5.13	1.51	5.0	95.0	0.0	-0.44	0.92	0.69	0.84	2.02	32232	3742	20	100	16	0	0	logfile
✔	8VCR	43139	2024-12-31	2023-12-14	3.0	2.18	3.02	2.0	0.008	0.77	0.0	0.05	13.52	0.01	2.139	3.13	0.00	4.0	96.0	0.0	0.07	0.80	0.80	3.92	1.9	0.008	0.72	0.0	0.05	15.86	0.01	2.461	5.00	2.23	3.6	96.4	0.0	0.64	0.40	0.81	0.82	4.04	15987	2040	18	0	21	0	0	logfile
✘	8VCR	43139	2025-01-20	2023-12-14	3.0	2.18	3.02	2.0	0.008	0.77	0.0	0.05	13.52	0.01	2.139	3.13	0.00	4.0	96.0	0.0	0.07	0.80	0.80	3.92	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	15987	2040	18	0	21	0	0	logfile
✔	8VCR	43139	2024-09-27	2023-12-14	3.0	2.18	3.02	2.0	0.008	0.77	0.0	0.05	13.52	0.01	2.139	3.13	0.00	4.0	96.0	0.0	0.07	0.80	0.80	3.92	1.9	0.008	0.72	0.0	0.05	15.86	0.01	2.461	5.00	2.23	3.6	96.4	0.0	0.64	0.40	0.81	0.82	4.04	15987	2040	18	0	21	0	0	logfile
✔	8VCR	43139	2024-10-13	2023-12-14	3.0	2.18	3.02	2.0	0.008	0.77	0.0	0.05	13.52	0.01	2.139	3.13	0.00	4.0	96.0	0.0	0.07	0.80	0.80	3.92	1.9	0.008	0.72	0.0	0.05	15.86	0.01	2.461	5.00	2.23	3.6	96.4	0.0	0.64	0.40	0.81	0.82	4.04	15987	2040	18	0	21	0	0	logfile
✔	8VCV	43141	2025-01-17	2023-12-14	2.8	3.10	2.90	3.1	0.006	0.93	0.0	0.05	15.78	0.01	2.095	3.17	0.00	2.5	97.5	0.0	-0.59	0.62	0.86	6.05	3.1	0.003	0.60	0.0	0.04	13.34	0.00	2.436	4.91	2.58	1.9	98.1	0.0	0.39	0.36	0.59	0.87	5.04	10466	1035	38	0	311	0	0	logfile
✔	8VCV	43141	2025-02-14	2023-12-14	2.8	3.10	2.90	3.1	0.006	0.93	0.0	0.05	15.78	0.01	2.095	3.17	0.00	2.5	97.5	0.0	-0.59	0.62	0.86	6.05	3.1	0.003	0.60	0.0	0.04	13.34	0.00	2.436	4.91	2.58	1.9	98.1	0.0	0.39	0.36	0.59	0.87	5.04	10466	1035	38	0	311	0	0	logfile
✔	8XFS	38308	2025-01-17	2023-12-14	3.2	3.86	3.31	3.7	0.002	0.52	0.0	0.04	10.31	0.00	2.191	6.68	2.74	5.1	94.8	0.1	0.23	0.70	0.79	2.61	3.7	0.003	0.63	0.0	0.04	13.63	0.00	2.462	6.27	2.41	5.3	94.6	0.1	0.09	0.42	0.67	0.79	2.18	10983	1419	6	0	0	0	0	logfile
✔	8XFS	38308	2024-12-29	2023-12-14	3.2	3.86	3.31	3.7	0.002	0.52	0.0	0.04	10.31	0.00	2.191	6.68	2.74	5.1	94.8	0.1	0.23	0.70	0.79	2.61	3.7	0.005	0.71	0.0	0.04	13.58	0.00	2.402	7.78	2.82	6.5	93.4	0.1	-0.16	0.46	0.65	0.78	2.40	10983	1419	6	0	0	0	0	logfile
✔	8VCV	43141	2024-11-16	2023-12-14	2.8	3.10	2.90	3.1	0.006	0.93	0.0	0.05	15.78	0.01	2.095	3.17	0.00	2.5	97.5	0.0	-0.59	0.62	0.86	6.05	3.1	0.003	0.60	0.0	0.04	13.51	0.00	2.516	4.86	1.83	2.1	97.9	0.0	0.12	0.38	0.59	0.87	5.15	10466	1035	38	0	311	0	0	logfile
