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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 9CGX | 45588 | 2024-10-10 | 2024-07-01 | 2.97 | 2.72 | 2.90 | 3.0 | 0.011 | 2.03 | 0.0 | 0.09 | 13.19 | 0.01 | 2.510 | 0.00 | 2.82 | 4.9 | 92.4 | 2.8 | -2.56 | 0.26 | 0.63 | 4.86 | 3.1 | 0.003 | 0.62 | 0.0 | 0.05 | 16.17 | 0.00 | 2.536 | 3.45 | 1.03 | 8.1 | 91.7 | 0.2 | -2.75 | 1.36 | 0.36 | 0.77 | 5.04 | 6960 | 444 | 6 | 0 | 0 | 0 | 3540 | logfile |
✘ | 9CHQ | 45598 | 2024-11-19 | 2024-07-01 | 3.0 | 2.94 | 3.01 | 3.2 | 0.013 | 1.73 | 4.0 | 0.09 | 11.63 | 0.02 | 2.549 | 0.00 | 0.00 | 1.4 | 98.6 | 0.0 | -0.39 | 0.51 | 0.78 | 3.82 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 19104 | 1172 | 4 | 0 | 0 | 0 | 9596 | logfile |
✔ | 9CGZ | 45589 | 2024-10-10 | 2024-07-01 | 2.69 | 2.42 | 2.56 | 2.8 | 0.011 | 1.91 | 0.0 | 0.09 | 12.93 | 0.01 | 2.545 | 0.00 | 0.26 | 6.8 | 92.0 | 1.2 | -2.13 | 0.26 | 0.62 | 4.31 | 2.8 | 0.003 | 0.63 | 0.0 | 0.05 | 17.08 | 0.00 | 2.562 | 5.13 | 1.30 | 7.5 | 92.5 | 0.0 | -2.35 | 0.95 | 0.38 | 0.79 | 5.07 | 6822 | 438 | 6 | 0 | 0 | 0 | 3480 | logfile |
✔ | 9CHP | 45597 | 2025-01-22 | 2024-07-01 | 3.3 | 3.33 | 3.28 | 3.4 | 0.013 | 1.75 | 0.0 | 0.09 | 11.61 | 0.02 | 2.568 | 0.00 | 0.00 | 1.8 | 98.2 | 0.0 | -0.91 | 0.53 | 0.78 | 3.14 | 3.4 | 0.003 | 0.51 | 0.0 | 0.04 | 15.32 | 0.00 | 2.439 | 1.78 | 1.18 | 4.0 | 96.0 | 0.0 | 2.56 | 1.28 | 0.52 | 0.78 | 3.03 | 19104 | 1172 | 4 | 0 | 0 | 0 | 9596 | logfile |
✔ | 9CGX | 45588 | 2024-09-24 | 2024-07-01 | 2.97 | 2.72 | 2.90 | 3.0 | 0.011 | 2.03 | 0.0 | 0.09 | 13.19 | 0.01 | 2.510 | 0.00 | 2.82 | 4.9 | 92.4 | 2.8 | -2.56 | 0.26 | 0.63 | 4.86 | 3.1 | 0.003 | 0.62 | 0.0 | 0.05 | 16.17 | 0.00 | 2.536 | 3.45 | 1.03 | 8.1 | 91.7 | 0.2 | -2.75 | 1.36 | 0.36 | 0.77 | 5.04 | 6960 | 444 | 6 | 0 | 0 | 0 | 3540 | logfile |
✔ | 9CHR | 45599 | 2024-10-14 | 2024-07-01 | 3.5 | 3.52 | 3.44 | 3.6 | 0.013 | 1.70 | 0.0 | 0.09 | 11.42 | 0.02 | 2.557 | 0.00 | 0.00 | 2.2 | 97.8 | 0.0 | -0.87 | 0.50 | 0.76 | 3.88 | 3.6 | 0.004 | 0.57 | 0.0 | 0.04 | 14.75 | 0.00 | 2.403 | 2.99 | 0.98 | 4.8 | 95.2 | 0.0 | 2.04 | 0.90 | 0.51 | 0.77 | 2.67 | 19104 | 1172 | 4 | 0 | 0 | 0 | 9596 | logfile |
