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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8UUZ | 42602 | 2024-02-13 | 2023-11-02 | 3.77 | 4.50 | 3.78 | 8.8 | 0.003 | 0.73 | 0.0 | 0.04 | 13.06 | 0.00 | 2.213 | 38.18 | 12.61 | 6.6 | 93.4 | 0.0 | -1.81 | 0.61 | 0.33 | 0.27 | 8.5 | 0.003 | 0.91 | 0.0 | 0.05 | 16.74 | 0.01 | 2.249 | 38.64 | 6.52 | 8.0 | 92.0 | 0.0 | -1.98 | 1.31 | 0.75 | 0.58 | 0.64 | 2258 | 300 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UUZ | 42602 | 2025-02-11 | 2023-11-02 | 3.77 | 4.50 | 3.78 | 8.8 | 0.003 | 0.73 | 0.0 | 0.04 | 13.06 | 0.00 | 2.213 | 38.18 | 12.61 | 6.6 | 93.4 | 0.0 | -1.81 | 0.61 | 0.33 | 0.27 | 8.8 | 0.004 | 0.86 | 0.0 | 0.05 | 16.44 | 0.00 | 2.571 | 27.43 | 4.78 | 5.6 | 94.4 | 0.0 | -2.39 | 1.28 | 0.76 | 0.59 | 1.07 | 2258 | 300 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UUZ | 42602 | 2025-03-05 | 2023-11-02 | 3.77 | 4.50 | 3.76 | 8.8 | 0.003 | 0.73 | 0.0 | 0.04 | 13.06 | 0.00 | 2.213 | 38.18 | 12.61 | 6.6 | 93.4 | 0.0 | -1.81 | 0.61 | 0.33 | 0.27 | 8.5 | 0.003 | 0.93 | 0.0 | 0.05 | 16.75 | 0.00 | 2.536 | 31.32 | 5.22 | 4.2 | 95.8 | 0.0 | -2.29 | 1.41 | 0.75 | 0.58 | 1.26 | 2258 | 300 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UUZ | 42602 | 2024-06-24 | 2023-11-02 | 3.77 | 4.50 | 3.78 | 8.8 | 0.003 | 0.73 | 0.0 | 0.04 | 13.06 | 0.00 | 2.213 | 38.18 | 12.61 | 6.6 | 93.4 | 0.0 | -1.81 | 0.61 | 0.33 | 0.27 | 8.5 | 0.003 | 0.91 | 0.0 | 0.05 | 16.74 | 0.01 | 2.249 | 38.64 | 6.52 | 8.0 | 92.0 | 0.0 | -1.98 | 1.31 | 0.75 | 0.58 | 0.64 | 2258 | 300 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UUZ | 42602 | 2024-10-09 | 2023-11-02 | 3.77 | 4.50 | 3.78 | 8.8 | 0.003 | 0.73 | 0.0 | 0.04 | 13.06 | 0.00 | 2.213 | 38.18 | 12.61 | 6.6 | 93.4 | 0.0 | -1.81 | 0.61 | 0.33 | 0.27 | 8.5 | 0.004 | 0.93 | 0.0 | 0.05 | 16.67 | 0.00 | 2.504 | 33.61 | 3.48 | 6.6 | 93.4 | 0.0 | -1.96 | 1.36 | 0.75 | 0.56 | 0.90 | 2258 | 300 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8UUZ | 42602 | 2024-11-14 | 2023-11-02 | 3.77 | 4.50 | 3.78 | 8.8 | 0.003 | 0.73 | 0.0 | 0.04 | 13.06 | 0.00 | 2.213 | 38.18 | 12.61 | 6.6 | 93.4 | 0.0 | -1.81 | 0.61 | 0.33 | 0.27 | 8.5 | 0.004 | 0.93 | 0.0 | 0.05 | 16.67 | 0.00 | 2.504 | 33.61 | 3.48 | 6.6 | 93.4 | 0.0 | -1.96 | 1.36 | 0.75 | 0.56 | 0.90 | 2258 | 300 | 2 | 0 | 0 | 0 | 0 | logfile |
