Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8W22	43737	2024-09-23	2024-02-19	4.0	4.25	3.95	4.2	0.008	1.27	0.0	0.06	8.00	0.00	2.497	0.92	0.00	2.8	96.8	0.3	0.30	0.71	0.74	—	4.1	0.004	0.69	0.0	0.04	12.25	0.00	2.610	3.36	3.89	5.2	94.8	0.0	-0.02	0.76	0.73	0.78	—	3750	629	3	0	0	0	0	logfile
✔	8W22	43737	2024-10-09	2024-02-19	4.0	4.25	3.95	4.2	0.008	1.27	0.0	0.06	8.00	0.00	2.497	0.92	0.00	2.8	96.8	0.3	0.30	0.71	0.74	—	4.1	0.004	0.69	0.0	0.04	12.25	0.00	2.610	3.36	3.89	5.2	94.8	0.0	-0.02	0.76	0.73	0.78	—	3750	629	3	0	0	0	0	logfile
✔	8W22	43737	2024-11-14	2024-02-19	4.0	4.25	3.95	4.2	0.008	1.27	0.0	0.06	8.00	0.00	2.497	0.92	0.00	2.8	96.8	0.3	0.30	0.71	0.74	—	4.1	0.004	0.69	0.0	0.04	12.25	0.00	2.610	3.36	3.89	5.2	94.8	0.0	-0.02	0.76	0.73	0.78	—	3750	629	3	0	0	0	0	logfile
✔	8YDB	39167	2024-09-29	2024-02-19	3.4	4.36	3.41	3.7	0.003	0.58	0.0	0.04	19.62	0.00	2.225	5.90	0.42	6.2	93.8	0.0	-0.84	0.88	0.76	2.54	3.7	0.003	0.75	1.0	0.04	19.62	0.00	2.298	7.77	1.92	6.2	93.8	0.0	-0.11	0.47	0.93	0.90	2.53	23880	2682	12	103	0	0	0	logfile
✔	8YDB	39167	2025-01-25	2024-02-19	3.4	4.36	3.41	3.7	0.003	0.58	0.0	0.04	19.62	0.00	2.225	5.90	0.42	6.2	93.8	0.0	-0.84	0.88	0.76	2.54	3.7	0.004	0.60	0.0	0.04	19.66	0.00	2.471	7.17	3.35	6.5	93.5	0.0	-0.19	0.46	0.93	0.90	2.59	23880	2682	12	103	0	0	0	logfile
✔	8S35	19688	2025-01-14	2024-02-19	2.9	4.25	3.12	3.6	0.004	0.73	0.0	0.04	18.95	0.00	1.971	9.69	0.82	0.3	99.7	0.0	-0.29	0.90	0.82	1.67	3.6	0.008	0.73	0.0	0.04	19.26	0.00	2.255	13.65	1.23	5.7	94.3	0.0	-0.09	0.37	0.90	0.83	1.80	48653	2936	13	112	1	0	23571	logfile
✔	8S37	19690	2024-12-27	2024-02-19	2.9	4.24	3.10	3.6	0.004	0.66	0.0	0.04	16.55	0.01	2.017	9.09	0.90	0.3	99.6	0.1	-1.05	0.89	0.82	2.07	3.6	0.005	0.67	0.0	0.04	17.44	0.00	2.262	10.36	1.02	5.2	94.6	0.1	0.50	0.41	0.90	0.82	2.17	49005	2947	13	107	1	0	23920	logfile
✔	8S37	19690	2025-01-14	2024-02-19	2.9	4.24	3.10	3.6	0.004	0.66	0.0	0.04	16.55	0.01	2.017	9.09	0.90	0.3	99.6	0.1	-1.05	0.89	0.82	2.07	3.6	0.005	0.67	0.0	0.04	17.47	0.00	2.231	10.46	1.02	4.9	94.9	0.1	0.48	0.43	0.90	0.82	2.13	49005	2947	13	107	1	0	23920	logfile
✔	8S37	19690	2024-11-18	2024-02-19	2.9	4.24	3.10	3.6	0.004	0.66	0.0	0.04	16.55	0.01	2.017	9.09	0.90	0.3	99.6	0.1	-1.05	0.89	0.82	2.07	3.6	0.005	0.67	0.0	0.04	17.44	0.00	2.262	10.36	1.02	5.2	94.6	0.1	0.50	0.41	0.90	0.82	2.17	49005	2947	13	107	1	0	23920	logfile
✔	8YDB	39167	2025-05-23	2024-02-19	3.4	4.36	3.41	3.7	0.003	0.58	0.0	0.04	19.62	0.00	2.225	5.90	0.42	6.2	93.8	0.0	-0.84	0.88	0.76	2.54	3.7	0.004	0.60	0.0	0.04	19.66	0.00	2.471	7.17	3.35	6.5	93.5	0.0	-0.19	0.46	0.93	0.90	2.59	23880	2682	12	103	0	0	0	logfile
