Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8Y93	39068	2025-02-13	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.68	0.0	0.04	15.62	0.00	2.298	8.30	3.36	3.3	96.7	0.0	1.02	1.08	0.62	0.83	2.14	9055	1130	3	0	3	0	0	logfile
✔	8Y93	39068	2024-09-24	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.66	0.0	0.04	15.49	0.00	2.300	8.02	2.84	3.2	96.8	0.0	1.18	1.07	0.61	0.82	1.76	9055	1130	3	0	3	0	0	logfile
✔	8Y93	39068	2024-10-11	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.66	0.0	0.04	15.49	0.00	2.300	8.02	2.84	3.2	96.8	0.0	1.18	1.07	0.61	0.82	1.76	9055	1130	3	0	3	0	0	logfile
✔	8Y93	39068	2024-11-15	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.66	0.0	0.04	15.49	0.00	2.300	8.02	2.84	3.2	96.8	0.0	1.18	1.07	0.61	0.82	1.76	9055	1130	3	0	3	0	0	logfile
✔	8Y93	39068	2025-04-29	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.70	0.0	0.04	15.71	0.00	2.263	8.35	3.05	3.6	96.4	0.0	1.05	0.80	0.61	0.83	2.00	9055	1130	3	0	3	0	0	logfile
✔	8Y93	39068	2024-12-28	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.66	0.0	0.04	15.49	0.00	2.300	8.02	2.84	3.2	96.8	0.0	1.18	1.07	0.61	0.82	1.76	9055	1130	3	0	3	0	0	logfile
✔	8Y93	39068	2025-01-16	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.68	0.0	0.04	15.62	0.00	2.298	8.30	3.36	3.3	96.7	0.0	1.02	1.08	0.62	0.83	2.14	9055	1130	3	0	3	0	0	logfile
✔	8Y9F	39076	2025-01-20	2024-02-06	3.3	4.20	3.35	3.7	0.004	0.67	0.0	0.04	15.17	0.00	2.244	9.51	0.18	3.8	96.2	0.0	0.70	0.74	0.82	2.88	3.7	0.003	0.58	0.0	0.04	15.62	0.00	2.431	7.70	0.90	3.2	96.8	0.0	1.00	0.39	0.74	0.86	2.38	15505	1968	10	0	4	0	0	logfile
✔	8Y9J	39081	2025-05-13	2024-02-06	4.6	4.84	4.61	4.7	0.012	2.02	19.0	0.12	16.84	0.02	2.310	2.29	2.23	7.4	90.6	2.0	-2.49	0.43	0.72	—	4.7	0.004	0.94	0.0	0.05	15.24	0.01	2.309	17.59	0.00	8.5	91.1	0.3	-1.39	1.18	0.46	0.74	—	9770	1205	5	12	0	0	0	logfile
✔	8Y9F	39076	2025-05-17	2024-02-06	3.3	4.20	3.34	3.7	0.004	0.67	0.0	0.04	15.17	0.00	2.244	9.51	0.18	3.8	96.2	0.0	0.70	0.74	0.82	2.88	3.7	0.003	0.58	0.0	0.04	15.62	0.00	2.431	7.70	0.90	3.2	96.8	0.0	1.00	0.39	0.74	0.86	2.38	15505	1968	10	0	4	0	0	logfile
✔	8Y9F	39076	2024-11-18	2024-02-06	3.3	4.20	3.35	3.7	0.004	0.67	0.0	0.04	15.17	0.00	2.244	9.51	0.18	3.8	96.2	0.0	0.70	0.74	0.82	2.88	3.6	0.003	0.60	0.0	0.04	15.60	0.00	2.447	7.83	0.60	3.3	96.7	0.0	0.98	0.41	0.74	0.86	2.28	15505	1968	10	0	4	0	0	logfile
