Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8XYH	38773	2025-05-25	2024-01-19	2.5	3.49	2.61	3.1	0.005	0.83	3.0	0.07	12.95	0.01	2.159	5.64	0.14	6.6	93.2	0.2	-1.03	0.87	0.87	4.04	3.1	0.003	0.66	0.0	0.05	14.49	0.00	2.445	3.72	1.50	5.9	94.0	0.1	-0.62	0.60	0.87	0.87	3.47	25878	3219	9	0	54	0	0	logfile
✔	8XXY	38765	2025-05-09	2024-01-19	3.68	3.84	3.65	3.8	0.002	0.47	0.0	0.03	14.53	0.00	2.314	2.90	0.00	0.4	99.6	0.0	2.29	0.49	0.73	1.26	3.8	0.003	0.73	0.0	0.04	16.07	0.00	2.575	9.75	5.13	0.4	99.6	0.0	2.79	1.22	0.55	0.76	1.61	1838	237	1	0	0	0	0	logfile
✔	8XYJ	38775	2025-03-05	2024-01-19	3.33	3.55	3.07	3.5	0.012	1.02	0.0	0.05	15.95	0.01	2.196	17.47	8.03	10.1	89.5	0.4	-3.13	0.56	0.85	2.49	3.5	0.004	0.72	0.0	0.04	15.56	0.00	2.560	10.18	4.92	7.7	92.3	0.0	1.20	0.41	0.53	0.85	2.30	3582	460	2	0	0	0	0	logfile
✔	8XYJ	38775	2025-02-11	2024-01-19	3.33	3.55	3.09	3.5	0.012	1.02	0.0	0.05	15.95	0.01	2.196	17.47	8.03	10.1	89.5	0.4	-3.13	0.56	0.85	2.49	3.6	0.003	0.71	0.0	0.04	15.49	0.00	2.568	10.04	4.92	7.2	92.8	0.0	1.30	0.42	0.53	0.84	2.45	3582	460	2	0	0	0	0	logfile
✔	8XXY	38765	2025-04-26	2024-01-19	3.68	3.84	3.65	3.8	0.002	0.47	0.0	0.03	14.53	0.00	2.314	2.90	0.00	0.4	99.6	0.0	2.29	0.49	0.73	1.26	3.8	0.003	0.78	0.0	0.04	15.96	0.00	2.581	8.70	3.59	0.9	99.1	0.0	2.84	1.23	0.54	0.76	1.41	1838	237	1	0	0	0	0	logfile
✔	8XY6	38767	2025-05-29	2024-01-19	3.0	3.37	3.20	3.3	0.005	0.70	0.0	0.05	16.82	0.01	1.966	12.95	2.80	5.7	93.9	0.4	-0.12	0.79	0.86	2.91	3.3	0.003	0.68	0.0	0.05	17.29	0.00	2.036	9.40	2.64	5.0	94.7	0.3	0.34	0.32	0.77	0.85	2.52	32407	4059	13	0	7	0	0	logfile
✔	8XYJ	38775	2025-05-09	2024-01-19	3.33	3.55	3.07	3.5	0.012	1.02	0.0	0.05	15.95	0.01	2.196	17.47	8.03	10.1	89.5	0.4	-3.13	0.56	0.85	2.49	3.5	0.003	0.71	0.0	0.04	15.49	0.00	2.568	10.04	4.92	7.2	92.8	0.0	1.30	0.42	0.53	0.84	2.45	3582	460	2	0	0	0	0	logfile
✔	8XXY	38765	2025-03-05	2024-01-19	3.68	3.84	3.65	3.8	0.002	0.47	0.0	0.03	14.53	0.00	2.314	2.90	0.00	0.4	99.6	0.0	2.29	0.49	0.73	1.26	3.8	0.003	0.78	0.0	0.04	15.96	0.00	2.581	8.70	3.59	0.9	99.1	0.0	2.84	1.23	0.54	0.76	1.41	1838	237	1	0	0	0	0	logfile
✔	8XYJ	38775	2025-04-26	2024-01-19	3.33	3.55	3.07	3.5	0.012	1.02	0.0	0.05	15.95	0.01	2.196	17.47	8.03	10.1	89.5	0.4	-3.13	0.56	0.85	2.49	3.5	0.004	0.72	0.0	0.04	15.56	0.00	2.560	10.18	4.92	7.7	92.3	0.0	1.20	0.41	0.53	0.85	2.30	3582	460	2	0	0	0	0	logfile
✔	8XXi	38750	2025-03-05	2024-01-18	3.04	3.42	2.81	3.4	0.007	0.83	0.0	0.05	17.38	0.00	2.180	13.07	10.00	8.0	91.6	0.4	-2.27	0.55	0.83	3.11	3.4	0.003	0.64	0.0	0.04	16.39	0.00	2.305	7.49	2.82	6.5	93.5	0.0	1.55	3.43	0.42	0.77	2.00	3622	466	3	0	1	0	0	logfile
