Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8RoY	19407	2025-02-12	2024-01-12	3.1	4.02	3.16	3.8	0.003	0.56	0.0	0.04	14.45	0.02	2.346	2.23	0.40	4.8	95.2	0.0	-1.39	0.78	0.81	3.13	3.8	0.006	0.67	0.0	0.04	15.03	0.00	2.471	6.44	4.82	5.3	94.6	0.1	-0.87	1.02	0.79	0.83	2.67	8294	1174	4	0	1	0	0	logfile
✘	8VLX	43347	2024-11-20	2024-01-12	2.6	3.36	2.70	3.2	0.004	0.61	0.0	0.04	18.29	0.00	2.160	7.29	3.73	2.4	97.6	0.0	0.86	0.80	0.86	2.91	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	21239	2710	3	0	1	0	0	logfile
✔	8VLX	43347	2024-09-29	2024-01-12	2.6	3.36	2.70	3.2	0.004	0.61	0.0	0.04	18.29	0.00	2.160	7.29	3.73	2.4	97.6	0.0	0.86	0.80	0.86	2.91	3.2	0.003	0.66	0.0	0.04	18.10	0.00	2.422	6.64	2.37	2.5	97.5	0.0	2.36	0.42	0.79	0.85	2.24	21239	2710	3	0	1	0	0	logfile
✔	8VLX	43347	2025-01-24	2024-01-12	2.6	3.36	2.70	3.2	0.004	0.61	0.0	0.04	18.29	0.00	2.160	7.29	3.73	2.4	97.6	0.0	0.86	0.80	0.86	2.91	3.2	0.005	0.68	0.0	0.04	18.08	0.00	2.388	6.62	2.54	2.8	97.2	0.0	2.20	0.42	0.80	0.85	2.49	21239	2710	3	0	1	0	0	logfile
✔	8VLX	43347	2024-08-08	2024-01-12	2.6	3.36	2.70	3.2	0.004	0.61	0.0	0.04	18.29	0.00	2.160	7.29	3.73	2.4	97.6	0.0	0.86	0.80	0.86	2.91	3.2	0.003	0.66	0.0	0.04	18.10	0.00	2.422	6.64	2.37	2.5	97.5	0.0	2.36	0.42	0.79	0.85	2.24	21239	2710	3	0	1	0	0	logfile
✔	8RoX	19406	2025-04-28	2024-01-12	3.3	4.29	3.45	4.0	0.008	1.02	0.0	0.07	12.77	0.01	2.316	2.97	1.59	5.1	94.9	0.0	-1.84	0.80	0.76	2.56	4.0	0.007	0.71	0.0	0.05	13.22	0.00	2.496	6.65	5.96	5.5	94.5	0.0	-0.80	0.89	0.82	0.81	2.82	7249	1134	4	0	1	0	0	logfile
✔	8RoX	19406	2025-01-14	2024-01-12	3.3	4.29	3.46	4.0	0.008	1.02	0.0	0.07	12.77	0.01	2.316	2.97	1.59	5.1	94.9	0.0	-1.84	0.80	0.76	2.56	4.0	0.005	0.66	0.0	0.04	13.35	0.00	2.480	5.56	5.77	4.9	95.1	0.0	-0.68	1.58	0.82	0.80	2.73	7249	1134	4	0	1	0	0	logfile
✔	8RoX	19406	2025-02-12	2024-01-12	3.3	4.29	3.46	4.0	0.008	1.02	0.0	0.07	12.77	0.01	2.316	2.97	1.59	5.1	94.9	0.0	-1.84	0.80	0.76	2.56	4.0	0.005	0.66	0.0	0.04	13.35	0.00	2.480	5.56	5.77	4.9	95.1	0.0	-0.68	1.58	0.82	0.80	2.73	7249	1134	4	0	1	0	0	logfile
✔	8RoX	19406	2025-03-12	2024-01-12	3.3	4.29	3.45	4.0	0.008	1.02	0.0	0.07	12.77	0.01	2.316	2.97	1.59	5.1	94.9	0.0	-1.84	0.80	0.76	2.56	4.0	0.007	0.71	0.0	0.05	13.22	0.00	2.496	6.65	5.96	5.5	94.5	0.0	-0.80	0.89	0.82	0.81	2.82	7249	1134	4	0	1	0	0	logfile
✔	8XTS	38649	2025-05-17	2024-01-11	2.54	2.70	2.59	2.7	0.003	0.65	0.0	0.05	25.93	0.00	2.030	1.47	0.00	0.0	0.0	0.0	—	0.75	0.82	—	2.7	0.011	1.06	0.0	0.05	25.77	0.01	1.993	4.64	0.00	0.0	0.0	0.0	—	1.01	0.77	0.87	—	15794	0	2	732	44	0	0	logfile