✔	8YDB	39167	2024-08-08	2024-02-19	3.4	4.36	3.41	3.7	0.003	0.58	0.0	0.04	19.62	0.00	2.225	5.90	0.42	6.2	93.8	0.0	-0.84	0.88	0.76	2.54	3.7	0.003	0.75	1.0	0.04	19.62	0.00	2.298	7.77	1.92	6.2	93.8	0.0	-0.11	0.47	0.93	0.90	2.53	23880	2682	12	103	0	0	0	logfile
✔	8S35	19688	2024-11-18	2024-02-19	2.9	4.25	3.12	3.6	0.004	0.73	0.0	0.04	18.95	0.00	1.971	9.69	0.82	0.3	99.7	0.0	-0.29	0.90	0.82	1.67	3.6	0.003	0.64	0.0	0.04	19.27	0.00	2.233	11.14	0.98	4.4	95.6	0.0	0.23	0.37	0.90	0.82	1.93	48653	2936	13	112	1	0	23571	logfile
✔	8S35	19688	2024-12-27	2024-02-19	2.9	4.25	3.12	3.6	0.004	0.73	0.0	0.04	18.95	0.00	1.971	9.69	0.82	0.3	99.7	0.0	-0.29	0.90	0.82	1.67	3.6	0.003	0.64	0.0	0.04	19.27	0.00	2.233	11.14	0.98	4.4	95.6	0.0	0.23	0.37	0.90	0.82	1.93	48653	2936	13	112	1	0	23571	logfile
✔	8S36	19689	2024-11-18	2024-02-19	2.9	4.24	3.06	3.7	0.004	0.73	0.0	0.04	18.44	0.01	1.959	10.07	0.81	0.5	99.4	0.1	-1.16	0.89	0.81	1.87	3.6	0.005	0.66	0.0	0.04	18.69	0.00	2.261	10.11	1.10	4.4	95.5	0.1	0.35	1.17	0.89	0.82	1.89	47348	2838	13	108	1	0	23099	logfile
✔	8S36	19689	2025-01-13	2024-02-19	2.9	4.24	3.06	3.7	0.004	0.73	0.0	0.04	18.44	0.01	1.959	10.07	0.81	0.5	99.4	0.1	-1.16	0.89	0.81	1.87	3.6	0.004	0.66	0.0	0.04	18.67	0.00	2.258	10.39	0.97	4.4	95.5	0.1	0.27	1.17	0.89	0.82	1.91	47348	2838	13	108	1	0	23099	logfile
✔	8S36	19689	2024-12-27	2024-02-19	2.9	4.24	3.06	3.7	0.004	0.73	0.0	0.04	18.44	0.01	1.959	10.07	0.81	0.5	99.4	0.1	-1.16	0.89	0.81	1.87	3.6	0.005	0.66	0.0	0.04	18.69	0.00	2.261	10.11	1.10	4.4	95.5	0.1	0.35	1.17	0.89	0.82	1.89	47348	2838	13	108	1	0	23099	logfile
✔	8YC0	39128	2024-12-27	2024-02-17	4.12	4.24	3.86	4.2	0.004	0.77	0.0	0.04	17.51	0.00	2.114	14.18	0.58	7.6	92.4	0.0	-0.95	0.50	0.65	—	4.2	0.004	0.76	0.0	0.04	14.05	0.00	2.455	12.03	0.00	7.4	92.6	0.0	-0.77	1.32	0.61	0.73	—	4635	583	9	0	1	0	0	logfile
✔	8YC0	39128	2025-05-10	2024-02-17	4.12	4.24	3.85	4.2	0.004	0.78	0.0	0.04	17.51	0.00	2.114	14.18	0.58	7.6	92.4	0.0	-0.95	0.50	0.65	—	4.2	0.003	0.77	0.0	0.04	13.88	0.00	2.467	10.21	0.00	8.0	92.0	0.0	-0.70	1.34	0.60	0.71	—	4635	583	9	0	1	0	0	logfile
✔	8YC0	39128	2024-08-02	2024-02-17	4.12	4.24	3.86	4.2	0.004	0.77	0.0	0.04	17.51	0.00	2.114	14.18	0.58	7.6	92.4	0.0	-0.95	0.50	0.65	—	4.2	0.004	0.76	0.0	0.04	14.05	0.00	2.455	12.03	0.00	7.4	92.6	0.0	-0.77	1.32	0.61	0.73	—	4635	583	9	0	1	0	0	logfile
✔	8YC0	39128	2025-04-27	2024-02-17	4.12	4.24	3.85	4.2	0.004	0.78	0.0	0.04	17.51	0.00	2.114	14.18	0.58	7.6	92.4	0.0	-0.95	0.50	0.65	—	4.2	0.004	0.79	0.0	0.04	13.90	0.00	2.461	10.64	0.00	6.5	93.5	0.0	-0.82	1.34	0.61	0.72	—	4635	583	9	0	1	0	0	logfile

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