✔	8XXi	38750	2025-04-26	2024-01-18	3.04	3.42	2.81	3.4	0.007	0.83	0.0	0.05	17.38	0.00	2.180	13.07	10.00	8.0	91.6	0.4	-2.27	0.55	0.83	3.11	3.4	0.003	0.64	0.0	0.04	16.39	0.00	2.305	7.49	2.82	6.5	93.5	0.0	1.55	3.43	0.42	0.77	2.00	3622	466	3	0	1	0	0	logfile
✔	8XXi	38750	2025-05-09	2024-01-18	3.04	3.42	2.81	3.4	0.007	0.83	0.0	0.05	17.38	0.00	2.180	13.07	10.00	8.0	91.6	0.4	-2.27	0.55	0.83	3.11	3.4	0.004	0.65	0.0	0.04	16.47	0.00	2.278	6.67	3.08	6.5	93.5	0.0	1.41	3.43	0.43	0.78	2.26	3622	466	3	0	1	0	0	logfile
✔	8XXi	38750	2025-02-11	2024-01-18	3.04	3.42	2.82	3.4	0.007	0.83	0.0	0.05	17.38	0.00	2.180	13.07	10.00	8.0	91.6	0.4	-2.27	0.55	0.83	3.11	3.4	0.004	0.65	0.0	0.04	16.47	0.00	2.278	6.67	3.08	6.5	93.5	0.0	1.41	3.43	0.43	0.78	2.26	3622	466	3	0	1	0	0	logfile
✔	8XXH	38749	2025-04-30	2024-01-18	2.8	3.03	2.86	3.0	0.003	0.48	0.0	0.04	12.74	0.00	2.230	4.80	0.00	3.0	97.0	0.0	0.50	0.74	0.79	2.29	2.9	0.004	0.75	0.0	0.05	16.35	0.00	2.473	7.51	2.80	3.8	96.2	0.0	0.96	1.30	0.78	0.87	2.80	9646	1264	7	0	0	0	0	logfile
✔	8XXP	38757	2025-05-26	2024-01-18	2.6	2.85	2.68	2.8	0.006	0.65	0.0	0.05	16.53	0.00	1.896	9.18	2.01	3.9	95.8	0.3	-0.11	0.76	0.88	4.23	2.8	0.004	0.63	0.0	0.05	16.90	0.00	1.945	7.95	2.44	3.6	96.1	0.3	0.42	1.86	0.77	0.88	3.88	27650	3474	12	0	7	0	0	logfile
✔	8XXH	38749	2025-02-14	2024-01-18	2.8	3.03	2.86	3.0	0.003	0.48	0.0	0.04	12.74	0.00	2.230	4.80	0.00	3.0	97.0	0.0	0.50	0.74	0.79	2.29	2.9	0.005	0.83	0.0	0.05	16.52	0.00	2.154	7.51	2.70	3.5	96.5	0.0	0.94	1.30	0.78	0.87	2.69	9646	1264	7	0	0	0	0	logfile
✔	8XXH	38749	2025-03-14	2024-01-18	2.8	3.03	2.86	3.0	0.003	0.48	0.0	0.04	12.74	0.00	2.230	4.80	0.00	3.0	97.0	0.0	0.50	0.74	0.79	2.29	2.9	0.004	0.72	0.0	0.05	16.28	0.00	2.463	7.41	1.83	3.4	96.6	0.0	1.08	1.30	0.77	0.86	2.62	9646	1264	7	0	0	0	0	logfile
✔	8XXH	38749	2025-05-13	2024-01-18	2.8	3.03	2.86	3.0	0.003	0.48	0.0	0.04	12.74	0.00	2.230	4.80	0.00	3.0	97.0	0.0	0.50	0.74	0.79	2.29	2.9	0.006	0.83	0.0	0.05	16.34	0.00	2.478	7.93	2.12	3.6	96.4	0.0	0.86	1.31	0.78	0.87	2.84	9646	1264	7	0	0	0	0	logfile
✔	8XXR	38759	2025-03-13	2024-01-18	3.17	3.53	3.32	3.6	0.003	0.53	0.0	0.04	14.88	0.00	2.204	7.77	0.43	3.2	96.8	0.0	0.40	0.59	0.76	1.90	3.6	0.003	0.57	0.0	0.04	15.79	0.00	2.526	6.25	2.71	3.5	96.5	0.0	0.75	1.09	0.60	0.77	1.58	8630	1125	5	0	0	0	0	logfile
✔	8XXR	38759	2025-02-13	2024-01-18	3.17	3.53	3.33	3.6	0.003	0.53	0.0	0.04	14.88	0.00	2.204	7.77	0.43	3.2	96.8	0.0	0.40	0.59	0.76	1.90	3.6	0.002	0.57	0.0	0.04	15.77	0.00	2.510	6.37	2.06	2.4	97.6	0.0	0.73	1.09	0.59	0.76	1.66	8630	1125	5	0	0	0	0	logfile

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