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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8X0M | 37982 | 2025-01-26 | 2023-11-04 | 3.5 | 2.62 | 3.64 | 3.4 | 0.004 | 0.70 | 1.0 | 0.05 | 16.79 | 0.01 | 2.146 | 9.45 | 0.68 | 4.6 | 95.4 | 0.0 | -0.18 | 0.49 | 0.77 | 1.96 | 2.3 | 0.004 | 0.70 | 0.0 | 0.05 | 17.07 | 0.00 | 2.230 | 8.11 | 3.81 | 4.7 | 95.3 | 0.0 | -0.23 | 1.17 | 0.50 | 0.78 | 2.25 | 24274 | 3128 | 22 | 0 | 17 | 0 | 0 | logfile |
✔ | 8X0E | 37976 | 2024-11-16 | 2023-11-04 | 3.4 | 3.82 | 3.30 | 3.5 | 0.007 | 0.99 | 0.0 | 0.06 | 16.10 | 0.01 | 2.191 | 9.40 | 1.29 | 8.0 | 91.8 | 0.2 | -1.21 | 0.72 | 0.84 | 2.10 | 3.5 | 0.003 | 0.65 | 0.0 | 0.04 | 15.59 | 0.00 | 2.551 | 7.00 | 2.80 | 6.8 | 93.2 | 0.0 | -0.56 | 0.41 | 0.74 | 0.87 | 1.81 | 12086 | 1530 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8X0G | 37978 | 2024-12-30 | 2023-11-04 | 3.0 | 3.25 | 2.87 | 3.2 | 0.007 | 0.87 | 0.0 | 0.06 | 17.33 | 0.01 | 2.251 | 10.31 | 0.76 | 7.9 | 91.7 | 0.4 | -1.70 | 0.71 | 0.86 | 2.78 | 3.2 | 0.004 | 0.66 | 0.0 | 0.04 | 16.88 | 0.00 | 2.526 | 7.70 | 2.95 | 6.1 | 93.9 | 0.0 | -0.69 | 0.36 | 0.73 | 0.87 | 2.66 | 12129 | 1530 | 6 | 0 | 4 | 31 | 0 | logfile |
✔ | 8X0E | 37976 | 2025-01-18 | 2023-11-04 | 3.4 | 3.82 | 3.30 | 3.5 | 0.007 | 0.99 | 0.0 | 0.06 | 16.10 | 0.01 | 2.191 | 9.40 | 1.29 | 8.0 | 91.8 | 0.2 | -1.21 | 0.72 | 0.84 | 2.10 | 3.5 | 0.003 | 0.67 | 0.0 | 0.04 | 15.54 | 0.00 | 2.530 | 6.71 | 2.72 | 6.0 | 93.9 | 0.1 | -0.53 | 0.40 | 0.73 | 0.86 | 1.80 | 12086 | 1530 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8X0G | 37978 | 2024-11-16 | 2023-11-04 | 3.0 | 3.25 | 2.87 | 3.2 | 0.007 | 0.87 | 0.0 | 0.06 | 17.33 | 0.01 | 2.251 | 10.31 | 0.76 | 7.9 | 91.7 | 0.4 | -1.70 | 0.71 | 0.86 | 2.78 | 3.2 | 0.004 | 0.66 | 0.0 | 0.04 | 16.88 | 0.00 | 2.526 | 7.70 | 2.95 | 6.1 | 93.9 | 0.0 | -0.69 | 0.36 | 0.73 | 0.87 | 2.66 | 12129 | 1530 | 6 | 0 | 4 | 31 | 0 | logfile |
✔ | 8X0G | 37978 | 2025-01-18 | 2023-11-04 | 3.0 | 3.25 | 2.87 | 3.2 | 0.007 | 0.87 | 0.0 | 0.06 | 17.33 | 0.01 | 2.251 | 10.31 | 0.76 | 7.9 | 91.7 | 0.4 | -1.70 | 0.71 | 0.86 | 2.78 | 3.2 | 0.003 | 0.66 | 0.0 | 0.04 | 16.78 | 0.00 | 2.583 | 7.45 | 2.87 | 5.9 | 94.1 | 0.0 | -0.57 | 0.38 | 0.73 | 0.87 | 2.52 | 12129 | 1530 | 6 | 0 | 4 | 31 | 0 | logfile |
