Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8Y8E	39043	2025-05-25	2024-02-06	3.62	2.58	3.68	1.8	0.002	0.43	0.0	0.04	8.47	0.00	2.211	6.06	2.45	5.7	94.3	0.0	-3.40	0.67	0.60	1.08	1.7	0.003	0.67	0.0	0.04	12.40	0.00	2.478	8.69	2.70	9.6	90.4	0.0	-2.23	1.01	0.69	0.63	0.93	26640	3538	6	0	16	0	0	logfile
✔	8Y8E	39043	2024-08-09	2024-02-06	3.62	2.58	3.68	1.8	0.002	0.43	0.0	0.04	8.47	0.00	2.211	6.06	2.45	5.7	94.3	0.0	-3.40	0.67	0.60	1.08	1.7	0.003	0.68	0.0	0.04	12.30	0.00	2.513	8.81	3.33	10.2	89.8	0.0	-2.26	1.00	0.69	0.64	0.84	26640	3538	6	0	16	0	0	logfile
✔	8Y8K	39050	2025-01-15	2024-02-06	2.89	3.09	2.92	3.2	0.003	0.54	0.0	0.04	16.02	0.01	2.248	3.63	2.28	2.5	97.5	0.0	1.68	0.61	0.80	1.21	3.2	0.003	0.49	0.0	0.04	16.56	0.01	2.614	2.78	2.85	2.4	97.6	0.0	2.06	0.26	0.57	0.79	1.24	8052	1028	2	0	0	0	0	logfile
✔	8Y8K	39050	2025-02-12	2024-02-06	2.89	3.09	2.92	3.2	0.003	0.54	0.0	0.04	16.02	0.01	2.248	3.63	2.28	2.5	97.5	0.0	1.68	0.61	0.80	1.21	3.2	0.003	0.49	0.0	0.04	16.56	0.01	2.614	2.78	2.85	2.4	97.6	0.0	2.06	0.26	0.57	0.79	1.24	8052	1028	2	0	0	0	0	logfile
✔	8Y8K	39050	2025-03-12	2024-02-06	2.89	3.09	2.85	3.2	0.003	0.54	0.0	0.04	16.02	0.01	2.248	3.63	2.28	2.5	97.5	0.0	1.68	0.61	0.80	1.21	3.2	0.003	0.50	0.0	0.04	16.50	0.01	2.614	3.21	3.53	2.5	97.5	0.0	2.11	0.26	0.56	0.78	1.29	8052	1028	2	0	0	0	0	logfile
✔	8Y8K	39050	2025-04-28	2024-02-06	2.89	3.09	2.85	3.2	0.003	0.54	0.0	0.04	16.02	0.01	2.248	3.63	2.28	2.5	97.5	0.0	1.68	0.61	0.80	1.21	3.2	0.003	0.50	0.0	0.04	16.50	0.01	2.614	3.21	3.53	2.5	97.5	0.0	2.11	0.26	0.56	0.78	1.29	8052	1028	2	0	0	0	0	logfile
✔	8Y8K	39050	2025-05-11	2024-02-06	2.89	3.09	2.85	3.2	0.003	0.54	0.0	0.04	16.02	0.01	2.248	3.63	2.28	2.5	97.5	0.0	1.68	0.61	0.80	1.21	3.2	0.003	0.49	0.0	0.04	16.56	0.01	2.614	2.78	2.85	2.4	97.6	0.0	2.06	0.26	0.57	0.79	1.24	8052	1028	2	0	0	0	0	logfile
✔	8Y8K	39050	2024-08-03	2024-02-06	2.89	3.09	2.92	3.2	0.003	0.54	0.0	0.04	16.02	0.01	2.248	3.63	2.28	2.5	97.5	0.0	1.68	0.61	0.80	1.21	3.1	0.004	0.54	0.0	0.04	16.48	0.01	2.612	3.08	2.62	2.5	97.5	0.0	1.91	0.31	0.57	0.79	1.38	8052	1028	2	0	0	0	0	logfile
✔	8Y8K	39050	2024-09-24	2024-02-06	2.89	3.09	2.92	3.2	0.003	0.54	0.0	0.04	16.02	0.01	2.248	3.63	2.28	2.5	97.5	0.0	1.68	0.61	0.80	1.21	3.1	0.004	0.54	0.0	0.04	16.48	0.01	2.612	3.08	2.62	2.5	97.5	0.0	1.91	0.31	0.57	0.79	1.38	8052	1028	2	0	0	0	0	logfile
