Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8YGH	39250	2024-09-26	2024-02-26	2.77	3.71	2.80	3.3	0.003	0.64	0.0	0.04	16.16	0.00	2.230	9.85	1.74	4.3	95.7	0.0	0.53	0.90	0.88	2.42	3.3	0.004	0.64	0.0	0.04	16.42	0.00	2.403	7.64	1.21	4.5	95.5	0.0	0.39	0.30	0.90	0.88	2.28	12244	1510	2	0	0	0	0	logfile
✔	8YGH	39250	2025-01-18	2024-02-26	2.77	3.71	2.80	3.3	0.003	0.64	0.0	0.04	16.16	0.00	2.230	9.85	1.74	4.3	95.7	0.0	0.53	0.90	0.88	2.42	3.3	0.003	0.61	0.0	0.04	16.45	0.00	2.403	6.91	1.21	4.5	95.5	0.0	0.43	0.30	0.90	0.88	2.26	12244	1510	2	0	0	0	0	logfile
✔	9ASP	43822	2024-12-30	2024-02-26	3.2	4.18	3.26	3.3	0.004	0.62	0.0	0.04	19.27	0.00	2.196	10.51	0.09	5.1	94.9	0.0	0.10	0.77	0.67	1.49	3.2	0.003	0.56	0.0	0.04	19.45	0.00	2.492	6.84	2.15	4.7	95.3	0.0	0.43	1.21	0.83	0.84	1.51	12227	1256	6	96	4	1	0	logfile
✔	9ASP	43822	2024-11-16	2024-02-26	3.2	4.18	3.26	3.3	0.004	0.62	0.0	0.04	19.27	0.00	2.196	10.51	0.09	5.1	94.9	0.0	0.10	0.77	0.67	1.49	3.2	0.003	0.56	0.0	0.04	19.45	0.00	2.492	6.84	2.15	4.7	95.3	0.0	0.43	1.21	0.83	0.84	1.51	12227	1256	6	96	4	1	0	logfile
✔	8YGE	39245	2025-01-19	2024-02-26	2.76	3.69	2.79	3.2	0.006	0.59	0.0	0.04	17.86	0.00	1.476	6.74	1.62	4.7	95.2	0.1	0.62	0.90	0.89	2.27	3.2	0.003	0.60	0.0	0.04	18.16	0.00	2.036	6.10	1.69	3.6	96.3	0.1	1.00	0.86	0.90	0.89	2.17	13479	1558	8	40	5	0	0	logfile
✔	8YGE	39245	2025-05-15	2024-02-26	2.76	3.69	2.80	3.2	0.006	0.59	0.0	0.04	17.86	0.00	1.476	6.74	1.62	4.7	95.2	0.1	0.62	0.90	0.89	2.27	3.2	0.003	0.60	0.0	0.04	18.16	0.00	2.036	6.10	1.69	3.6	96.3	0.1	1.00	0.86	0.90	0.89	2.17	13479	1558	8	40	5	0	0	logfile
✔	8YGE	39245	2024-09-26	2024-02-26	2.76	3.69	2.79	3.2	0.006	0.59	0.0	0.04	17.86	0.00	1.476	6.74	1.62	4.7	95.2	0.1	0.62	0.90	0.89	2.27	3.2	0.003	0.60	0.0	0.04	18.13	0.00	2.040	6.25	1.32	3.9	96.0	0.1	0.97	0.87	0.90	0.89	2.11	13479	1558	8	40	5	0	0	logfile
✔	8YGE	39245	2024-10-12	2024-02-26	2.76	3.69	2.79	3.2	0.006	0.59	0.0	0.04	17.86	0.00	1.476	6.74	1.62	4.7	95.2	0.1	0.62	0.90	0.89	2.27	3.2	0.003	0.60	0.0	0.04	18.13	0.00	2.040	6.25	1.32	3.9	96.0	0.1	0.97	0.87	0.90	0.89	2.11	13479	1558	8	40	5	0	0	logfile
✔	9ASP	43822	2024-10-12	2024-02-26	3.2	4.18	3.26	3.3	0.004	0.62	0.0	0.04	19.27	0.00	2.196	10.51	0.09	5.1	94.9	0.0	0.10	0.77	0.67	1.49	3.2	0.003	0.56	0.0	0.04	19.45	0.00	2.492	6.84	2.15	4.7	95.3	0.0	0.43	1.21	0.83	0.84	1.51	12227	1256	6	96	4	1	0	logfile
✔	9ASP	43822	2024-09-26	2024-02-26	3.2	4.18	3.26	3.3	0.004	0.62	0.0	0.04	19.27	0.00	2.196	10.51	0.09	5.1	94.9	0.0	0.10	0.77	0.67	1.49	3.2	0.003	0.56	0.0	0.04	19.45	0.00	2.492	6.84	2.15	4.7	95.3	0.0	0.43	1.21	0.83	0.84	1.51	12227	1256	6	96	4	1	0	logfile