✔ | 8X0E | 37976 | 2024-12-30 | 2023-11-04 | 3.4 | 3.82 | 3.30 | 3.5 | 0.007 | 0.99 | 0.0 | 0.06 | 16.10 | 0.01 | 2.191 | 9.40 | 1.29 | 8.0 | 91.8 | 0.2 | -1.21 | 0.72 | 0.84 | 2.10 | 3.5 | 0.003 | 0.65 | 0.0 | 0.04 | 15.59 | 0.00 | 2.551 | 7.00 | 2.80 | 6.8 | 93.2 | 0.0 | -0.56 | 0.41 | 0.74 | 0.87 | 1.81 | 12086 | 1530 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8UVU | 42629 | 2024-06-27 | 2023-11-04 | 3.0 | 3.23 | 2.99 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 14.70 | 0.00 | 2.246 | 8.69 | 0.00 | 4.3 | 95.7 | 0.0 | 1.70 | 0.68 | 0.83 | 2.96 | 3.2 | 0.004 | 0.65 | 0.0 | 0.04 | 16.24 | 0.00 | 2.210 | 9.67 | 3.18 | 5.1 | 94.9 | 0.0 | 1.88 | 0.26 | 0.64 | 0.83 | 2.95 | 11976 | 1516 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 8UVT | 42628 | 2025-01-18 | 2023-11-04 | 2.9 | 3.16 | 2.88 | 3.1 | 0.003 | 0.47 | 0.0 | 0.04 | 15.28 | 0.00 | 2.233 | 8.27 | 0.00 | 3.7 | 96.3 | 0.0 | 2.31 | 0.67 | 0.83 | 2.02 | 3.1 | 0.004 | 0.57 | 0.0 | 0.04 | 17.17 | 0.00 | 2.575 | 8.79 | 2.51 | 3.8 | 96.2 | 0.0 | 3.02 | 0.39 | 0.67 | 0.84 | 1.83 | 12104 | 1544 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UVT | 42628 | 2024-08-05 | 2023-11-04 | 2.9 | 3.16 | 2.88 | 3.1 | 0.003 | 0.47 | 0.0 | 0.04 | 15.28 | 0.00 | 2.233 | 8.27 | 0.00 | 3.7 | 96.3 | 0.0 | 2.31 | 0.67 | 0.83 | 2.02 | 3.1 | 0.004 | 0.56 | 0.0 | 0.04 | 17.14 | 0.00 | 2.579 | 8.87 | 1.78 | 3.9 | 96.1 | 0.0 | 3.11 | 0.39 | 0.66 | 0.83 | 1.81 | 12104 | 1544 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UVU | 42629 | 2024-07-20 | 2023-11-04 | 3.0 | 3.23 | 2.99 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 14.70 | 0.00 | 2.246 | 8.69 | 0.00 | 4.3 | 95.7 | 0.0 | 1.70 | 0.68 | 0.83 | 2.96 | 3.2 | 0.004 | 0.63 | 0.0 | 0.04 | 16.28 | 0.00 | 2.215 | 9.10 | 2.65 | 5.6 | 94.4 | 0.0 | 2.23 | 0.25 | 0.64 | 0.82 | 3.10 | 11976 | 1516 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 8UVT | 42628 | 2024-10-12 | 2023-11-04 | 2.9 | 3.16 | 2.88 | 3.1 | 0.003 | 0.47 | 0.0 | 0.04 | 15.28 | 0.00 | 2.233 | 8.27 | 0.00 | 3.7 | 96.3 | 0.0 | 2.31 | 0.67 | 0.83 | 2.02 | 3.1 | 0.003 | 0.56 | 0.0 | 0.04 | 17.10 | 0.00 | 2.582 | 8.83 | 2.00 | 3.8 | 96.2 | 0.0 | 3.18 | 0.38 | 0.67 | 0.84 | 1.85 | 12104 | 1544 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UVT | 42628 | 2024-12-30 | 2023-11-04 | 2.9 | 3.16 | 2.88 | 3.1 | 0.003 | 0.47 | 0.0 | 0.04 | 15.28 | 0.00 | 2.233 | 8.27 | 0.00 | 3.7 | 96.3 | 0.0 | 2.31 | 0.67 | 0.83 | 2.02 | 3.1 | 0.003 | 0.56 | 0.0 | 0.04 | 17.10 | 0.00 | 2.582 | 8.83 | 2.00 | 3.8 | 96.2 | 0.0 | 3.18 | 0.38 | 0.67 | 0.84 | 1.85 | 12104 | 1544 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UVT | 42628 | 2024-11-16 | 2023-11-04 | 2.9 | 3.16 | 2.88 | 3.1 | 