Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	8Y8R	39056	2025-05-23	2024-02-06	3.39	3.60	3.30	3.6	0.025	0.66	0.0	0.04	15.54	0.00	0.000	11.10	1.94	3.8	95.8	0.4	-1.54	0.73	0.87	3.73	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	24528	3204	24	0	12	0	0	logfile
✔	8Y9J	39081	2025-02-14	2024-02-06	4.6	4.84	4.60	4.7	0.012	2.02	19.0	0.12	16.84	0.02	2.310	2.29	2.23	7.4	90.6	2.0	-2.49	0.43	0.72	—	4.7	0.004	0.94	0.0	0.05	15.24	0.01	2.309	17.59	0.00	8.5	91.1	0.3	-1.39	1.18	0.46	0.74	—	9770	1205	5	12	0	0	0	logfile
✔	8Y8S	39057	2025-05-11	2024-02-06	3.03	3.17	2.93	3.2	0.002	0.42	0.0	0.04	16.23	0.00	2.265	4.62	2.85	3.8	96.2	0.0	-0.75	0.71	0.86	3.15	3.2	0.004	0.55	0.0	0.04	16.07	0.00	2.466	3.82	4.28	4.9	95.1	0.0	1.25	0.26	0.70	0.86	2.85	7577	1011	4	0	0	0	0	logfile
✔	8Y93	39068	2024-08-03	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.66	0.0	0.04	15.49	0.00	2.300	8.02	2.84	3.2	96.8	0.0	1.18	1.07	0.61	0.82	1.76	9055	1130	3	0	3	0	0	logfile
✔	8Y93	39068	2024-12-28	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.66	0.0	0.04	15.49	0.00	2.300	8.02	2.84	3.2	96.8	0.0	1.18	1.07	0.61	0.82	1.76	9055	1130	3	0	3	0	0	logfile
✔	8Y93	39068	2024-11-15	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.66	0.0	0.04	15.49	0.00	2.300	8.02	2.84	3.2	96.8	0.0	1.18	1.07	0.61	0.82	1.76	9055	1130	3	0	3	0	0	logfile
✔	8Y93	39068	2024-10-11	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.66	0.0	0.04	15.49	0.00	2.300	8.02	2.84	3.2	96.8	0.0	1.18	1.07	0.61	0.82	1.76	9055	1130	3	0	3	0	0	logfile
✔	8Y93	39068	2024-09-24	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.66	0.0	0.04	15.49	0.00	2.300	8.02	2.84	3.2	96.8	0.0	1.18	1.07	0.61	0.82	1.76	9055	1130	3	0	3	0	0	logfile
✔	8Y93	39068	2025-05-12	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.68	0.0	0.04	15.62	0.00	2.298	8.30	3.36	3.3	96.7	0.0	1.02	1.08	0.62	0.83	2.14	9055	1130	3	0	3	0	0	logfile
✔	8Y93	39068	2025-04-29	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.70	0.0	0.04	15.71	0.00	2.263	8.35	3.05	3.6	96.4	0.0	1.05	0.80	0.61	0.83	2.00	9055	1130	3	0	3	0	0	logfile
✔	8Y93	39068	2025-03-13	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.70	0.0	0.04	15.71	0.00	2.263	8.35	3.05	3.6	96.4	0.0	1.05	0.80	0.61	0.83	2.00	9055	1130	3	0	3	0	0	logfile
✔	8Y93	39068	2025-02-13	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.68	0.0	0.04	15.62	0.00	2.298	8.30	3.36	3.3	96.7	0.0	1.02	1.08	0.62	0.83	2.14	9055	1130	3	0	3	0	0	logfile
✔	8Y93	39068	2025-01-16	2024-02-06	3.0	3.45	3.17	3.4	0.003	0.60	0.0	0.04	11.79	0.00	2.127	7.36	5.15	2.2	97.8	0.0	-1.85	0.51	0.68	2.29	3.4	0.003	0.68	0.0	0.04	15.62	0.00	2.298	8.30	3.36	3.3	96.7	0.0	1.02	1.08	0.62	0.83	2.14	9055	1130	3	0	3	0	0	logfile
✔	8Y9C	39073	2025-01-19	2024-02-06	3.0	3.24	3.07	3.2	0.003	0.49	0.0	0.04	14.35	0.00	2.211	7.37	0.46	3.7	96.3	0.0	1.00	0.71	0.78	2.73	3.2	0.004	0.58	0.0	0.05	16.36	0.00	2.278	5.83	1.51	3.3	96.7	0.0	0.96	0.66	0.73	0.82	2.75	13400	1674	3	0	1	0	0	logfile
✔	8Y8A	39039	2025-05-30	2024-02-06	3.19	2.47	3.23	2.2	0.002	0.43	0.0	0.04	7.89	0.00	2.209	3.84	1.45	3.5	96.5	0.0	-2.29	0.73	0.73	2.75	2.1	0.004	0.73	1.0	0.05	12.07	0.00	2.186	5.63	2.50	4.8	95.2	0.0	-0.81	0.99	0.76	0.80	2.72	33387	4284	22	0	38	0	0	logfile
✘	8Y8J	39048	2024-12-27	2024-02-06	3.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	5069	608	10	0	18	0	0	logfile
✔	8Y89	39038	2025-05-28	2024-02-06	3.32	2.55	3.35	2.2	0.002	0.44	0.0	0.04	7.94	0.00	2.210	4.81	1.78	4.4	95.6	0.0	-2.29	0.73	0.73	2.36	2.2	0.006	0.75	0.0	0.05	12.15	0.00	2.374	5.94	2.69	6.4	93.6	0.0	-1.10	0.96	0.76	0.80	2.43	30645	3956	19	0	36	0	0	logfile
✘	8Y8J	39048	2025-01-14	2024-02-06	3.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	5069	608	10	0	18	0	0	logfile
✘	8Y8J	39048	2025-02-11	2024-02-06	3.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	5069	608	10	0	18	0	0	logfile
✘	8Y8J	39048	2025-03-06	2024-02-06	3.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	5069	608	10	0	18	0	0	logfile

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