✔	9ASK	43817	2024-09-25	2024-02-26	3.6	4.04	3.67	3.9	0.003	0.60	0.0	0.04	18.52	0.00	2.275	14.03	0.40	4.4	95.6	0.0	-1.03	0.71	0.70	0.95	3.9	0.003	0.66	0.0	0.04	18.97	0.00	2.595	12.02	5.27	4.5	95.4	0.1	-0.64	1.06	0.70	0.70	0.85	11564	1482	2	0	0	0	0	logfile
✔	9ASP	43822	2025-01-18	2024-02-26	3.2	4.18	3.26	3.3	0.004	0.62	0.0	0.04	19.27	0.00	2.196	10.51	0.09	5.1	94.9	0.0	0.10	0.77	0.67	1.49	3.2	0.003	0.54	0.0	0.04	19.29	0.00	2.501	6.71	1.88	4.9	95.1	0.0	0.54	1.20	0.83	0.84	1.53	12227	1256	6	96	4	1	0	logfile
✔	9ASN	43820	2024-09-26	2024-02-26	3.2	4.03	3.21	3.2	0.005	0.61	0.0	0.04	17.26	0.00	2.197	6.23	0.00	3.6	96.4	0.0	1.14	0.77	0.69	2.28	3.2	0.004	0.54	0.0	0.04	17.41	0.00	2.262	4.26	0.66	3.4	96.6	0.0	1.54	0.31	0.83	0.86	2.01	11697	1184	6	97	4	2	0	logfile
✔	9ASN	43820	2025-01-18	2024-02-26	3.2	4.03	3.21	3.2	0.005	0.61	0.0	0.04	17.26	0.00	2.197	6.23	0.00	3.6	96.4	0.0	1.14	0.77	0.69	2.28	3.2	0.003	0.53	0.0	0.04	17.43	0.00	2.259	4.48	0.85	3.5	96.5	0.0	1.56	1.15	0.83	0.87	1.99	11697	1184	6	97	4	2	0	logfile
✔	9ASN	43820	2025-05-14	2024-02-26	3.2	4.03	3.21	3.2	0.005	0.61	0.0	0.04	17.26	0.00	2.197	6.23	0.00	3.6	96.4	0.0	1.14	0.77	0.69	2.28	3.2	0.003	0.51	0.0	0.03	17.43	0.00	2.274	4.35	0.66	3.1	96.9	0.0	1.61	1.15	0.83	0.86	2.03	11697	1184	6	97	4	2	0	logfile
✔	8YGE	39245	2024-11-17	2024-02-26	2.76	3.69	2.79	3.2	0.006	0.59	0.0	0.04	17.86	0.00	1.476	6.74	1.62	4.7	95.2	0.1	0.62	0.90	0.89	2.27	3.2	0.003	0.60	0.0	0.04	18.13	0.00	2.040	6.25	1.32	3.9	96.0	0.1	0.97	0.87	0.90	0.89	2.11	13479	1558	8	40	5	0	0	logfile
✔	8YGE	39245	2024-12-30	2024-02-26	2.76	3.69	2.79	3.2	0.006	0.59	0.0	0.04	17.86	0.00	1.476	6.74	1.62	4.7	95.2	0.1	0.62	0.90	0.89	2.27	3.2	0.003	0.60	0.0	0.04	18.13	0.00	2.040	6.25	1.32	3.9	96.0	0.1	0.97	0.87	0.90	0.89	2.11	13479	1558	8	40	5	0	0	logfile
✔	8YGH	39250	2025-05-14	2024-02-26	2.77	3.71	2.80	3.3	0.003	0.64	0.0	0.04	16.16	0.00	2.230	9.85	1.74	4.3	95.7	0.0	0.53	0.90	0.88	2.42	3.3	0.003	0.61	0.0	0.04	16.45	0.00	2.403	6.91	1.21	4.5	95.5	0.0	0.43	0.30	0.90	0.88	2.26	12244	1510	2	0	0	0	0	logfile
✔	9ASP	43822	2025-05-14	2024-02-26	3.2	4.18	3.27	3.2	0.004	0.62	0.0	0.04	19.27	0.00	2.196	10.51	0.09	5.1	94.9	0.0	0.10	0.77	0.67	1.49	3.2	0.003	0.54	0.0	0.04	19.37	0.00	2.497	6.71	1.79	4.3	95.7	0.0	0.49	1.20	0.83	0.84	1.53	12227	1256	6	96	4	1	0	logfile
✔	9ASK	43817	2024-10-12	2024-02-26	3.6	4.04	3.67	3.9	0.003	0.60	0.0	0.04	18.52	0.00	2.275	14.03	0.40	4.4	95.6	0.0	-1.03	0.71	0.70	0.95	3.9	0.003	0.66	0.0	0.04	18.97	0.00	2.595	12.02	5.27	4.5	95.4	0.1	-0.64	1.06	0.70	0.70	0.85	11564	1482	2	0	0	0	0	logfile

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