✔	8VCV	43141	2024-12-29	2023-12-14	2.8	3.10	2.90	3.1	0.006	0.93	0.0	0.05	15.78	0.01	2.095	3.17	0.00	2.5	97.5	0.0	-0.59	0.62	0.86	6.05	3.1	0.003	0.60	0.0	0.04	13.51	0.00	2.516	4.86	1.83	2.1	97.9	0.0	0.12	0.38	0.59	0.87	5.15	10466	1035	38	0	311	0	0	logfile
✔	8VCV	43141	2024-10-11	2023-12-14	2.8	3.10	2.90	3.1	0.006	0.93	0.0	0.05	15.78	0.01	2.095	3.17	0.00	2.5	97.5	0.0	-0.59	0.62	0.86	6.05	3.1	0.003	0.60	0.0	0.04	13.51	0.00	2.516	4.86	1.83	2.1	97.9	0.0	0.12	0.38	0.59	0.87	5.15	10466	1035	38	0	311	0	0	logfile
✔	8XFP	38307	2025-01-17	2023-12-14	3.21	4.06	3.43	3.8	0.002	0.49	0.0	0.04	10.04	0.00	2.101	7.35	2.10	5.8	94.2	0.1	-0.41	0.67	0.76	1.92	3.8	0.006	0.76	0.0	0.05	14.61	0.00	2.478	11.52	3.20	7.5	92.5	0.1	-0.90	1.32	0.66	0.76	1.68	10742	1381	6	0	0	0	0	logfile
✔	8VCT	43140	2024-08-10	2023-12-14	3.83	4.11	3.90	4.1	0.003	0.69	0.0	0.04	18.15	0.01	2.070	6.37	0.00	4.0	96.0	0.0	-1.11	0.69	0.76	1.24	4.1	0.004	0.67	0.0	0.04	19.69	0.00	1.895	7.63	2.76	5.2	94.7	0.0	-0.73	0.45	0.70	0.76	1.05	29000	3338	18	100	14	0	0	logfile
✔	8XFT	38309	2025-01-15	2023-12-14	3.24	3.25	2.62	3.2	0.003	0.52	0.0	0.04	10.57	0.00	2.208	6.93	1.54	5.5	94.5	0.0	0.22	0.68	0.83	3.29	3.2	0.003	0.60	0.0	0.04	13.65	0.00	2.407	6.70	2.68	6.1	93.9	0.0	0.29	0.37	0.74	0.87	2.99	8742	1122	4	0	0	0	0	logfile
✔	8XFT	38309	2024-12-28	2023-12-14	3.24	3.25	2.62	3.2	0.003	0.52	0.0	0.04	10.57	0.00	2.208	6.93	1.54	5.5	94.5	0.0	0.22	0.68	0.83	3.29	3.2	0.002	0.60	0.0	0.04	13.53	0.00	2.410	6.93	2.57	5.2	94.8	0.0	0.32	0.38	0.73	0.86	2.84	8742	1122	4	0	0	0	0	logfile
✔	8XFT	38309	2025-03-13	2023-12-14	3.24	3.25	2.61	3.2	0.003	0.52	0.0	0.04	10.57	0.00	2.208	6.93	1.54	5.5	94.5	0.0	0.22	0.68	0.83	3.29	3.2	0.004	0.66	0.0	0.05	13.68	0.00	2.357	6.93	2.47	6.4	93.6	0.0	0.26	0.37	0.74	0.87	2.92	8742	1122	4	0	0	0	0	logfile
✔	8XFT	38309	2025-02-13	2023-12-14	3.24	3.25	2.62	3.2	0.003	0.52	0.0	0.04	10.57	0.00	2.208	6.93	1.54	5.5	94.5	0.0	0.22	0.68	0.83	3.29	3.2	0.003	0.60	0.0	0.04	13.65	0.00	2.407	6.70	2.68	6.1	93.9	0.0	0.29	0.37	0.74	0.87	2.99	8742	1122	4	0	0	0	0	logfile

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