The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8XCW | 38257 | 2024-08-02 | 2023-12-10 | 2.87 | 3.04 | 1.36 | 3.0 | 0.009 | 1.10 | 0.0 | 0.06 | 16.21 | 0.01 | 2.363 | 4.68 | 3.54 | 2.2 | 97.8 | 0.0 | 1.28 | 0.49 | 0.89 | 4.44 | 3.0 | 0.003 | 0.53 | 0.0 | 0.04 | 16.94 | 0.00 | 2.428 | 4.98 | 1.47 | 2.7 | 97.3 | 0.0 | 1.91 | 0.41 | 0.48 | 0.92 | 3.31 | 3347 | 416 | 2 | 0 | 2 | 17 | 0 | logfile |
✔ | 8XCW | 38257 | 2024-09-23 | 2023-12-10 | 2.87 | 3.04 | 1.36 | 3.0 | 0.009 | 1.10 | 0.0 | 0.06 | 16.21 | 0.01 | 2.363 | 4.68 | 3.54 | 2.2 | 97.8 | 0.0 | 1.28 | 0.49 | 0.89 | 4.44 | 3.0 | 0.003 | 0.53 | 0.0 | 0.04 | 16.94 | 0.00 | 2.428 | 4.98 | 1.47 | 2.7 | 97.3 | 0.0 | 1.91 | 0.41 | 0.48 | 0.92 | 3.31 | 3347 | 416 | 2 | 0 | 2 | 17 | 0 | logfile |
✔ | 8XCW | 38257 | 2024-10-09 | 2023-12-10 | 2.87 | 3.04 | 1.36 | 3.0 | 0.009 | 1.10 | 0.0 | 0.06 | 16.21 | 0.01 | 2.363 | 4.68 | 3.54 | 2.2 | 97.8 | 0.0 | 1.28 | 0.49 | 0.89 | 4.44 | 3.0 | 0.003 | 0.53 | 0.0 | 0.04 | 16.94 | 0.00 | 2.428 | 4.98 | 1.47 | 2.7 | 97.3 | 0.0 | 1.91 | 0.41 | 0.48 | 0.92 | 3.31 | 3347 | 416 | 2 | 0 | 2 | 17 | 0 | logfile |
✔ | 8XCW | 38257 | 2024-11-14 | 2023-12-10 | 2.87 | 3.04 | 1.36 | 3.0 | 0.009 | 1.10 | 0.0 | 0.06 | 16.21 | 0.01 | 2.363 | 4.68 | 3.54 | 2.2 | 97.8 | 0.0 | 1.28 | 0.49 | 0.89 | 4.44 | 3.0 | 0.003 | 0.53 | 0.0 | 0.04 | 16.94 | 0.00 | 2.428 | 4.98 | 1.47 | 2.7 | 97.3 | 0.0 | 1.91 | 0.41 | 0.48 | 0.92 | 3.31 | 3347 | 416 | 2 | 0 | 2 | 17 | 0 | logfile |
✔ | 8XCW | 38257 | 2025-01-13 | 2023-12-10 | 2.87 | 3.04 | 1.36 | 3.0 | 0.009 | 1.10 | 0.0 | 0.06 | 16.21 | 0.01 | 2.363 | 4.68 | 3.54 | 2.2 | 97.8 | 0.0 | 1.28 | 0.49 | 0.89 | 4.44 | 3.0 | 0.002 | 0.50 | 0.0 | 0.04 | 16.93 | 0.00 | 2.442 | 4.83 | 0.88 | 2.7 | 97.3 | 0.0 | 1.93 | 0.41 | 0.48 | 0.91 | 3.23 | 3347 | 416 | 2 | 0 | 2 | 17 | 0 | logfile |
✔ | 8XCW | 38257 | 2024-12-27 | 2023-12-10 | 2.87 | 3.04 | 1.36 | 3.0 | 0.009 | 1.10 | 0.0 | 0.06 | 16.21 | 0.01 | 2.363 | 4.68 | 3.54 | 2.2 | 97.8 | 0.0 | 1.28 | 0.49 | 0.89 | 4.44 | 3.0 | 0.003 | 0.53 | 0.0 | 0.04 | 16.94 | 0.00 | 2.428 | 4.98 | 1.47 | 2.7 | 97.3 | 0.0 | 1.91 | 0.41 | 0.48 | 0.92 | 3.31 | 3347 | 416 | 2 | 0 | 2 | 17 | 0 | logfile |
✔ | 8XCW | 38257 | 2024-02-13 | 2023-12-10 | 2.87 | 3.04 | 1.36 | 3.0 | 0.009 | 1.10 | 0.0 | 0.06 | 16.21 | 0.01 | 2.363 | 4.68 | 3.54 | 2.2 | 97.8 | 0.0 | 1.28 | 0.49 | 0.89 | 4.44 | 3.0 | 0.004 | 0.51 | 0.0 | 0.04 | 16.81 | 0.00 | 2.215 | 6.94 | 2.95 | 2.4 | 97.6 | 0.0 | 2.00 | 0.42 | 0.49 | 0.92 | 3.47 | 3347 | 416 | 2 | 0 | 2 | 17 | 0 | logfile |
