Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	8Y8J	39048	2024-12-27	2024-02-06	3.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	5069	608	10	0	18	0	0	logfile
✘	8Y8J	39048	2025-01-14	2024-02-06	3.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	5069	608	10	0	18	0	0	logfile
✘	8Y8J	39048	2024-11-14	2024-02-06	3.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	5069	608	10	0	18	0	0	logfile
✘	8Y8J	39048	2024-09-23	2024-02-06	3.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	5069	608	10	0	18	0	0	logfile
✘	8Y8J	39048	2024-10-09	2024-02-06	3.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	5069	608	10	0	18	0	0	logfile
✔	8Y8i	39047	2025-05-26	2024-02-06	3.58	2.86	3.64	2.0	0.002	0.40	0.0	0.04	7.75	0.00	2.216	6.32	3.10	3.5	96.5	0.0	-2.74	0.63	0.54	0.63	1.8	0.006	0.80	0.0	0.05	12.43	0.01	2.420	14.76	2.78	8.2	91.8	0.0	-1.84	0.76	0.66	0.62	0.64	27728	3567	6	0	6	0	0	logfile
✔	8Y8i	39047	2024-08-10	2024-02-06	3.58	2.86	3.64	2.0	0.002	0.40	0.0	0.04	7.75	0.00	2.216	6.32	3.10	3.5	96.5	0.0	-2.74	0.63	0.54	0.63	1.9	0.006	0.84	2.0	0.05	12.34	0.01	1.927	14.91	2.49	7.1	92.9	0.0	-1.61	0.74	0.66	0.60	0.71	27728	3567	6	0	6	0	0	logfile
✔	8Y8H	39046	2025-05-26	2024-02-06	3.65	2.56	3.74	1.8	0.002	0.43	0.0	0.04	7.61	0.00	2.225	5.50	1.54	4.1	95.9	0.0	-3.71	0.66	0.59	1.29	1.8	0.003	0.65	0.0	0.04	12.05	0.00	2.461	7.62	2.32	5.8	94.2	0.0	-1.73	1.03	0.65	0.57	1.07	27359	3545	6	0	11	0	0	logfile
✘	8Y91	39066	2025-01-16	2024-02-06	3.13	3.47	3.24	3.4	0.004	0.55	0.0	0.04	11.48	0.00	1.938	9.24	5.04	4.4	95.6	0.0	-1.65	0.48	0.65	1.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9072	1130	4	0	6	0	0	logfile
✔	8RXC	19573	2025-05-30	2024-02-06	3.15	3.82	3.32	3.5	0.008	0.86	0.0	0.05	19.21	0.00	1.903	8.52	0.30	4.7	94.8	0.5	-1.13	0.55	0.25	2.79	3.6	0.003	0.72	0.0	0.04	19.12	0.00	1.916	8.21	2.39	4.1	95.8	0.1	0.54	1.04	0.86	0.88	2.35	19206	2376	13	42	10	0	0	logfile
✔	8VXY	43643	2025-01-18	2024-02-06	3.19	3.47	3.32	3.5	0.003	0.81	0.0	0.06	16.14	0.00	2.215	14.40	0.00	4.8	95.2	0.0	-0.15	0.61	0.62	1.03	3.5	0.004	0.69	0.0	0.04	18.62	0.00	2.502	17.03	1.71	4.8	95.2	0.0	-0.92	1.42	0.65	0.67	0.87	12324	1406	5	62	1	0	0	logfile
✔	8VXY	43643	2025-05-14	2024-02-06	3.19	3.47	3.32	3.5	0.003	0.81	0.0	0.06	16.14	0.00	2.215	14.40	0.00	4.8	95.2	0.0	-0.15	0.61	0.62	1.03	3.5	0.004	0.69	0.0	0.04	18.62	0.00	2.502	17.03	1.71	4.8	95.2	0.0	-0.92	1.42	0.65	0.67	0.87	12324	1406	5	62	1	0	0	logfile
✘	8Y8P	39054	2025-05-21	2024-02-06	2.9	3.04	2.80	3.0	0.013	0.62	0.0	0.03	15.89	0.00	0.000	11.08	0.52	6.4	93.6	0.0	-1.29	0.66	0.84	4.23	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	22644	3024	12	0	0	0	0	logfile
✘	8Y8o	39053	2025-05-21	2024-02-06	2.94	3.07	2.87	3.1	0.034	0.59	0.0	0.03	16.73	0.00	0.000	7.80	1.04	2.4	97.6	0.0	0.25	0.69	0.85	4.07	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	22656	3024	12	0	0	0	0	logfile
✘	8Y8Q	39055	2025-05-21	2024-02-06	2.67	2.71	2.59	2.8	0.022	0.66	0.0	0.04	17.47	0.00	0.000	6.83	1.56	5.6	94.4	0.0	-1.01	0.68	0.85	2.91	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	22596	3024	12	0	0	0	0	logfile
✔	8Y8C	39041	2025-05-26	2024-02-06	2.95	3.16	2.99	3.1	0.002	0.40	0.0	0.04	6.86	0.00	2.219	3.81	0.80	2.2	97.8	0.0	-1.59	0.75	0.84	3.94	3.1	0.003	0.60	0.0	0.04	13.02	0.00	2.397	3.33	2.12	3.7	96.3	0.0	-0.35	0.56	0.78	0.90	4.05	27789	3548	6	0	25	0	0	logfile
✔	8Y8C	39041	2024-08-10	2024-02-06	2.95	3.16	3.00	3.2	0.002	0.40	0.0	0.04	6.86	0.00	2.219	3.81	0.80	2.2	97.8	0.0	-1.59	0.75	0.84	3.94	3.1	0.004	0.60	0.0	0.04	13.07	0.00	2.396	3.13	2.28	3.9	96.1	0.0	-0.41	0.56	0.77	0.90	3.96	27789	3548	6	0	25	0	0	logfile
✔	8Y8G	39045	2025-05-26	2024-02-06	3.23	3.55	3.37	3.5	0.002	0.43	0.0	0.04	8.08	0.00	2.236	4.64	1.19	3.4	96.6	0.0	-3.23	0.75	0.83	3.07	3.5	0.003	0.63	0.0	0.04	11.97	0.00	2.421	4.57	1.99	5.7	94.3	0.0	-1.15	0.71	0.78	0.89	3.11	27828	3527	11	0	31	0	0	logfile
✔	8Y8G	39045	2024-08-10	2024-02-06	3.23	3.55	3.37	3.5	0.002	0.43	0.0	0.04	8.08	0.00	2.236	4.64	1.19	3.4	96.6	0.0	-3.23	0.75	0.83	3.07	3.5	0.004	0.60	0.0	0.04	11.95	0.00	2.422	4.66	2.28	5.7	94.2	0.0	-0.99	0.69	0.78	0.89	3.02	27828	3527	11	0	31	0	0	logfile
✔	8Y86	39035	2024-12-28	2024-02-06	2.75	3.36	2.84	3.3	0.003	0.54	0.0	0.04	15.01	0.00	2.290	2.24	1.25	1.9	98.1	0.0	1.76	0.56	0.81	2.34	3.3	0.004	0.55	0.0	0.04	15.81	0.00	2.594	1.81	2.05	2.0	98.0	0.0	2.00	0.19	0.54	0.79	2.40	8060	1028	4	0	2	0	0	logfile

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