Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8VZo	43684	2025-01-14	2024-02-12	2.49	2.66	2.50	2.7	0.013	1.82	1.0	0.10	14.97	0.03	2.347	6.25	3.67	4.0	96.0	0.0	-2.36	0.56	0.81	3.92	2.6	0.003	0.57	0.0	0.04	15.16	0.00	2.615	4.69	1.74	2.1	97.9	0.0	2.40	0.51	0.67	0.88	3.65	4796	615	4	0	1	0	0	logfile
✔	8VZo	43684	2025-05-10	2024-02-12	2.49	2.66	2.50	2.7	0.013	1.82	1.0	0.10	14.97	0.03	2.347	6.25	3.67	4.0	96.0	0.0	-2.36	0.56	0.81	3.92	2.6	0.003	0.57	0.0	0.04	15.16	0.00	2.615	4.69	1.74	2.1	97.9	0.0	2.40	0.51	0.67	0.88	3.65	4796	615	4	0	1	0	0	logfile
✔	8VZo	43684	2025-04-27	2024-02-12	2.49	2.66	2.50	2.7	0.013	1.82	1.0	0.10	14.97	0.03	2.347	6.25	3.67	4.0	96.0	0.0	-2.36	0.56	0.81	3.92	2.6	0.003	0.58	0.0	0.04	15.19	0.00	2.609	4.69	2.12	2.0	98.0	0.0	2.24	0.51	0.67	0.88	3.83	4796	615	4	0	1	0	0	logfile
✔	8VZo	43684	2025-03-06	2024-02-12	2.49	2.66	2.50	2.7	0.013	1.82	1.0	0.10	14.97	0.03	2.347	6.25	3.67	4.0	96.0	0.0	-2.36	0.56	0.81	3.92	2.6	0.003	0.58	0.0	0.04	15.19	0.00	2.609	4.69	2.12	2.0	98.0	0.0	2.24	0.51	0.67	0.88	3.83	4796	615	4	0	1	0	0	logfile
✔	8VZo	43684	2024-08-02	2024-02-12	2.49	2.66	2.50	2.7	0.013	1.82	1.0	0.10	14.97	0.03	2.347	6.25	3.67	4.0	96.0	0.0	-2.36	0.56	0.81	3.92	2.6	0.005	0.64	0.0	0.05	15.30	0.01	2.597	5.00	1.54	2.6	97.4	0.0	1.92	0.50	0.67	0.89	4.03	4796	615	4	0	1	0	0	logfile
✔	8VZo	43684	2024-09-23	2024-02-12	2.49	2.66	2.50	2.7	0.013	1.82	1.0	0.10	14.97	0.03	2.347	6.25	3.67	4.0	96.0	0.0	-2.36	0.56	0.81	3.92	2.6	0.005	0.64	0.0	0.05	15.30	0.01	2.597	5.00	1.54	2.6	97.4	0.0	1.92	0.50	0.67	0.89	4.03	4796	615	4	0	1	0	0	logfile
✔	8RZ8	19606	2025-04-30	2024-02-12	3.06	2.38	3.08	3.0	0.007	1.19	0.0	0.08	16.61	0.00	1.729	17.03	2.74	6.1	93.9	0.0	-1.06	0.77	0.77	1.63	2.0	0.004	0.65	0.0	0.04	17.70	0.00	1.810	12.85	3.23	4.1	95.9	0.0	-0.09	0.52	0.75	0.74	1.58	9255	1160	4	0	4	0	0	logfile
✔	8RZ8	19606	2025-05-12	2024-02-12	3.06	2.38	3.08	3.0	0.007	1.19	0.0	0.08	16.61	0.00	1.729	17.03	2.74	6.1	93.9	0.0	-1.06	0.77	0.77	1.63	3.0	0.005	0.68	0.0	0.04	17.70	0.00	1.793	13.21	3.23	4.2	95.8	0.0	-0.22	0.52	0.75	0.74	1.67	9255	1160	4	0	4	0	0	logfile
✔	8RZ8	19606	2024-12-28	2024-02-12	3.06	2.38	3.08	3.0	0.007	1.19	0.0	0.08	16.61	0.00	1.729	17.03	2.74	6.1	93.9	0.0	-1.06	0.77	0.77	1.63	2.0	0.003	0.66	0.0	0.04	17.68	0.00	1.845	12.24	2.64	3.9	96.1	0.0	-0.06	0.53	0.76	0.75	1.62	9255	1160	4	0	4	0	0	logfile
✔	8RZ8	19606	2025-01-16	2024-02-12	3.06	2.38	3.08	3.0	0.007	1.19	0.0	0.08	16.61	0.00	1.729	17.03	2.74	6.1	93.9	0.0	-1.06	0.77	0.77	1.63	3.0	0.005	0.68	0.0	0.04	17.70	0.00	1.793	13.21	3.23	4.2	95.8	0.0	-0.22	0.52	0.75	0.74	1.67	9255	1160	4	0	4	0	0	logfile