✔ | 8XCT | 38254 | 2024-10-09 | 2023-12-10 | 2.87 | 3.06 | — | 3.0 | 0.009 | 1.09 | 0.0 | 0.06 | 16.21 | 0.01 | 2.278 | 4.37 | 5.00 | 2.2 | 97.8 | 0.0 | 1.25 | 0.45 | 0.88 | 4.06 | 3.0 | 0.005 | 0.56 | 0.0 | 0.04 | 16.54 | 0.00 | 2.478 | 4.07 | 1.18 | 3.4 | 96.4 | 0.2 | 1.55 | 1.73 | 0.43 | 0.90 | 4.40 | 3358 | 417 | 2 | 0 | 1 | 28 | 0 | logfile |
✔ | 8RED | 19083 | 2024-07-25 | 2023-12-10 | 3.9 | 4.13 | 3.86 | 3.8 | 0.005 | 0.68 | 0.0 | 0.04 | 19.76 | 0.01 | 2.088 | 10.12 | 0.41 | 6.4 | 93.5 | 0.0 | -0.58 | 0.80 | 0.75 | 1.60 | 3.8 | 0.004 | 0.64 | 0.0 | 0.04 | 19.70 | 0.00 | 1.920 | 11.17 | 3.29 | 6.2 | 93.8 | 0.0 | 0.03 | 1.19 | 0.88 | 0.84 | 1.31 | 28878 | 3617 | 10 | 105 | 3 | 0 | 0 | logfile |
✔ | 8RED | 19083 | 2024-08-10 | 2023-12-10 | 3.9 | 4.13 | 3.86 | 3.8 | 0.005 | 0.68 | 0.0 | 0.04 | 19.76 | 0.01 | 2.088 | 10.12 | 0.41 | 6.4 | 93.5 | 0.0 | -0.58 | 0.80 | 0.75 | 1.60 | 3.8 | 0.003 | 0.64 | 0.0 | 0.04 | 19.75 | 0.00 | 1.952 | 8.71 | 2.32 | 5.5 | 94.5 | 0.0 | -0.03 | 1.18 | 0.88 | 0.84 | 1.42 | 28878 | 3617 | 10 | 105 | 3 | 0 | 0 | logfile |
✔ | 8RED | 19083 | 2024-02-20 | 2023-12-10 | 3.9 | 4.13 | 3.86 | 3.8 | 0.005 | 0.68 | 0.0 | 0.04 | 19.76 | 0.01 | 2.088 | 10.12 | 0.41 | 6.4 | 93.5 | 0.0 | -0.58 | 0.80 | 0.75 | 1.60 | 3.8 | 0.004 | 0.64 | 0.0 | 0.04 | 19.70 | 0.00 | 1.920 | 11.17 | 3.29 | 6.2 | 93.8 | 0.0 | 0.03 | 1.19 | 0.88 | 0.84 | 1.31 | 28878 | 3617 | 10 | 105 | 3 | 0 | 0 | logfile |
✔ | 8XCT | 38254 | 2025-01-13 | 2023-12-10 | 2.87 | 3.06 | — | 3.0 | 0.009 | 1.09 | 0.0 | 0.06 | 16.21 | 0.01 | 2.278 | 4.37 | 5.00 | 2.2 | 97.8 | 0.0 | 1.25 | 0.45 | 0.88 | 4.06 | 3.0 | 0.003 | 0.53 | 0.0 | 0.04 | 16.43 | 0.00 | 2.474 | 4.22 | 0.88 | 2.9 | 96.9 | 0.2 | 1.65 | 1.73 | 0.45 | 0.90 | 4.16 | 3358 | 417 | 2 | 0 | 1 | 28 | 0 | logfile |
✔ | 8XCT | 38254 | 2024-02-13 | 2023-12-10 | 2.87 | 3.06 | — | 3.0 | 0.009 | 1.09 | 0.0 | 0.06 | 16.21 | 0.01 | 2.278 | 4.37 | 5.00 | 2.2 | 97.8 | 0.0 | 1.25 | 0.45 | 0.88 | 4.06 | 3.0 | 0.004 | 0.54 | 0.0 | 0.04 | 16.84 | 0.00 | 2.175 | 5.27 | 1.76 | 3.6 | 96.1 | 0.2 | 1.37 | 1.56 | 0.43 | 0.89 | 4.05 | 3358 | 417 | 2 | 0 | 1 | 28 | 0 | logfile |
