Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8V2B	42904	2025-01-18	2023-11-22	3.67	4.07	3.74	3.9	0.003	0.48	0.0	0.04	21.99	0.00	2.223	4.13	0.00	2.5	97.5	0.0	-2.26	0.79	0.76	1.50	3.8	0.003	0.65	0.0	0.05	14.77	0.00	2.359	5.99	1.51	3.5	96.5	0.0	-0.53	0.73	0.80	0.79	1.40	12049	1455	16	0	29	0	0	logfile
✘	8V2B	42904	2024-12-30	2023-11-22	3.67	4.07	3.74	3.9	0.003	0.48	0.0	0.04	21.99	0.00	2.223	4.13	0.00	2.5	97.5	0.0	-2.26	0.79	0.76	1.50	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	12049	1455	16	0	29	0	0	logfile
✔	8V2J	42916	2024-12-30	2023-11-22	2.9	3.13	2.85	3.1	0.006	0.95	0.0	0.05	16.66	0.01	1.970	2.78	0.42	3.0	97.0	0.0	0.06	0.58	0.72	3.19	3.1	0.004	0.62	0.0	0.04	18.82	0.00	2.020	7.87	3.46	2.6	97.4	0.0	0.42	0.70	0.71	0.84	2.95	13580	1732	8	2	4	0	0	logfile
✔	8V2J	42916	2025-01-19	2023-11-22	2.9	3.13	2.85	3.1	0.006	0.95	0.0	0.05	16.66	0.01	1.970	2.78	0.42	3.0	97.0	0.0	0.06	0.58	0.72	3.19	3.1	0.003	0.62	0.0	0.04	18.92	0.00	2.029	7.71	3.32	2.6	97.4	0.0	0.55	0.73	0.71	0.84	2.93	13580	1732	8	2	4	0	0	logfile
✘	8V26	42899	2024-10-12	2023-11-21	3.33	3.60	3.33	3.4	0.004	0.60	0.0	0.04	27.21	0.00	2.255	7.19	0.28	1.9	98.1	0.0	2.29	0.89	0.89	1.12	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	12689	849	11	290	0	0	0	logfile
✔	8V26	42899	2025-01-18	2023-11-21	3.33	3.60	3.33	3.4	0.004	0.60	0.0	0.04	27.21	0.00	2.255	7.19	0.28	1.9	98.1	0.0	2.29	0.89	0.89	1.12	3.4	0.003	0.56	0.0	0.03	27.40	0.00	2.462	4.94	2.81	2.6	97.4	0.0	2.69	0.24	0.89	0.89	1.29	12689	849	11	290	0	0	0	logfile
✔	8V26	42899	2024-11-17	2023-11-21	3.33	3.60	3.33	3.4	0.004	0.60	0.0	0.04	27.21	0.00	2.255	7.19	0.28	1.9	98.1	0.0	2.29	0.89	0.89	1.12	3.4	0.004	0.55	0.0	0.03	27.37	0.00	2.437	5.29	1.96	2.2	97.8	0.0	2.94	0.27	0.89	0.89	1.28	12689	849	11	290	0	0	0	logfile
✔	8V26	42899	2024-09-26	2023-11-21	3.33	3.60	3.33	3.4	0.004	0.60	0.0	0.04	27.21	0.00	2.255	7.19	0.28	1.9	98.1	0.0	2.29	0.89	0.89	1.12	3.4	0.004	0.55	0.0	0.03	27.37	0.00	2.437	5.29	1.96	2.2	97.8	0.0	2.94	0.27	0.89	0.89	1.28	12689	849	11	290	0	0	0	logfile
✔	8V26	42899	2024-12-30	2023-11-21	3.33	3.60	3.33	3.4	0.004	0.60	0.0	0.04	27.21	0.00	2.255	7.19	0.28	1.9	98.1	0.0	2.29	0.89	0.89	1.12	3.4	0.004	0.55	0.0	0.03	27.37	0.00	2.437	5.29	1.96	2.2	97.8	0.0	2.94	0.27	0.89	0.89	1.28	12689	849	11	290	0	0	0	logfile
