Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8R2D	18839	2024-08-07	2023-11-03	3.9	4.17	3.98	4.2	0.004	0.70	0.0	0.04	15.08	0.00	1.943	14.71	0.00	7.0	93.0	0.0	-3.71	0.73	0.77	1.16	4.2	0.004	0.71	0.0	0.04	16.63	0.00	2.133	11.30	2.07	5.1	94.9	0.0	-0.65	1.42	0.73	0.77	0.88	18276	2342	5	0	2	0	0	logfile
✔	8R2D	18839	2024-09-28	2023-11-03	3.9	4.17	3.98	4.2	0.004	0.70	0.0	0.04	15.08	0.00	1.943	14.71	0.00	7.0	93.0	0.0	-3.71	0.73	0.77	1.16	4.2	0.004	0.71	0.0	0.04	16.63	0.00	2.133	11.30	2.07	5.1	94.9	0.0	-0.65	1.42	0.73	0.77	0.88	18276	2342	5	0	2	0	0	logfile
✔	8R2D	18839	2024-11-19	2023-11-03	3.9	4.17	3.98	4.2	0.004	0.70	0.0	0.04	15.08	0.00	1.943	14.71	0.00	7.0	93.0	0.0	-3.71	0.73	0.77	1.16	4.2	0.004	0.71	0.0	0.04	16.63	0.00	2.133	11.30	2.07	5.1	94.9	0.0	-0.65	1.42	0.73	0.77	0.88	18276	2342	5	0	2	0	0	logfile
✔	8UVi	42621	2025-03-12	2023-11-03	2.53	2.73	2.54	2.8	0.004	0.75	4.0	0.05	14.60	0.01	2.093	9.69	0.72	2.1	97.9	0.0	1.41	0.60	0.80	2.95	2.8	0.003	0.65	0.0	0.04	14.69	0.01	2.295	10.51	2.63	1.4	98.6	0.0	2.36	5.05	0.61	0.84	2.70	8212	994	4	0	22	0	0	logfile
✔	8X02	37965	2024-12-26	2023-11-03	3.3	3.45	3.29	3.4	0.007	0.97	0.0	0.06	10.26	0.01	2.355	1.06	0.00	5.2	94.8	0.0	-4.80	0.81	0.87	3.74	3.4	0.005	0.68	0.0	0.05	15.25	0.00	2.536	4.31	3.11	3.0	97.0	0.0	0.41	2.01	0.82	0.89	3.10	44160	5616	24	0	0	0	0	logfile
✘	8X06	37970	2024-12-28	2023-11-03	3.24	3.88	3.24	3.6	0.002	0.58	0.0	0.04	18.50	0.00	2.261	7.83	0.25	3.8	96.2	0.0	-0.94	0.77	0.76	1.37	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7053	869	4	0	0	0	0	logfile
✔	8UVi	42621	2025-01-15	2023-11-03	2.53	2.73	2.54	2.8	0.004	0.75	4.0	0.05	14.60	0.01	2.093	9.69	0.72	2.1	97.9	0.0	1.41	0.60	0.80	2.95	2.8	0.003	0.66	0.0	0.04	14.73	0.01	2.264	10.45	2.99	1.4	98.6	0.0	2.31	5.05	0.62	0.84	2.63	8212	994	4	0	22	0	0	logfile
✔	8UVi	42621	2025-02-12	2023-11-03	2.53	2.73	2.54	2.8	0.004	0.75	4.0	0.05	14.60	0.01	2.093	9.69	0.72	2.1	97.9	0.0	1.41	0.60	0.80	2.95	2.8	0.003	0.66	0.0	0.04	14.73	0.01	2.264	10.45	2.99	1.4	98.6	0.0	2.31	5.05	0.62	0.84	2.63	8212	994	4	0	22	0	0	logfile
✔	8UVi	42621	2024-12-28	2023-11-03	2.53	2.73	2.54	2.8	0.004	0.75	4.0	0.05	14.60	0.01	2.093	9.69	0.72	2.1	97.9	0.0	1.41	0.60	0.80	2.95	2.8	0.003	0.67	0.0	0.04	14.81	0.01	2.237	10.81	2.15	1.5	98.5	0.0	2.38	5.06	0.62	0.84	2.85	8212	994	4	0	22	0	0	logfile
✔	8X06	37970	2025-01-14	2023-11-03	3.24	3.88	3.24	3.6	0.002	0.58	0.0	0.04	18.50	0.00	2.261	7.83	0.25	3.8	96.2	0.0	-0.94	0.77	0.76	1.37	3.6	0.003	0.61	0.0	0.04	18.31	0.00	2.531	7.40	3.95	7.5	92.5	0.0	-1.58	1.14	0.79	0.84	2.03	7053	869	4	0	0	0	0	logfile