✔	8RNU	19395	2024-11-16	2024-01-11	3.4	5.41	2.49	3.9	0.010	1.04	0.0	0.05	17.19	0.01	2.104	28.22	0.32	10.1	89.9	0.0	-2.17	0.62	0.30	0.31	3.9	0.004	0.78	0.0	0.05	17.94	0.01	2.398	25.78	3.69	10.5	89.5	0.0	-2.30	0.67	0.63	0.33	0.49	10848	1320	12	0	0	0	0	logfile
✔	8RNU	19395	2024-12-29	2024-01-11	3.4	5.41	2.49	3.9	0.010	1.04	0.0	0.05	17.19	0.01	2.104	28.22	0.32	10.1	89.9	0.0	-2.17	0.62	0.30	0.31	3.9	0.004	0.78	0.0	0.05	17.94	0.01	2.398	25.78	3.69	10.5	89.5	0.0	-2.30	0.67	0.63	0.33	0.49	10848	1320	12	0	0	0	0	logfile
✔	8XTQ	38647	2025-05-17	2024-01-11	2.96	3.13	3.02	3.1	0.003	0.59	0.0	0.05	25.41	0.00	1.795	1.24	0.00	0.0	0.0	0.0	—	0.80	0.79	—	3.0	0.008	0.78	0.0	0.04	25.38	0.01	1.964	4.55	0.00	0.0	0.0	0.0	—	1.84	0.84	0.84	—	16087	0	2	746	37	0	0	logfile
✔	8RNU	19395	2024-09-25	2024-01-11	3.4	5.41	2.49	3.9	0.010	1.04	0.0	0.05	17.19	0.01	2.104	28.22	0.32	10.1	89.9	0.0	-2.17	0.62	0.30	0.31	3.9	0.004	0.78	0.0	0.05	17.94	0.01	2.398	25.78	3.69	10.5	89.5	0.0	-2.30	0.67	0.63	0.33	0.49	10848	1320	12	0	0	0	0	logfile
✔	8RNU	19395	2025-01-17	2024-01-11	3.4	5.41	2.49	3.9	0.010	1.04	0.0	0.05	17.19	0.01	2.104	28.22	0.32	10.1	89.9	0.0	-2.17	0.62	0.30	0.31	3.9	0.004	0.77	0.0	0.05	17.91	0.01	2.426	24.31	3.45	10.2	89.8	0.0	-2.07	0.65	0.65	0.39	0.44	10848	1320	12	0	0	0	0	logfile
✔	8RNU	19395	2025-05-13	2024-01-11	3.4	5.41	2.48	3.9	0.010	1.04	0.0	0.05	17.19	0.01	2.104	28.22	0.32	10.1	89.9	0.0	-2.17	0.62	0.30	0.31	3.9	0.004	0.78	0.0	0.05	17.90	0.01	2.408	25.97	3.85	10.2	89.8	0.0	-2.27	0.67	0.66	0.39	0.25	10848	1320	12	0	0	0	0	logfile
✔	8RNU	19395	2024-08-04	2024-01-11	3.4	5.41	2.49	3.9	0.010	1.04	0.0	0.05	17.19	0.01	2.104	28.22	0.32	10.1	89.9	0.0	-2.17	0.62	0.30	0.31	3.9	0.004	0.78	0.0	0.05	17.94	0.01	2.398	25.78	3.69	10.5	89.5	0.0	-2.30	0.67	0.63	0.33	0.49	10848	1320	12	0	0	0	0	logfile
✔	8RNU	19395	2025-02-14	2024-01-11	3.4	5.41	2.49	3.9	0.010	1.04	0.0	0.05	17.19	0.01	2.104	28.22	0.32	10.1	89.9	0.0	-2.17	0.62	0.30	0.31	3.9	0.004	0.77	0.0	0.05	17.91	0.01	2.426	24.31	3.45	10.2	89.8	0.0	-2.07	0.65	0.65	0.39	0.44	10848	1320	12	0	0	0	0	logfile
✔	8RNU	19395	2024-10-11	2024-01-11	3.4	5.41	2.49	3.9	0.010	1.04	0.0	0.05	17.19	0.01	2.104	28.22	0.32	10.1	89.9	0.0	-2.17	0.62	0.30	0.31	3.9	0.004	0.78	0.0	0.05	17.94	0.01	2.398	25.78	3.69	10.5	89.5	0.0	-2.30	0.67	0.63	0.33	0.49	10848	1320	12	0	0	0	0	logfile
✔	8XTR	38648	2025-05-17	2024-01-11	2.67	2.90	2.80	2.9	0.005	0.82	0.0	0.08	26.15	0.00	2.037	2.71	0.00	0.0	0.0	0.0	—	0.68	0.70	—	2.9	0.007	0.83	0.0	0.04	25.67	0.01	1.732	4.71	0.00	0.0	0.0	0.0	—	1.27	0.77	0.86	—	15952	0	4	740	36	0	0	logfile

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