Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8R5o	18935	2024-09-25	2023-11-17	2.49	2.13	—	1.4	0.002	0.45	0.0	0.04	11.77	0.00	2.042	4.11	0.44	2.7	97.2	0.0	0.35	0.83	0.86	5.83	1.4	0.003	0.54	0.0	0.04	15.13	0.00	1.962	4.39	1.08	2.9	97.0	0.0	1.27	0.39	0.84	0.87	5.27	54473	6680	41	0	3	255	0	logfile
✘	8R5o	18935	2024-11-20	2023-11-17	2.49	2.13	—	1.4	0.002	0.45	0.0	0.04	11.77	0.00	2.042	4.11	0.44	2.7	97.2	0.0	0.35	0.83	0.86	5.83	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	54473	6680	41	0	3	255	0	logfile
✔	8R5o	18935	2025-01-16	2023-11-17	2.49	2.13	—	1.4	0.002	0.45	0.0	0.04	11.77	0.00	2.042	4.11	0.44	2.7	97.2	0.0	0.35	0.83	0.86	5.83	1.4	0.002	0.53	0.0	0.04	15.16	0.00	1.995	4.62	0.86	2.9	97.1	0.0	1.29	0.39	0.83	0.87	5.15	54473	6680	41	0	3	255	0	logfile
✔	8R5o	18935	2024-06-24	2023-11-17	2.49	2.13	—	1.4	0.002	0.45	0.0	0.04	11.77	0.00	2.042	4.11	0.44	2.7	97.2	0.0	0.35	0.83	0.86	5.83	1.4	0.005	0.60	0.0	0.05	15.23	0.01	1.988	5.46	1.32	3.2	96.8	0.0	0.79	0.68	0.84	0.87	5.50	54473	6680	41	0	3	255	0	logfile
✔	8R55	18901	2024-02-24	2023-11-16	3.57	3.93	3.88	3.8	0.006	1.01	9.0	0.05	24.53	0.01	1.933	10.81	1.40	6.9	92.9	0.2	-2.49	0.70	0.81	0.58	3.7	0.004	0.70	0.0	0.04	24.15	0.00	2.025	18.42	7.99	8.3	91.6	0.1	-2.00	0.52	0.72	0.83	0.57	143867	5438	53	4715	0	0	0	logfile
✘	8X4Z	38056	2024-08-09	2023-11-16	3.49	3.81	3.57	3.8	0.005	0.82	0.0	0.06	21.37	0.01	2.094	12.13	0.50	7.7	92.3	0.1	-1.62	0.78	0.82	2.04	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	25839	3192	24	0	66	0	0	logfile
✔	8X56	38064	2024-08-09	2023-11-16	3.93	4.27	4.00	4.1	0.004	0.81	0.0	0.06	21.40	0.01	2.064	15.93	0.58	7.0	92.8	0.2	-1.65	0.83	0.80	0.99	4.1	0.003	0.70	0.0	0.05	16.64	0.00	2.319	10.37	3.17	7.2	92.7	0.1	-1.26	1.16	0.84	0.81	1.05	25749	3189	21	0	60	0	0	logfile
✔	8X55	38063	2024-08-09	2023-11-16	3.75	4.07	3.87	3.9	0.005	0.82	0.0	0.06	20.86	0.01	2.075	13.49	0.40	7.4	92.5	0.1	-1.54	0.80	0.80	1.47	3.9	0.005	0.71	0.0	0.05	16.70	0.00	2.381	10.00	3.96	7.8	92.1	0.1	-1.06	1.19	0.81	0.82	1.57	25749	3189	21	0	60	0	0	logfile
✔	8X50	38057	2024-08-09	2023-11-16	3.82	4.35	4.09	4.0	0.004	0.81	0.0	0.06	21.38	0.01	2.087	15.86	0.32	7.9	92.0	0.1	-1.40	0.82	0.80	1.09	4.0	0.003	0.71	0.0	0.05	16.56	0.00	2.437	11.21	3.13	8.3	91.7	0.1	-1.09	1.25	0.83	0.83	1.44	25828	3192	23	0	65	0	0	logfile
✔	8X51	38058	2024-12-28	2023-11-16	2.92	3.16	2.94	3.2	0.008	1.27	0.0	0.07	18.47	0.01	2.328	1.89	0.00	7.3	92.3	0.3	-3.65	0.56	0.76	3.45	3.2	0.004	0.69	0.0	0.05	20.56	0.00	2.336	5.72	3.07	6.2	93.5	0.3	-0.69	1.34	0.61	0.80	2.69	8095	885	6	42	2	0	0	logfile