✔	8X06	37970	2025-02-12	2023-11-03	3.24	3.88	3.24	3.6	0.002	0.58	0.0	0.04	18.50	0.00	2.261	7.83	0.25	3.8	96.2	0.0	-0.94	0.77	0.76	1.37	3.6	0.003	0.61	0.0	0.04	18.31	0.00	2.531	7.40	3.95	7.5	92.5	0.0	-1.58	1.14	0.79	0.84	2.03	7053	869	4	0	0	0	0	logfile
✘	8X06	37970	2024-11-14	2023-11-03	3.24	3.88	3.24	3.6	0.002	0.58	0.0	0.04	18.50	0.00	2.261	7.83	0.25	3.8	96.2	0.0	-0.94	0.77	0.76	1.37	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	7053	869	4	0	0	0	0	logfile
✔	8X06	37970	2025-03-12	2023-11-03	3.24	3.88	3.24	3.6	0.002	0.58	0.0	0.04	18.50	0.00	2.261	7.83	0.25	3.8	96.2	0.0	-0.94	0.77	0.76	1.37	3.6	0.003	0.61	0.0	0.04	18.24	0.00	2.504	7.04	4.08	6.5	93.5	0.0	-1.56	1.16	0.79	0.83	2.14	7053	869	4	0	0	0	0	logfile
✔	8R1J	18818	2024-06-28	2023-11-02	3.2	3.58	—	3.5	0.003	0.54	1.0	0.04	14.46	0.00	1.901	8.01	0.00	7.1	92.7	0.2	-1.29	0.72	0.79	2.68	3.5	0.004	0.55	0.0	0.04	15.63	0.00	1.919	8.85	0.72	7.3	92.5	0.2	-0.79	0.34	0.72	0.81	2.70	67775	4237	7	0	0	0	33874	logfile
✔	8R1J	18818	2025-01-21	2023-11-02	3.2	3.58	—	3.5	0.003	0.54	1.0	0.04	14.46	0.00	1.901	8.01	0.00	7.1	92.7	0.2	-1.29	0.72	0.79	2.68	3.5	0.003	0.54	1.0	0.04	15.65	0.00	2.149	6.23	0.66	6.6	93.2	0.2	-0.69	0.34	0.72	0.81	2.61	67775	4237	7	0	0	0	33874	logfile
✔	8R1J	18818	2024-09-28	2023-11-02	3.2	3.58	—	3.5	0.003	0.54	1.0	0.04	14.46	0.00	1.901	8.01	0.00	7.1	92.7	0.2	-1.29	0.72	0.79	2.68	3.5	0.004	0.54	1.0	0.04	15.70	0.00	2.127	6.20	0.56	6.9	93.0	0.2	-0.71	0.34	0.72	0.81	2.61	67775	4237	7	0	0	0	33874	logfile
✔	8R1J	18818	2024-10-14	2023-11-02	3.2	3.58	—	3.5	0.003	0.54	1.0	0.04	14.46	0.00	1.901	8.01	0.00	7.1	92.7	0.2	-1.29	0.72	0.79	2.68	3.6	0.003	0.54	1.0	0.04	15.70	0.00	2.131	6.23	0.53	6.8	93.0	0.2	-0.63	0.34	0.72	0.81	2.57	67775	4237	7	0	0	0	33874	logfile
✔	8UUX	42600	2024-08-05	2023-11-02	2.74	2.87	2.62	2.9	0.002	0.63	0.0	0.05	15.62	0.01	2.133	3.59	0.95	5.7	94.2	0.1	-1.63	0.41	0.85	3.94	2.9	0.004	0.92	1.0	0.05	16.31	0.01	2.106	2.82	3.47	5.8	94.1	0.1	-1.15	0.22	0.42	0.85	3.54	12084	1532	9	0	3	310	0	logfile
✘	8UUX	42600	2024-07-20	2023-11-02	2.74	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	12084	1532	9	0	3	310	0	logfile
✔	8UUX	42600	2024-06-27	2023-11-02	2.74	2.87	2.62	2.9	0.002	0.63	0.0	0.05	15.62	0.01	2.133	3.59	0.95	5.7	94.2	0.1	-1.63	0.41	0.85	3.94	2.9	0.004	0.89	1.0	0.05	16.25	0.01	2.116	3.89	2.60	6.1	93.8	0.1	-1.17	0.20	0.42	0.85	3.64	12084	1532	9	0	3	310	0	logfile

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