✔ | 8XCT | 38254 | 2025-02-11 | 2023-12-10 | 2.87 | 3.06 | — | 3.0 | 0.009 | 1.09 | 0.0 | 0.06 | 16.21 | 0.01 | 2.278 | 4.37 | 5.00 | 2.2 | 97.8 | 0.0 | 1.25 | 0.45 | 0.88 | 4.06 | 3.0 | 0.003 | 0.53 | 0.0 | 0.04 | 16.43 | 0.00 | 2.474 | 4.22 | 0.88 | 2.9 | 96.9 | 0.2 | 1.65 | 1.73 | 0.45 | 0.90 | 4.16 | 3358 | 417 | 2 | 0 | 1 | 28 | 0 | logfile |
✔ | 8XCT | 38254 | 2025-03-05 | 2023-12-10 | 2.87 | 3.06 | 1.03 | 3.0 | 0.009 | 1.09 | 0.0 | 0.06 | 16.21 | 0.01 | 2.278 | 4.37 | 5.00 | 2.2 | 97.8 | 0.0 | 1.25 | 0.45 | 0.88 | 4.06 | 3.0 | 0.003 | 0.54 | 0.0 | 0.04 | 16.66 | 0.00 | 2.453 | 3.31 | 0.88 | 2.4 | 97.3 | 0.2 | 1.46 | 1.74 | 0.45 | 0.91 | 4.09 | 3358 | 417 | 2 | 0 | 1 | 28 | 0 | logfile |
✔ | 8XCT | 38254 | 2024-06-24 | 2023-12-10 | 2.87 | 3.06 | — | 3.0 | 0.009 | 1.09 | 0.0 | 0.06 | 16.21 | 0.01 | 2.278 | 4.37 | 5.00 | 2.2 | 97.8 | 0.0 | 1.25 | 0.45 | 0.88 | 4.06 | 3.0 | 0.004 | 0.54 | 0.0 | 0.04 | 16.84 | 0.00 | 2.175 | 5.27 | 1.76 | 3.6 | 96.1 | 0.2 | 1.37 | 1.56 | 0.43 | 0.89 | 4.05 | 3358 | 417 | 2 | 0 | 1 | 28 | 0 | logfile |
✔ | 8XCT | 38254 | 2024-07-18 | 2023-12-10 | 2.87 | 3.06 | — | 3.0 | 0.009 | 1.09 | 0.0 | 0.06 | 16.21 | 0.01 | 2.278 | 4.37 | 5.00 | 2.2 | 97.8 | 0.0 | 1.25 | 0.45 | 0.88 | 4.06 | 3.0 | 0.004 | 0.54 | 0.0 | 0.04 | 16.52 | 0.00 | 2.164 | 5.27 | 1.47 | 2.7 | 97.1 | 0.2 | 1.69 | 1.73 | 0.45 | 0.91 | 4.23 | 3358 | 417 | 2 | 0 | 1 | 28 | 0 | logfile |
✔ | 8XCT | 38254 | 2024-08-02 | 2023-12-10 | 2.87 | 3.06 | — | 3.0 | 0.009 | 1.09 | 0.0 | 0.06 | 16.21 | 0.01 | 2.278 | 4.37 | 5.00 | 2.2 | 97.8 | 0.0 | 1.25 | 0.45 | 0.88 | 4.06 | 3.0 | 0.005 | 0.56 | 0.0 | 0.04 | 16.54 | 0.00 | 2.478 | 4.07 | 1.18 | 3.4 | 96.4 | 0.2 | 1.55 | 1.73 | 0.43 | 0.90 | 4.40 | 3358 | 417 | 2 | 0 | 1 | 28 | 0 | logfile |
✔ | 8XCT | 38254 | 2024-09-23 | 2023-12-10 | 2.87 | 3.06 | — | 3.0 | 0.009 | 1.09 | 0.0 | 0.06 | 16.21 | 0.01 | 2.278 | 4.37 | 5.00 | 2.2 | 97.8 | 0.0 | 1.25 | 0.45 | 0.88 | 4.06 | 3.0 | 0.005 | 0.56 | 0.0 | 0.04 | 16.54 | 0.00 | 2.478 | 4.07 | 1.18 | 3.4 | 96.4 | 0.2 | 1.55 | 1.73 | 0.43 | 0.90 | 4.40 | 3358 | 417 | 2 | 0 | 1 | 28 | 0 | logfile |
✔ | 8XCT | 38254 | 2024-11-14 | 2023-12-10 | 2.87 | 3.06 | — | 3.0 | 0.009 | 1.09 | 0.0 | 0.06 | 16.21 | 0.01 | 2.278 | 4.37 | 5.00 | 2.2 | 97.8 | 0.0 | 1.25 | 0.45 | 0.88 | 4.06 | 3.0 | 0.005 | 0.56 | 0.0 | 0.04 | 16.54 | 0.00 | 2.478 | 4.07 | 1.18 | 3.4 | 96.4 | 0.2 | 1.55 | 1.73 | 0.43 | 0.90 | 4.40 | 3358 | 417 | 2 | 0 | 1 | 28 | 0 | logfile |