✔ | 9CHR | 45599 | 2024-11-19 | 2024-07-01 | 3.5 | 3.52 | 3.44 | 3.6 | 0.013 | 1.70 | 0.0 | 0.09 | 11.42 | 0.02 | 2.557 | 0.00 | 0.00 | 2.2 | 97.8 | 0.0 | -0.87 | 0.50 | 0.76 | 3.88 | 3.6 | 0.004 | 0.57 | 0.0 | 0.04 | 14.75 | 0.00 | 2.403 | 2.99 | 0.98 | 4.8 | 95.2 | 0.0 | 2.04 | 0.90 | 0.51 | 0.77 | 2.67 | 19104 | 1172 | 4 | 0 | 0 | 0 | 9596 | logfile |
✔ | 9CHP | 45597 | 2024-10-14 | 2024-07-01 | 3.3 | 3.33 | 3.28 | 3.4 | 0.013 | 1.75 | 0.0 | 0.09 | 11.61 | 0.02 | 2.568 | 0.00 | 0.00 | 1.8 | 98.2 | 0.0 | -0.91 | 0.53 | 0.78 | 3.14 | 3.4 | 0.004 | 0.56 | 0.0 | 0.04 | 15.49 | 0.00 | 2.433 | 1.73 | 1.18 | 4.9 | 95.1 | 0.0 | 2.07 | 1.28 | 0.52 | 0.78 | 2.96 | 19104 | 1172 | 4 | 0 | 0 | 0 | 9596 | logfile |
✔ | 9CGZ | 45589 | 2025-03-12 | 2024-07-01 | 2.69 | 2.42 | 2.57 | 2.8 | 0.011 | 1.91 | 0.0 | 0.09 | 12.93 | 0.01 | 2.545 | 0.00 | 0.26 | 6.8 | 92.0 | 1.2 | -2.13 | 0.26 | 0.62 | 4.31 | 2.8 | 0.003 | 0.63 | 0.0 | 0.05 | 17.74 | 0.00 | 2.493 | 4.99 | 1.82 | 7.0 | 93.0 | 0.0 | -2.43 | 0.97 | 0.39 | 0.79 | 5.10 | 6822 | 438 | 6 | 0 | 0 | 0 | 3480 | logfile |
✔ | 9CHQ | 45598 | 2024-09-28 | 2024-07-01 | 3.0 | 2.94 | 3.01 | 3.2 | 0.013 | 1.73 | 4.0 | 0.09 | 11.63 | 0.02 | 2.549 | 0.00 | 0.00 | 1.4 | 98.6 | 0.0 | -0.39 | 0.51 | 0.78 | 3.82 | 3.2 | 0.003 | 0.53 | 0.0 | 0.04 | 15.94 | 0.01 | 2.424 | 2.04 | 0.59 | 2.8 | 97.2 | 0.0 | 2.33 | 1.72 | 0.48 | 0.77 | 3.22 | 19104 | 1172 | 4 | 0 | 0 | 0 | 9596 | logfile |
✔ | 9CHR | 45599 | 2025-01-22 | 2024-07-01 | 3.5 | 3.52 | 3.44 | 3.6 | 0.013 | 1.70 | 0.0 | 0.09 | 11.42 | 0.02 | 2.557 | 0.00 | 0.00 | 2.2 | 97.8 | 0.0 | -0.87 | 0.50 | 0.76 | 3.88 | 3.6 | 0.003 | 0.55 | 0.0 | 0.04 | 14.73 | 0.00 | 2.413 | 2.99 | 0.98 | 4.4 | 95.6 | 0.0 | 2.33 | 0.91 | 0.51 | 0.77 | 2.64 | 19104 | 1172 | 4 | 0 | 0 | 0 | 9596 | logfile |
✔ | 9CGX | 45588 | 2025-02-12 | 2024-07-01 | 2.97 | 2.72 | 2.90 | 3.0 | 0.011 | 2.03 | 0.0 | 0.09 | 13.19 | 0.01 | 2.510 | 0.00 | 2.82 | 4.9 | 92.4 | 2.8 | -2.56 | 0.26 | 0.63 | 4.86 | 3.1 | 0.003 | 0.63 | 0.0 | 0.05 | 16.40 | 0.00 | 2.529 | 3.74 | 1.28 | 7.6 | 92.1 | 0.2 | -2.80 | 1.38 | 0.35 | 0.77 | 4.81 | 6960 | 444 | 6 | 0 | 0 | 0 | 3540 | logfile |
✔ | 9CGX | 45588 | 2025-03-12 | 2024-07-01 | 2.97 | 2.72 | 2.89 | 3.0 | 0.011 | 2.03 | 0.0 | 0.09 | 13.19 | 0.01 | 2.510 | 0.00 | 2.82 | 4.9 | 92.4 | 2.8 | -2.56 | 0.26 | 0.63 | 4.86 | 3.1 | 0.003 | 0.63 | 0.0 | 0.05 | 16.42 | 0.00 | 2.530 | 3.74 | 1.28 | 7.9 | 91.9 | 0.2 | -2.78 | 1.38 | 0.36 | 0.78 | 4.88 | 6960 | 444 | 6 | 0 | 0 | 0 | 3540 | logfile |