✔	8V1Y	42892	2025-01-16	2023-11-21	2.7	2.29	—	1.9	0.003	0.52	0.0	0.04	12.81	0.00	2.268	5.27	0.00	1.8	98.2	0.0	1.13	0.79	0.85	3.37	1.9	0.003	0.66	0.0	0.04	16.50	0.01	2.344	8.56	2.11	2.1	97.9	0.0	0.93	0.56	0.77	0.81	3.24	8918	1137	6	0	2	0	0	logfile
✔	8V1Y	42892	2024-12-28	2023-11-21	2.7	2.29	—	1.9	0.003	0.52	0.0	0.04	12.81	0.00	2.268	5.27	0.00	1.8	98.2	0.0	1.13	0.79	0.85	3.37	1.9	0.003	0.66	0.0	0.04	16.42	0.01	2.332	8.79	1.69	1.8	98.2	0.0	0.90	0.56	0.77	0.81	3.40	8918	1137	6	0	2	0	0	logfile
✔	8V1Y	42892	2025-03-13	2023-11-21	2.7	2.29	—	1.9	0.003	0.52	0.0	0.04	12.81	0.00	2.268	5.27	0.00	1.8	98.2	0.0	1.13	0.79	0.85	3.37	1.9	0.004	0.67	0.0	0.05	16.49	0.01	2.312	8.79	1.59	2.3	97.7	0.0	0.84	0.57	0.77	0.81	3.31	8918	1137	6	0	2	0	0	logfile
✔	8V1Y	42892	2025-02-13	2023-11-21	2.7	2.29	—	1.9	0.003	0.52	0.0	0.04	12.81	0.00	2.268	5.27	0.00	1.8	98.2	0.0	1.13	0.79	0.85	3.37	1.9	0.003	0.66	0.0	0.04	16.50	0.01	2.344	8.56	2.11	2.1	97.9	0.0	0.93	0.56	0.77	0.81	3.24	8918	1137	6	0	2	0	0	logfile
✘	8V1R	42888	2024-11-16	2023-11-21	2.9	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	11864	1355	5	56	6	3	0	logfile
✘	8V1R	42888	2024-10-12	2023-11-21	2.9	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	11864	1355	5	56	6	3	0	logfile
✔	8V1S	42889	2024-09-26	2023-11-21	3.26	3.30	3.25	3.2	0.018	1.64	1.0	0.08	22.66	0.01	1.841	11.72	0.18	0.3	99.6	0.1	-4.48	0.70	0.70	2.44	3.2	0.004	0.79	0.0	0.05	21.98	0.01	2.045	15.37	4.08	6.6	93.4	0.0	-1.43	1.29	0.69	0.68	1.67	11889	1360	5	59	1	0	0	logfile
✔	8V1S	42889	2025-01-18	2023-11-21	3.26	3.30	3.25	3.2	0.018	1.64	1.0	0.08	22.66	0.01	1.841	11.72	0.18	0.3	99.6	0.1	-4.48	0.70	0.70	2.44	3.2	0.004	0.79	0.0	0.05	21.94	0.01	2.039	15.07	3.46	6.2	93.8	0.0	-1.33	1.29	0.71	0.71	1.80	11889	1360	5	59	1	0	0	logfile
✘	8V1R	42888	2025-01-18	2023-11-21	2.9	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	11864	1355	5	56	6	3	0	logfile
✘	8V1R	42888	2024-09-26	2023-11-21	2.9	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	11864	1355	5	56	6	3	0	logfile
✔	8V1S	42889	2024-10-12	2023-11-21	3.26	3.30	3.25	3.2	0.018	1.64	1.0	0.08	22.66	0.01	1.841	11.72	0.18	0.3	99.6	0.1	-4.48	0.70	0.70	2.44	3.2	0.004	0.79	0.0	0.05	21.98	0.01	2.045	15.37	4.08	6.6	93.4	0.0	-1.43	1.29	0.69	0.68	1.67	11889	1360	5	59	1	0	0	logfile

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