✔	8Y8K	39050	2024-10-10	2024-02-06	2.89	3.09	2.92	3.2	0.003	0.54	0.0	0.04	16.02	0.01	2.248	3.63	2.28	2.5	97.5	0.0	1.68	0.61	0.80	1.21	3.1	0.004	0.54	0.0	0.04	16.48	0.01	2.612	3.08	2.62	2.5	97.5	0.0	1.91	0.31	0.57	0.79	1.38	8052	1028	2	0	0	0	0	logfile
✔	8Y8A	39039	2025-05-30	2024-02-06	3.19	2.47	3.23	2.2	0.002	0.43	0.0	0.04	7.89	0.00	2.209	3.84	1.45	3.5	96.5	0.0	-2.29	0.73	0.73	2.75	2.1	0.004	0.73	1.0	0.05	12.07	0.00	2.186	5.63	2.50	4.8	95.2	0.0	-0.81	0.99	0.76	0.80	2.72	33387	4284	22	0	38	0	0	logfile
✔	8Y8K	39050	2024-12-28	2024-02-06	2.89	3.09	2.92	3.2	0.003	0.54	0.0	0.04	16.02	0.01	2.248	3.63	2.28	2.5	97.5	0.0	1.68	0.61	0.80	1.21	3.1	0.004	0.54	0.0	0.04	16.48	0.01	2.612	3.08	2.62	2.5	97.5	0.0	1.91	0.31	0.57	0.79	1.38	8052	1028	2	0	0	0	0	logfile
✘	8Y8X	39063	2025-05-21	2024-02-06	2.26	2.31	2.19	2.3	0.018	0.63	0.0	0.04	14.31	0.00	0.000	6.97	1.08	1.6	98.4	0.0	1.31	0.74	0.87	4.53	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	22452	3012	12	0	0	0	0	logfile
✘	8Y8J	39048	2025-04-27	2024-02-06	3.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	5069	608	10	0	18	0	0	logfile
✘	8Y8J	39048	2025-05-10	2024-02-06	3.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	5069	608	10	0	18	0	0	logfile
✘	8Y8J	39048	2025-03-06	2024-02-06	3.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	5069	608	10	0	18	0	0	logfile
✘	8Y8o	39053	2025-05-21	2024-02-06	2.94	3.07	2.87	3.1	0.034	0.59	0.0	0.03	16.73	0.00	0.000	7.80	1.04	2.4	97.6	0.0	0.25	0.69	0.85	4.07	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	22656	3024	12	0	0	0	0	logfile
✘	8Y8J	39048	2024-12-27	2024-02-06	3.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	5069	608	10	0	18	0	0	logfile
✔	8Y87	39036	2025-05-27	2024-02-06	3.26	2.50	3.33	2.2	0.002	0.43	0.0	0.04	7.82	0.00	2.244	4.09	1.77	3.2	96.8	0.0	-2.35	0.75	0.75	3.02	2.2	0.005	0.68	0.0	0.05	12.73	0.00	2.448	5.70	2.93	5.3	94.7	0.0	-0.90	1.01	0.77	0.82	2.96	29531	3778	10	0	29	0	0	logfile
✔	8Y87	39036	2024-08-10	2024-02-06	3.26	2.50	3.33	2.2	0.002	0.43	0.0	0.04	7.82	0.00	2.244	4.09	1.77	3.2	96.8	0.0	-2.35	0.75	0.75	3.02	2.2	0.004	0.61	0.0	0.05	12.53	0.00	2.139	5.34	2.84	4.9	95.1	0.0	-0.74	0.60	0.77	0.82	2.91	29531	3778	10	0	29	0	0	logfile

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