✔ | 8R22 | 18833 | 2024-11-17 | 2023-11-02 | 3.9 | 3.57 | 3.81 | 3.6 | 0.004 | 0.67 | 0.0 | 0.04 | 14.65 | 0.01 | 2.098 | 10.00 | 0.00 | 9.3 | 90.7 | 0.0 | -4.23 | 0.79 | 0.79 | 1.68 | 3.7 | 0.003 | 0.63 | 0.0 | 0.04 | 16.25 | 0.00 | 2.144 | 6.43 | 2.23 | 5.1 | 94.9 | 0.0 | -0.64 | 0.51 | 0.78 | 0.78 | 1.09 | 15069 | 1950 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 8R22 | 18833 | 2024-10-13 | 2023-11-02 | 3.9 | 3.57 | 3.81 | 3.6 | 0.004 | 0.67 | 0.0 | 0.04 | 14.65 | 0.01 | 2.098 | 10.00 | 0.00 | 9.3 | 90.7 | 0.0 | -4.23 | 0.79 | 0.79 | 1.68 | 3.7 | 0.003 | 0.63 | 0.0 | 0.04 | 16.25 | 0.00 | 2.144 | 6.43 | 2.23 | 5.1 | 94.9 | 0.0 | -0.64 | 0.51 | 0.78 | 0.78 | 1.09 | 15069 | 1950 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 8R22 | 18833 | 2024-12-31 | 2023-11-02 | 3.9 | 3.57 | 3.81 | 3.6 | 0.004 | 0.67 | 0.0 | 0.04 | 14.65 | 0.01 | 2.098 | 10.00 | 0.00 | 9.3 | 90.7 | 0.0 | -4.23 | 0.79 | 0.79 | 1.68 | 3.7 | 0.003 | 0.63 | 0.0 | 0.04 | 16.25 | 0.00 | 2.144 | 6.43 | 2.23 | 5.1 | 94.9 | 0.0 | -0.64 | 0.51 | 0.78 | 0.78 | 1.09 | 15069 | 1950 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 8R22 | 18833 | 2025-01-20 | 2023-11-02 | 3.9 | 3.57 | 3.81 | 3.6 | 0.004 | 0.67 | 0.0 | 0.04 | 14.65 | 0.01 | 2.098 | 10.00 | 0.00 | 9.3 | 90.7 | 0.0 | -4.23 | 0.79 | 0.79 | 1.68 | 3.7 | 0.002 | 0.61 | 0.0 | 0.04 | 16.15 | 0.00 | 2.137 | 6.20 | 2.23 | 5.7 | 94.3 | 0.0 | -0.66 | 0.49 | 0.78 | 0.78 | 1.09 | 15069 | 1950 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 8R22 | 18833 | 2024-09-27 | 2023-11-02 | 3.9 | 3.57 | 3.81 | 3.6 | 0.004 | 0.67 | 0.0 | 0.04 | 14.65 | 0.01 | 2.098 | 10.00 | 0.00 | 9.3 | 90.7 | 0.0 | -4.23 | 0.79 | 0.79 | 1.68 | 3.7 | 0.003 | 0.63 | 0.0 | 0.04 | 16.25 | 0.00 | 2.144 | 6.43 | 2.23 | 5.1 | 94.9 | 0.0 | -0.64 | 0.51 | 0.78 | 0.78 | 1.09 | 15069 | 1950 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 8R22 | 18833 | 2024-08-06 | 2023-11-02 | 3.9 | 3.57 | 3.81 | 3.6 | 0.004 | 0.67 | 0.0 | 0.04 | 14.65 | 0.01 | 2.098 | 10.00 | 0.00 | 9.3 | 90.7 | 0.0 | -4.23 | 0.79 | 0.79 | 1.68 | 3.7 | 0.003 | 0.63 | 0.0 | 0.04 | 16.25 | 0.00 | 2.144 | 6.43 | 2.23 | 5.1 | 94.9 | 0.0 | -0.64 | 0.51 | 0.78 | 0.78 | 1.09 | 15069 | 1950 | 5 | 0 | 1 | 0 | 0 | logfile |
✔ | 8UUX | 42600 | 2024-11-16 | 2023-11-02 | 2.74 | 2.87 | 2.62 | 2.9 | 0.002 | 0.63 | 0.0 | 0.05 | 15.62 | 0.01 | 2.133 | 3.59 | 0.95 | 5.7 | 94.2 | 0.1 | -1.63 | 0.41 | 0.85 | 3.94 | 2.9 | 0.004 | 0.92 | 1.0 | 0.05 | 16.31 | 0.01 | 2.106 | 2.82 | 3.47 | 5.8 | 94.1 | 0.1 | -1.15 | 0.22 | 0.42 | 0.85 | 3.54 | 12084 | 1532 | 9 | 0 | 3 | 310 | 0 | logfile |