✔ | 9CGX | 45588 | 2024-11-14 | 2024-07-01 | 2.97 | 2.72 | 2.90 | 3.0 | 0.011 | 2.03 | 0.0 | 0.09 | 13.19 | 0.01 | 2.510 | 0.00 | 2.82 | 4.9 | 92.4 | 2.8 | -2.56 | 0.26 | 0.63 | 4.86 | 3.1 | 0.003 | 0.62 | 0.0 | 0.05 | 16.17 | 0.00 | 2.536 | 3.45 | 1.03 | 8.1 | 91.7 | 0.2 | -2.75 | 1.36 | 0.36 | 0.77 | 5.04 | 6960 | 444 | 6 | 0 | 0 | 0 | 3540 | logfile |
✔ | 9CGZ | 45589 | 2024-12-27 | 2024-07-01 | 2.69 | 2.42 | 2.56 | 2.8 | 0.011 | 1.91 | 0.0 | 0.09 | 12.93 | 0.01 | 2.545 | 0.00 | 0.26 | 6.8 | 92.0 | 1.2 | -2.13 | 0.26 | 0.62 | 4.31 | 2.8 | 0.003 | 0.63 | 0.0 | 0.05 | 17.08 | 0.00 | 2.562 | 5.13 | 1.30 | 7.5 | 92.5 | 0.0 | -2.35 | 0.95 | 0.38 | 0.79 | 5.07 | 6822 | 438 | 6 | 0 | 0 | 0 | 3480 | logfile |
✘ | 9CGi | 45580 | 2024-12-31 | 2024-06-29 | 2.92 | 3.60 | 3.10 | 3.4 | 0.005 | 0.88 | 2.0 | 0.05 | 12.93 | 0.01 | 2.249 | 3.35 | 0.24 | 2.3 | 97.7 | 0.0 | -0.05 | 0.85 | 0.88 | 3.34 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14751 | 1839 | 5 | 0 | 0 | 0 | 0 | logfile |
✔ | 9CGi | 45580 | 2025-01-20 | 2024-06-29 | 2.92 | 3.60 | 3.10 | 3.4 | 0.005 | 0.88 | 2.0 | 0.05 | 12.93 | 0.01 | 2.249 | 3.35 | 0.24 | 2.3 | 97.7 | 0.0 | -0.05 | 0.85 | 0.88 | 3.34 | 3.4 | 0.003 | 0.67 | 0.0 | 0.04 | 15.75 | 0.00 | 2.446 | 6.40 | 1.32 | 2.6 | 97.4 | 0.1 | 2.00 | 1.45 | 0.76 | 0.84 | 2.67 | 14751 | 1839 | 5 | 0 | 0 | 0 | 0 | logfile |
✘ | 9CGi | 45580 | 2024-09-27 | 2024-06-29 | 2.92 | 3.60 | 3.10 | 3.4 | 0.005 | 0.88 | 2.0 | 0.05 | 12.93 | 0.01 | 2.249 | 3.35 | 0.24 | 2.3 | 97.7 | 0.0 | -0.05 | 0.85 | 0.88 | 3.34 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14751 | 1839 | 5 | 0 | 0 | 0 | 0 | logfile |
✘ | 9CGi | 45580 | 2024-10-13 | 2024-06-29 | 2.92 | 3.60 | 3.10 | 3.4 | 0.005 | 0.88 | 2.0 | 0.05 | 12.93 | 0.01 | 2.249 | 3.35 | 0.24 | 2.3 | 97.7 | 0.0 | -0.05 | 0.85 | 0.88 | 3.34 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14751 | 1839 | 5 | 0 | 0 | 0 | 0 | logfile |
✘ | 9CGi | 45580 | 2024-11-17 | 2024-06-29 | 2.92 | 3.60 | 3.10 | 3.4 | 0.005 | 0.88 | 2.0 | 0.05 | 12.93 | 0.01 | 2.249 | 3.35 | 0.24 | 2.3 | 97.7 | 0.0 | -0.05 | 0.85 | 0.88 | 3.34 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 14751 | 1839 | 5 | 0 | 0 | 0 | 0 | logfile |