✔	8Y9F	39076	2024-12-31	2024-02-06	3.3	4.20	3.35	3.7	0.004	0.67	0.0	0.04	15.17	0.00	2.244	9.51	0.18	3.8	96.2	0.0	0.70	0.74	0.82	2.88	3.6	0.003	0.60	0.0	0.04	15.60	0.00	2.447	7.83	0.60	3.3	96.7	0.0	0.98	0.41	0.74	0.86	2.28	15505	1968	10	0	4	0	0	logfile
✔	8Y9J	39081	2025-04-30	2024-02-06	4.6	4.84	4.61	4.7	0.012	2.02	19.0	0.12	16.84	0.02	2.310	2.29	2.23	7.4	90.6	2.0	-2.49	0.43	0.72	—	4.7	0.004	0.93	0.0	0.05	15.16	0.01	2.294	17.64	0.00	8.9	90.7	0.3	-1.32	1.17	0.46	0.74	—	9770	1205	5	12	0	0	0	logfile
✔	8Y9J	39081	2025-02-14	2024-02-06	4.6	4.84	4.60	4.7	0.012	2.02	19.0	0.12	16.84	0.02	2.310	2.29	2.23	7.4	90.6	2.0	-2.49	0.43	0.72	—	4.7	0.004	0.94	0.0	0.05	15.24	0.01	2.309	17.59	0.00	8.5	91.1	0.3	-1.39	1.18	0.46	0.74	—	9770	1205	5	12	0	0	0	logfile
✔	8Y9B	39072	2024-09-26	2024-02-06	3.2	3.27	3.08	3.3	0.004	0.54	0.0	0.05	13.74	0.00	2.077	5.44	0.00	3.3	96.7	0.0	0.47	0.71	0.82	3.00	3.3	0.002	0.46	0.0	0.04	15.62	0.00	2.135	3.70	0.99	2.7	97.2	0.1	1.40	0.38	0.72	0.85	2.57	13380	1672	3	0	1	0	0	logfile
✔	8Y9B	39072	2025-05-15	2024-02-06	3.2	3.27	3.08	3.3	0.004	0.54	0.0	0.05	13.74	0.00	2.077	5.44	0.00	3.3	96.7	0.0	0.47	0.71	0.82	3.00	3.3	0.002	0.47	0.0	0.04	15.73	0.00	2.131	4.04	1.19	3.0	97.0	0.1	1.24	0.38	0.75	0.86	2.68	13380	1672	3	0	1	0	0	logfile
✔	8Y9B	39072	2025-01-19	2024-02-06	3.2	3.27	3.08	3.3	0.004	0.54	0.0	0.05	13.74	0.00	2.077	5.44	0.00	3.3	96.7	0.0	0.47	0.71	0.82	3.00	3.3	0.003	0.50	0.0	0.04	15.75	0.00	2.095	3.78	1.52	3.1	96.9	0.0	0.97	0.37	0.76	0.87	2.90	13380	1672	3	0	1	0	0	logfile
✔	8Y9C	39073	2025-05-15	2024-02-06	3.0	3.24	3.07	3.2	0.003	0.49	0.0	0.04	14.35	0.00	2.211	7.37	0.46	3.7	96.3	0.0	1.00	0.71	0.78	2.73	3.2	0.003	0.58	0.0	0.04	16.27	0.00	2.234	5.68	1.38	3.0	97.0	0.0	1.14	0.65	0.72	0.82	2.67	13400	1674	3	0	1	0	0	logfile
✔	8Y8K	39050	2024-12-28	2024-02-06	2.89	3.09	2.92	3.2	0.003	0.54	0.0	0.04	16.02	0.01	2.248	3.63	2.28	2.5	97.5	0.0	1.68	0.61	0.80	1.21	3.1	0.004	0.54	0.0	0.04	16.48	0.01	2.612	3.08	2.62	2.5	97.5	0.0	1.91	0.31	0.57	0.79	1.38	8052	1028	2	0	0	0	0	logfile
✔	8Y88	39037	2025-05-29	2024-02-06	3.03	2.43	3.03	2.2	0.002	0.42	0.0	0.04	7.75	0.00	2.210	4.18	1.72	3.8	96.2	0.0	-3.28	0.75	0.76	3.28	2.1	0.004	0.77	3.0	0.05	12.45	0.00	2.427	5.20	2.79	6.1	93.9	0.0	-0.89	0.53	0.77	0.82	2.86	31257	4031	12	0	27	0	0	logfile

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