✔ | 8UUX | 42600 | 2024-12-30 | 2023-11-02 | 2.74 | 2.87 | 2.62 | 2.9 | 0.002 | 0.63 | 0.0 | 0.05 | 15.62 | 0.01 | 2.133 | 3.59 | 0.95 | 5.7 | 94.2 | 0.1 | -1.63 | 0.41 | 0.85 | 3.94 | 2.9 | 0.004 | 0.92 | 1.0 | 0.05 | 16.31 | 0.01 | 2.106 | 2.82 | 3.47 | 5.8 | 94.1 | 0.1 | -1.15 | 0.22 | 0.42 | 0.85 | 3.54 | 12084 | 1532 | 9 | 0 | 3 | 310 | 0 | logfile |
✔ | 8UUX | 42600 | 2024-10-12 | 2023-11-02 | 2.74 | 2.87 | 2.62 | 2.9 | 0.002 | 0.63 | 0.0 | 0.05 | 15.62 | 0.01 | 2.133 | 3.59 | 0.95 | 5.7 | 94.2 | 0.1 | -1.63 | 0.41 | 0.85 | 3.94 | 2.9 | 0.004 | 0.92 | 1.0 | 0.05 | 16.31 | 0.01 | 2.106 | 2.82 | 3.47 | 5.8 | 94.1 | 0.1 | -1.15 | 0.22 | 0.42 | 0.85 | 3.54 | 12084 | 1532 | 9 | 0 | 3 | 310 | 0 | logfile |
✔ | 8UUX | 42600 | 2024-09-26 | 2023-11-02 | 2.74 | 2.87 | 2.62 | 2.9 | 0.002 | 0.63 | 0.0 | 0.05 | 15.62 | 0.01 | 2.133 | 3.59 | 0.95 | 5.7 | 94.2 | 0.1 | -1.63 | 0.41 | 0.85 | 3.94 | 2.9 | 0.004 | 0.92 | 1.0 | 0.05 | 16.31 | 0.01 | 2.106 | 2.82 | 3.47 | 5.8 | 94.1 | 0.1 | -1.15 | 0.22 | 0.42 | 0.85 | 3.54 | 12084 | 1532 | 9 | 0 | 3 | 310 | 0 | logfile |
✔ | 8R1F | 18809 | 2024-08-06 | 2023-11-01 | 3.67 | 3.92 | 3.69 | 3.9 | 0.008 | 0.98 | 0.0 | 0.07 | 11.49 | 0.02 | 2.496 | 0.36 | 0.21 | 2.3 | 97.7 | 0.0 | -0.70 | 0.58 | 0.53 | 1.69 | 3.9 | 0.003 | 0.58 | 0.0 | 0.04 | 15.02 | 0.00 | 2.163 | 5.17 | 1.49 | 2.9 | 97.1 | 0.0 | 1.19 | 2.08 | 0.70 | 0.68 | 1.26 | 16629 | 1025 | 5 | 0 | 3 | 0 | 8263 | logfile |
✔ | 8R1F | 18809 | 2024-07-22 | 2023-11-01 | 3.67 | 3.92 | 3.69 | 3.9 | 0.008 | 0.98 | 0.0 | 0.07 | 11.49 | 0.02 | 2.496 | 0.36 | 0.21 | 2.3 | 97.7 | 0.0 | -0.70 | 0.58 | 0.53 | 1.69 | 3.9 | 0.003 | 0.59 | 0.0 | 0.04 | 14.98 | 0.00 | 1.854 | 8.66 | 1.70 | 3.5 | 96.5 | 0.0 | 0.78 | 1.64 | 0.70 | 0.69 | 1.27 | 16629 | 1025 | 5 | 0 | 3 | 0 | 8263 | logfile |
✔ | 8R1F | 18809 | 2024-06-28 | 2023-11-01 | 3.67 | 3.92 | 3.69 | 3.9 | 0.008 | 0.98 | 0.0 | 0.07 | 11.49 | 0.02 | 2.496 | 0.36 | 0.21 | 2.3 | 97.7 | 0.0 | -0.70 | 0.58 | 0.53 | 1.69 | 3.9 | 0.003 | 0.59 | 0.0 | 0.04 | 14.98 | 0.00 | 1.854 | 8.66 | 1.70 | 3.5 | 96.5 | 0.0 | 0.78 | 1.64 | 0.70 | 0.69 | 1.27 | 16629 | 1025 | 5 | 0 | 3 | 0 | 8263 | logfile |
✔ | 8R1F | 18809 | 2024-02-16 | 2023-11-01 | 3.67 | 3.92 | 3.69 | 3.9 | 0.008 | 0.98 | 0.0 | 0.07 | 11.49 | 0.02 | 2.496 | 0.36 | 0.21 | 2.3 | 97.7 | 0.0 | -0.70 | 0.58 | 0.53 | 1.69 | 3.9 | 0.003 | 0.59 | 0.0 | 0.04 | 14.98 | 0.00 | 1.854 | 8.66 | 1.70 | 3.5 | 96.5 | 0.0 | 0.78 | 1.64 | 0.70 | 0.69 | 1.27 | 16629 | 1025 | 5 | 0 | 3 | 0 | 8263 | logfile |