The table shows a selection of parameters. Activate more columns using
the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✘ | 8XUS | 38682 | 2024-08-09 | 2024-01-14 | 3.18 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25713 | 3189 | 6 | 0 | 55 | 0 | 0 | logfile |
✘ | 8XUS | 38682 | 2024-09-30 | 2024-01-14 | 3.18 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25713 | 3189 | 6 | 0 | 55 | 0 | 0 | logfile |
✘ | 8XUR | 38681 | 2024-08-09 | 2024-01-14 | 3.85 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25792 | 3189 | 20 | 0 | 63 | 0 | 0 | logfile |
✔ | 8Vo5 | 43364 | 2025-05-15 | 2024-01-14 | 3.0 | 3.23 | 3.08 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 14.13 | 0.00 | 2.220 | 7.37 | 0.00 | 2.8 | 97.2 | 0.0 | -0.12 | 0.70 | 0.84 | 3.26 | 3.2 | 0.003 | 0.60 | 0.0 | 0.04 | 16.19 | 0.00 | 2.130 | 6.05 | 1.71 | 2.6 | 97.4 | 0.0 | 0.13 | 0.34 | 0.70 | 0.86 | 3.06 | 12624 | 1604 | 7 | 0 | 6 | 0 | 0 | logfile |
✔ | 8VoB | 43373 | 2025-05-14 | 2024-01-14 | 3.1 | 4.16 | 3.26 | 3.4 | 0.005 | 0.76 | 0.0 | 0.04 | 31.21 | 0.01 | 2.066 | 20.74 | 0.79 | 3.3 | 96.7 | 0.0 | 0.86 | 0.83 | 0.80 | 1.22 | 3.4 | 0.006 | 0.77 | 0.0 | 0.04 | 31.27 | 0.01 | 2.022 | 21.23 | 2.85 | 5.5 | 94.5 | 0.0 | 0.32 | 1.15 | 0.84 | 0.81 | 0.68 | 12550 | 777 | 10 | 314 | 0 | 0 | 0 | logfile |
✔ | 8Vo9 | 43368 | 2025-05-21 | 2024-01-14 | 3.4 | 3.54 | 3.37 | 3.5 | 0.003 | 0.57 | 0.0 | 0.04 | 14.00 | 0.00 | 2.167 | 8.28 | 0.00 | 3.0 | 97.0 | 0.0 | 0.42 | 0.61 | 0.78 | 2.35 | 3.5 | 0.003 | 0.62 | 0.0 | 0.04 | 15.94 | 0.00 | 2.419 | 6.92 | 1.31 | 3.1 | 96.9 | 0.0 | 0.40 | 0.47 | 0.65 | 0.83 | 2.05 | 21459 | 2723 | 13 | 0 | 12 | 0 | 0 | logfile |
✔ | 8VNZ | 43362 | 2025-05-17 | 2024-01-14 | 3.5 | 4.34 | 3.60 | 3.8 | 0.003 | 0.65 | 0.0 | 0.04 | 13.11 | 0.00 | 2.163 | 17.18 | 0.35 | 6.7 | 93.3 | 0.0 | -1.00 | 0.75 | 0.66 | 0.45 | 3.8 | 0.003 | 0.66 | 0.0 | 0.05 | 14.45 | 0.00 | 2.453 | 16.13 | 3.52 | 7.7 | 92.3 | 0.0 | -1.20 | 0.38 | 0.75 | 0.67 | 0.36 | 14771 | 1961 | 7 | 0 | 1 | 0 | 0 | logfile |
✔ | 8XVB | 38695 | 2025-05-18 | 2024-01-14 | 3.4 | 4.28 | 3.41 | 3.8 | 0.002 | 0.49 | 0.0 | 0.04 | 18.53 | 0.00 | 2.248 | 10.17 | 0.00 | 4.1 | 95.9 | 0.0 | 1.66 | 0.56 | 0.68 | 1.17 | 3.9 | 0.004 | 0.79 | 0.0 | 0.04 | 18.86 | 0.00 | 2.116 | 11.19 | 0.60 | 3.4 | 96.6 | 0.0 | 2.34 | 1.32 | 0.61 | 0.87 | 1.29 | 16728 | 1968 | 18 | 48 | 8 | 0 | 0 | logfile |
✔ | 8XVB | 38695 | 2024-12-31 | 2024-01-14 | 3.4 | 4.28 | 3.41 | 3.8 | 0.002 | 0.49 | 0.0 | 0.04 | 18.53 | 0.00 | 2.248 | 10.17 | 0.00 | 4.1 | 95.9 | 0.0 | 1.66 | 0.56 | 0.68 | 1.17 | 3.9 | 0.003 | 0.62 | 0.0 | 0.04 | 18.94 | 0.00 | 2.514 | 10.56 | 0.79 | 3.5 | 96.5 | 0.0 | 2.27 | 1.32 | 0.61 | 0.88 | 1.31 | 16728 | 1968 | 18 | 48 | 8 | 0 | 0 | logfile |
