Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8X5X	38074	2024-02-13	2023-11-20	3.5	3.67	4.06	3.8	0.004	0.77	0.0	0.04	14.15	0.00	2.094	14.97	0.43	5.3	94.7	0.0	1.03	0.42	0.53	1.42	3.8	0.003	0.76	0.0	0.04	17.57	0.00	2.257	12.40	4.31	4.9	95.1	0.0	1.16	0.80	0.44	0.57	0.33	2105	256	1	0	0	0	0	logfile
✘	8X64	38079	2024-09-23	2023-11-20	3.4	4.16	3.79	4.1	0.006	0.79	1.0	0.05	14.11	0.01	2.290	13.75	0.42	7.5	92.5	0.0	-0.76	0.45	0.61	2.20	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	2189	263	2	0	1	0	0	logfile
✔	8X64	38079	2025-01-13	2023-11-20	3.4	4.16	3.79	4.1	0.006	0.79	1.0	0.05	14.11	0.01	2.290	13.75	0.42	7.5	92.5	0.0	-0.76	0.45	0.61	2.20	4.1	0.003	0.69	0.0	0.04	17.26	0.00	2.638	10.82	4.18	5.5	94.5	0.0	0.18	1.14	0.37	0.57	1.59	2189	263	2	0	1	0	0	logfile
✔	8X5X	38074	2025-01-13	2023-11-20	3.5	3.67	4.06	3.8	0.004	0.77	0.0	0.04	14.15	0.00	2.094	14.97	0.43	5.3	94.7	0.0	1.03	0.42	0.53	1.42	3.8	0.003	0.75	0.0	0.04	17.43	0.00	2.642	10.53	4.74	4.1	95.9	0.0	1.19	0.80	0.44	0.56	1.05	2105	256	1	0	0	0	0	logfile
✔	8X63	38078	2024-11-13	2023-11-20	3.2	4.09	3.72	4.5	0.006	0.77	1.0	0.05	15.29	0.01	2.411	9.43	0.81	8.0	92.0	0.0	-0.11	0.13	0.13	0.69	4.1	0.003	0.75	0.0	0.04	16.99	0.01	2.632	7.24	3.25	8.3	91.7	0.0	0.37	1.30	0.29	0.47	1.06	2252	270	2	0	1	0	0	logfile
✔	8X5Y	38075	2024-09-23	2023-11-20	3.0	3.88	3.52	3.9	0.013	0.90	0.0	0.05	14.80	0.01	2.346	8.21	0.40	7.5	92.5	0.0	-0.78	0.38	0.58	2.00	3.9	0.004	0.80	0.0	0.04	16.86	0.01	2.588	9.07	2.81	6.7	93.3	0.0	-0.34	0.31	0.33	0.54	1.31	2292	274	2	0	1	0	0	logfile
✔	8X5Y	38075	2024-08-02	2023-11-20	3.0	3.88	3.52	3.9	0.013	0.90	0.0	0.05	14.80	0.01	2.346	8.21	0.40	7.5	92.5	0.0	-0.78	0.38	0.58	2.00	3.9	0.004	0.80	0.0	0.04	16.86	0.01	2.588	9.07	2.81	6.7	93.3	0.0	-0.34	0.31	0.33	0.54	1.31	2292	274	2	0	1	0	0	logfile
✔	8X5Y	38075	2024-07-18	2023-11-20	3.0	3.88	3.52	3.9	0.013	0.90	0.0	0.05	14.80	0.01	2.346	8.21	0.40	7.5	92.5	0.0	-0.78	0.38	0.58	2.00	3.9	0.005	0.79	0.0	0.04	17.13	0.00	2.177	9.94	3.21	7.8	92.2	0.0	-0.11	0.31	0.32	0.53	1.42	2292	274	2	0	1	0	0	logfile
✔	8X5Y	38075	2024-06-24	2023-11-20	3.0	3.88	3.52	3.9	0.013	0.90	0.0	0.05	14.80	0.01	2.346	8.21	0.40	7.5	92.5	0.0	-0.78	0.38	0.58	2.00	3.9	0.005	0.79	0.0	0.04	17.13	0.00	2.177	9.94	2.81	7.8	92.2	0.0	-0.11	0.31	0.32	0.53	1.42	2292	274	2	0	1	0	0	logfile
✔	8X5Y	38075	2025-03-05	2023-11-20	3.0	3.88	3.52	3.9	0.013	0.90	0.0	0.05	14.80	0.01	2.346	8.21	0.40	7.5	92.5	0.0	-0.78	0.38	0.58	2.00	3.9	0.003	0.77	0.0	0.04	17.21	0.01	2.603	7.78	2.41	7.1	92.9	0.0	-0.27	0.31	0.33	0.53	1.28	2292	274	2	0	1	0	0	logfile