✔	8RZ8	19606	2025-02-13	2024-02-12	3.06	2.38	3.08	3.0	0.007	1.19	0.0	0.08	16.61	0.00	1.729	17.03	2.74	6.1	93.9	0.0	-1.06	0.77	0.77	1.63	3.0	0.005	0.68	0.0	0.04	17.70	0.00	1.793	13.21	3.23	4.2	95.8	0.0	-0.22	0.52	0.75	0.74	1.67	9255	1160	4	0	4	0	0	logfile
✔	8RZ8	19606	2025-03-13	2024-02-12	3.06	2.38	3.08	3.0	0.007	1.19	0.0	0.08	16.61	0.00	1.729	17.03	2.74	6.1	93.9	0.0	-1.06	0.77	0.77	1.63	2.0	0.004	0.65	0.0	0.04	17.70	0.00	1.810	12.85	3.23	4.1	95.9	0.0	-0.09	0.52	0.75	0.74	1.58	9255	1160	4	0	4	0	0	logfile
✔	8YB6	39110	2025-05-25	2024-02-11	3.06	3.33	3.22	3.4	0.003	0.63	0.0	0.04	20.08	0.00	2.234	7.16	0.14	8.7	91.3	0.0	-1.49	0.72	0.83	2.45	3.3	0.005	0.61	0.0	0.04	20.07	0.00	2.468	6.34	4.61	9.3	90.7	0.0	-0.60	0.24	0.67	0.84	2.17	27758	3363	13	61	2	0	0	logfile
✘	8YB6	39110	2024-08-09	2024-02-11	3.06	3.33	3.22	3.4	0.003	0.62	0.0	0.04	20.08	0.00	2.234	7.16	0.14	8.7	91.3	0.0	-1.49	0.72	0.83	2.45	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	27758	3363	13	61	2	0	0	logfile
✔	8YB4	39108	2024-11-15	2024-02-11	3.1	3.56	3.21	3.4	0.004	0.62	0.0	0.04	18.65	0.02	2.205	7.05	0.33	4.6	95.4	0.0	0.26	0.68	0.74	1.67	3.4	0.003	0.61	0.0	0.04	18.28	0.00	2.438	4.36	3.31	3.9	96.0	0.1	1.01	0.90	0.69	0.83	1.75	8400	1067	5	0	2	0	0	logfile
✔	8YB4	39108	2024-12-28	2024-02-11	3.1	3.56	3.21	3.4	0.004	0.62	0.0	0.04	18.65	0.02	2.205	7.05	0.33	4.6	95.4	0.0	0.26	0.68	0.74	1.67	3.4	0.003	0.61	0.0	0.04	18.28	0.00	2.438	4.36	3.31	3.9	96.0	0.1	1.01	0.90	0.69	0.83	1.75	8400	1067	5	0	2	0	0	logfile
✔	8YB4	39108	2025-03-12	2024-02-11	3.1	3.56	3.21	3.4	0.004	0.62	0.0	0.04	18.65	0.02	2.205	7.05	0.33	4.6	95.4	0.0	0.26	0.68	0.74	1.67	3.4	0.003	0.57	0.0	0.04	18.28	0.00	2.450	4.42	3.31	3.9	96.0	0.1	1.17	0.91	0.69	0.83	1.67	8400	1067	5	0	2	0	0	logfile
✔	8YB4	39108	2025-01-15	2024-02-11	3.1	3.56	3.21	3.4	0.004	0.62	0.0	0.04	18.65	0.02	2.205	7.05	0.33	4.6	95.4	0.0	0.26	0.68	0.74	1.67	3.4	0.002	0.56	0.0	0.04	18.29	0.00	2.444	4.60	3.31	3.5	96.4	0.1	1.24	0.91	0.69	0.83	1.71	8400	1067	5	0	2	0	0	logfile
✔	8YB4	39108	2025-02-12	2024-02-11	3.1	3.56	3.21	3.4	0.004	0.62	0.0	0.04	18.65	0.02	2.205	7.05	0.33	4.6	95.4	0.0	0.26	0.68	0.74	1.67	3.4	0.002	0.56	0.0	0.04	18.29	0.00	2.444	4.60	3.31	3.5	96.4	0.1	1.24	0.91	0.69	0.83	1.71	8400	1067	5	0	2	0	0	logfile
✔	8YB4	39108	2024-10-10	2024-02-11	3.1	3.56	3.21	3.4	0.004	0.62	0.0	0.04	18.65	0.02	2.205	7.05	0.33	4.6	95.4	0.0	0.26	0.68	0.74	1.67	3.4	0.003	0.61	0.0	0.04	18.28	0.00	2.438	4.36	3.31	3.9	96.0	0.1	1.01	0.90	0.69	0.83	1.75	8400	1067	5	0	2	0	0	logfile

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