✔ | 8XVB | 38695 | 2025-01-21 | 2024-01-14 | 3.4 | 4.28 | 3.41 | 3.8 | 0.002 | 0.49 | 0.0 | 0.04 | 18.53 | 0.00 | 2.248 | 10.17 | 0.00 | 4.1 | 95.9 | 0.0 | 1.66 | 0.56 | 0.68 | 1.17 | 3.9 | 0.004 | 0.79 | 0.0 | 0.04 | 18.86 | 0.00 | 2.116 | 11.19 | 0.60 | 3.4 | 96.6 | 0.0 | 2.34 | 1.32 | 0.61 | 0.87 | 1.29 | 16728 | 1968 | 18 | 48 | 8 | 0 | 0 | logfile |
✔ | 8XVB | 38695 | 2024-11-18 | 2024-01-14 | 3.4 | 4.28 | 3.41 | 3.8 | 0.002 | 0.49 | 0.0 | 0.04 | 18.53 | 0.00 | 2.248 | 10.17 | 0.00 | 4.1 | 95.9 | 0.0 | 1.66 | 0.56 | 0.68 | 1.17 | 3.9 | 0.003 | 0.62 | 0.0 | 0.04 | 18.94 | 0.00 | 2.514 | 10.56 | 0.79 | 3.5 | 96.5 | 0.0 | 2.27 | 1.32 | 0.61 | 0.88 | 1.31 | 16728 | 1968 | 18 | 48 | 8 | 0 | 0 | logfile |
✔ | 8XVB | 38695 | 2024-10-14 | 2024-01-14 | 3.4 | 4.28 | 3.41 | 3.8 | 0.002 | 0.49 | 0.0 | 0.04 | 18.53 | 0.00 | 2.248 | 10.17 | 0.00 | 4.1 | 95.9 | 0.0 | 1.66 | 0.56 | 0.68 | 1.17 | 3.9 | 0.003 | 0.62 | 0.0 | 0.04 | 18.94 | 0.00 | 2.514 | 10.56 | 0.79 | 3.5 | 96.5 | 0.0 | 2.27 | 1.32 | 0.61 | 0.88 | 1.31 | 16728 | 1968 | 18 | 48 | 8 | 0 | 0 | logfile |
✔ | 8XVB | 38695 | 2024-09-27 | 2024-01-14 | 3.4 | 4.28 | 3.41 | 3.8 | 0.002 | 0.49 | 0.0 | 0.04 | 18.53 | 0.00 | 2.248 | 10.17 | 0.00 | 4.1 | 95.9 | 0.0 | 1.66 | 0.56 | 0.68 | 1.17 | 3.9 | 0.003 | 0.62 | 0.0 | 0.04 | 18.94 | 0.00 | 2.514 | 10.56 | 0.79 | 3.5 | 96.5 | 0.0 | 2.27 | 1.32 | 0.61 | 0.88 | 1.31 | 16728 | 1968 | 18 | 48 | 8 | 0 | 0 | logfile |
✔ | 8Vo8 | 43367 | 2025-05-21 | 2024-01-14 | 3.9 | 3.99 | 3.91 | 3.9 | 0.004 | 0.68 | 0.0 | 0.05 | 14.80 | 0.00 | 1.844 | 14.94 | 0.57 | 3.4 | 96.6 | 0.0 | -0.02 | 0.64 | 0.79 | 1.94 | 3.9 | 0.003 | 0.66 | 0.0 | 0.04 | 16.15 | 0.00 | 2.261 | 8.57 | 1.62 | 3.6 | 96.4 | 0.0 | 0.39 | 1.17 | 0.66 | 0.81 | 1.50 | 21459 | 2723 | 13 | 0 | 12 | 0 | 0 | logfile |
✘ | 8XUU | 38684 | 2025-05-09 | 2024-01-14 | 3.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3598 | 431 | 3 | 0 | 9 | 0 | 0 | logfile |
✘ | 8XUT | 38683 | 2024-08-09 | 2024-01-14 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25149 | 3126 | 6 | 0 | 49 | 0 | 0 | logfile |
✘ | 8XUT | 38683 | 2025-05-24 | 2024-01-14 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25149 | 3126 | 6 | 0 | 49 | 0 | 0 | logfile |
✘ | 8XUU | 38684 | 2024-10-09 | 2024-01-14 | 3.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3598 | 431 | 3 | 0 | 9 | 0 | 0 | logfile |
✘ | 8XUT | 38683 | 2024-09-30 | 2024-01-14 | 3.2 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 25149 | 3126 | 6 | 0 | 49 | 0 | 0 | logfile |
✘ | 8XUU | 38684 | 2024-08-02 | 2024-01-14 | 3.69 | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | — | 3598 | 431 | 3 | 0 | 9 | 0 | 0 | logfile |