✔	8X5Y	38075	2024-12-27	2023-11-20	3.0	3.88	3.52	3.9	0.013	0.90	0.0	0.05	14.80	0.01	2.346	8.21	0.40	7.5	92.5	0.0	-0.78	0.38	0.58	2.00	3.9	0.004	0.80	0.0	0.04	16.86	0.01	2.588	9.07	2.81	6.7	93.3	0.0	-0.34	0.31	0.33	0.54	1.31	2292	274	2	0	1	0	0	logfile
✔	8X5Y	38075	2024-11-13	2023-11-20	3.0	3.88	3.52	3.9	0.013	0.90	0.0	0.05	14.80	0.01	2.346	8.21	0.40	7.5	92.5	0.0	-0.78	0.38	0.58	2.00	3.9	0.004	0.80	0.0	0.04	16.86	0.01	2.588	9.07	2.81	6.7	93.3	0.0	-0.34	0.31	0.33	0.54	1.31	2292	274	2	0	1	0	0	logfile
✔	8X5Y	38075	2025-01-13	2023-11-20	3.0	3.88	3.52	3.9	0.013	0.90	0.0	0.05	14.80	0.01	2.346	8.21	0.40	7.5	92.5	0.0	-0.78	0.38	0.58	2.00	3.9	0.003	0.76	0.0	0.04	17.17	0.00	2.614	9.07	2.81	6.0	94.0	0.0	0.09	0.29	0.32	0.52	1.22	2292	274	2	0	1	0	0	logfile
✔	8X5Y	38075	2024-10-09	2023-11-20	3.0	3.88	3.52	3.9	0.013	0.90	0.0	0.05	14.80	0.01	2.346	8.21	0.40	7.5	92.5	0.0	-0.78	0.38	0.58	2.00	3.9	0.004	0.80	0.0	0.04	16.86	0.01	2.588	9.07	2.81	6.7	93.3	0.0	-0.34	0.31	0.33	0.54	1.31	2292	274	2	0	1	0	0	logfile
✔	8X64	38079	2024-02-13	2023-11-20	3.4	4.16	3.79	4.1	0.005	0.90	1.0	0.05	17.36	0.01	2.290	13.75	0.42	7.5	92.5	0.0	-0.76	0.45	0.61	2.20	4.1	0.005	0.84	0.0	0.04	18.19	0.01	2.112	13.30	5.44	8.6	91.4	0.0	-1.11	1.15	0.41	0.61	1.33	2189	263	2	0	1	0	0	logfile
✔	8X5Y	38075	2025-02-10	2023-11-20	3.0	3.88	3.52	3.9	0.013	0.90	0.0	0.05	14.80	0.01	2.346	8.21	0.40	7.5	92.5	0.0	-0.78	0.38	0.58	2.00	3.9	0.003	0.76	0.0	0.04	17.17	0.00	2.614	9.07	2.81	6.0	94.0	0.0	0.09	0.29	0.32	0.52	1.22	2292	274	2	0	1	0	0	logfile
✔	8X5Y	38075	2024-02-13	2023-11-20	3.0	3.88	3.52	3.9	0.013	0.90	0.0	0.05	14.80	0.01	2.346	8.21	0.40	7.5	92.5	0.0	-0.78	0.38	0.58	2.00	3.9	0.005	0.79	0.0	0.04	17.13	0.00	2.177	9.94	2.81	7.8	92.2	0.0	-0.11	0.31	0.32	0.53	1.42	2292	274	2	0	1	0	0	logfile
✔	8V12	42878	2025-02-12	2023-11-19	3.81	4.38	3.83	4.1	0.002	0.50	0.0	0.04	11.58	0.00	2.196	11.64	2.72	1.8	98.2	0.0	2.07	0.60	0.68	-0.08	4.1	0.003	0.80	0.0	0.05	14.93	0.00	2.448	16.23	3.51	3.0	97.0	0.0	1.65	0.96	0.62	0.77	0.30	7960	979	2	0	2	0	0	logfile
✔	8V12	42878	2025-01-15	2023-11-19	3.81	4.38	3.83	4.1	0.002	0.50	0.0	0.04	11.58	0.00	2.196	11.64	2.72	1.8	98.2	0.0	2.07	0.60	0.68	-0.08	4.1	0.003	0.80	0.0	0.05	14.93	0.00	2.448	16.23	3.51	3.0	97.0	0.0	1.65	0.96	0.62	0.77	0.30	7960	979	2	0	2	0	0	logfile
✔	8V12	42878	2024-12-28	2023-11-19	3.81	4.38	3.83	4.1	0.002	0.50	0.0	0.04	11.58	0.00	2.196	11.64	2.72	1.8	98.2	0.0	2.07	0.60	0.68	-0.08	4.1	0.003	0.92	0.0	0.05	15.04	0.00	2.443	16.92	3.17	2.4	97.6	0.0	1.28	0.98	0.62	0.77	0.61	7960	979	2	0	2	0	0	logfile

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