0.003 | 0.47 | 0.0 | 0.04 | 15.28 | 0.00 | 2.233 | 8.27 | 0.00 | 3.7 | 96.3 | 0.0 | 2.31 | 0.67 | 0.83 | 2.02 | 3.1 | 0.003 | 0.56 | 0.0 | 0.04 | 17.10 | 0.00 | 2.582 | 8.83 | 2.00 | 3.8 | 96.2 | 0.0 | 3.18 | 0.38 | 0.67 | 0.84 | 1.85 | 12104 | 1544 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UVT | 42628 | 2024-09-26 | 2023-11-04 | 2.9 | 3.16 | 2.88 | 3.1 | 0.003 | 0.47 | 0.0 | 0.04 | 15.28 | 0.00 | 2.233 | 8.27 | 0.00 | 3.7 | 96.3 | 0.0 | 2.31 | 0.67 | 0.83 | 2.02 | 3.1 | 0.003 | 0.56 | 0.0 | 0.04 | 17.10 | 0.00 | 2.582 | 8.83 | 2.00 | 3.8 | 96.2 | 0.0 | 3.18 | 0.38 | 0.67 | 0.84 | 1.85 | 12104 | 1544 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UVU | 42629 | 2025-01-18 | 2023-11-04 | 3.0 | 3.23 | 2.99 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 14.70 | 0.00 | 2.246 | 8.69 | 0.00 | 4.3 | 95.7 | 0.0 | 1.70 | 0.68 | 0.83 | 2.96 | 3.2 | 0.003 | 0.62 | 0.0 | 0.04 | 16.29 | 0.00 | 2.448 | 8.40 | 2.50 | 5.1 | 94.9 | 0.0 | 2.35 | 0.26 | 0.64 | 0.82 | 2.96 | 11976 | 1516 | 8 | 0 | 8 | 0 | 0 | logfile |
✔ | 8UVT | 42628 | 2024-07-20 | 2023-11-04 | 2.9 | 3.16 | 2.88 | 3.1 | 0.003 | 0.47 | 0.0 | 0.04 | 15.28 | 0.00 | 2.233 | 8.27 | 0.00 | 3.7 | 96.3 | 0.0 | 2.31 | 0.67 | 0.83 | 2.02 | 3.1 | 0.003 | 0.52 | 0.0 | 0.04 | 17.33 | 0.00 | 2.233 | 8.79 | 2.07 | 3.9 | 96.1 | 0.0 | 3.47 | 0.35 | 0.63 | 0.82 | 1.80 | 12104 | 1544 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UVT | 42628 | 2024-06-27 | 2023-11-04 | 2.9 | 3.16 | 2.88 | 3.1 | 0.003 | 0.47 | 0.0 | 0.04 | 15.28 | 0.00 | 2.233 | 8.27 | 0.00 | 3.7 | 96.3 | 0.0 | 2.31 | 0.67 | 0.83 | 2.02 | 3.1 | 0.003 | 0.52 | 0.0 | 0.04 | 17.33 | 0.00 | 2.233 | 8.79 | 2.07 | 3.9 | 96.1 | 0.0 | 3.47 | 0.35 | 0.63 | 0.82 | 1.80 | 12104 | 1544 | 4 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UVi | 42621 | 2025-03-12 | 2023-11-03 | 2.53 | 2.73 | 2.54 | 2.8 | 0.004 | 0.75 | 4.0 | 0.05 | 14.60 | 0.01 | 2.093 | 9.69 | 0.72 | 2.1 | 97.9 | 0.0 | 1.41 | 0.60 | 0.80 | 2.95 | 2.8 | 0.003 | 0.65 | 0.0 | 0.04 | 14.69 | 0.01 | 2.295 | 10.51 | 2.63 | 1.4 | 98.6 | 0.0 | 2.36 | 5.05 | 0.61 | 0.84 | 2.70 | 8212 | 994 | 4 | 0 | 22 | 0 | 0 | logfile |
✔ | 8UVi | 42621 | 2024-12-28 | 2023-11-03 | 2.53 | 2.73 | 2.54 | 2.8 | 0.004 | 0.75 | 4.0 | 0.05 | 14.60 | 0.01 | 2.093 | 9.69 | 0.72 | 2.1 | 97.9 | 0.0 | 1.41 | 0.60 | 0.80 | 2.95 | 2.8 | 0.003 | 0.67 | 0.0 | 0.04 | 14.81 | 0.01 | 2.237 | 10.81 | 2.15 | 1.5 | 98.5 | 0.0 | 2.38 | 5.06 | 0.62 | 0.84 | 2.85 | 8212 | 994 | 4 | 0 | 22 | 0 | 0 | logfile |