✔	8X51	38058	2025-03-12	2023-11-16	2.92	3.16	2.94	3.2	0.008	1.27	0.0	0.07	18.47	0.01	2.328	1.89	0.00	7.3	92.3	0.3	-3.65	0.56	0.76	3.45	3.2	0.005	0.73	0.0	0.05	20.77	0.00	2.328	6.04	2.58	6.0	93.7	0.3	-0.72	1.33	0.62	0.80	2.78	8095	885	6	42	2	0	0	logfile
✔	8X51	38058	2024-10-10	2023-11-16	2.92	3.16	2.94	3.2	0.008	1.27	0.0	0.07	18.47	0.01	2.328	1.89	0.00	7.3	92.3	0.3	-3.65	0.56	0.76	3.45	3.2	0.004	0.69	0.0	0.05	20.56	0.00	2.336	5.72	3.07	6.2	93.5	0.3	-0.69	1.34	0.61	0.80	2.69	8095	885	6	42	2	0	0	logfile
✔	8X51	38058	2024-08-03	2023-11-16	2.92	3.16	2.94	3.2	0.008	1.27	0.0	0.07	18.47	0.01	2.328	1.89	0.00	7.3	92.3	0.3	-3.65	0.56	0.76	3.45	3.2	0.004	0.69	0.0	0.05	20.56	0.00	2.336	5.72	3.07	6.2	93.5	0.3	-0.69	1.34	0.61	0.80	2.69	8095	885	6	42	2	0	0	logfile
✔	8X51	38058	2024-11-15	2023-11-16	2.92	3.16	2.94	3.2	0.008	1.27	0.0	0.07	18.47	0.01	2.328	1.89	0.00	7.3	92.3	0.3	-3.65	0.56	0.76	3.45	3.2	0.004	0.69	0.0	0.05	20.56	0.00	2.336	5.72	3.07	6.2	93.5	0.3	-0.69	1.34	0.61	0.80	2.69	8095	885	6	42	2	0	0	logfile
✔	8X51	38058	2025-01-15	2023-11-16	2.92	3.16	2.94	3.2	0.008	1.27	0.0	0.07	18.47	0.01	2.328	1.89	0.00	7.3	92.3	0.3	-3.65	0.56	0.76	3.45	3.2	0.003	0.68	0.0	0.04	20.64	0.00	2.354	5.60	2.58	6.5	93.1	0.3	-0.57	1.56	0.61	0.79	2.77	8095	885	6	42	2	0	0	logfile
✔	8X51	38058	2025-02-12	2023-11-16	2.92	3.16	2.94	3.2	0.008	1.27	0.0	0.07	18.47	0.01	2.328	1.89	0.00	7.3	92.3	0.3	-3.65	0.56	0.76	3.45	3.2	0.003	0.68	0.0	0.04	20.64	0.00	2.354	5.60	2.58	6.5	93.1	0.3	-0.57	1.56	0.61	0.79	2.77	8095	885	6	42	2	0	0	logfile
✔	8X51	38058	2024-09-24	2023-11-16	2.92	3.16	2.94	3.2	0.008	1.27	0.0	0.07	18.47	0.01	2.328	1.89	0.00	7.3	92.3	0.3	-3.65	0.56	0.76	3.45	3.2	0.004	0.69	0.0	0.05	20.56	0.00	2.336	5.72	3.07	6.2	93.5	0.3	-0.69	1.34	0.61	0.80	2.69	8095	885	6	42	2	0	0	logfile
✘	8X51	38058	2024-07-19	2023-11-16	2.92	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	8095	885	6	42	2	0	0	logfile
✔	8X51	38058	2024-06-25	2023-11-16	2.92	3.16	2.94	3.2	0.008	1.27	0.0	0.07	18.47	0.01	2.328	1.89	0.00	7.3	92.3	0.3	-3.65	0.56	0.76	3.45	3.2	0.003	0.68	0.0	0.04	20.66	0.00	2.178	6.73	2.58	6.5	93.1	0.3	-0.69	1.56	0.61	0.79	2.83	8095	885	6	42	2	0	0	logfile
✔	8X52	38059	2024-12-29	2023-11-16	2.9	3.11	2.86	3.3	0.009	1.13	7.0	0.07	14.34	0.01	1.598	7.57	0.88	4.7	95.2	0.2	-3.49	0.49	0.63	2.82	3.2	0.003	0.63	0.0	0.04	14.80	0.00	2.422	6.94	2.10	2.9	97.0	0.1	0.80	0.78	0.66	0.83	2.78	10907	1334	14	0	25	0	0	logfile

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