Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8XTQ	38647	2025-05-17	2024-01-11	2.96	3.13	3.02	3.1	0.003	0.59	0.0	0.05	25.41	0.00	1.795	1.24	0.00	0.0	0.0	0.0	—	0.80	0.79	—	3.0	0.008	0.78	0.0	0.04	25.38	0.01	1.964	4.55	0.00	0.0	0.0	0.0	—	1.84	0.84	0.84	—	16087	0	2	746	37	0	0	logfile
✔	8XT9	38641	2025-04-27	2024-01-10	3.1	3.69	2.94	3.5	0.010	1.32	5.0	0.08	17.17	0.01	2.268	4.41	6.04	6.0	93.4	0.6	-0.55	0.68	0.80	2.69	3.5	0.003	0.66	0.0	0.04	16.94	0.00	2.542	6.66	4.21	4.8	95.2	0.0	0.31	1.16	0.70	0.83	2.56	6479	842	2	0	0	0	0	logfile
✔	8XT9	38641	2025-02-11	2024-01-10	3.1	3.69	2.95	3.5	0.007	1.30	5.0	0.08	17.17	0.01	2.268	4.41	6.04	6.0	93.4	0.6	-0.55	0.68	0.80	2.69	3.5	0.003	0.66	0.0	0.04	16.96	0.00	2.510	6.81	4.63	4.1	95.9	0.0	0.35	1.16	0.70	0.83	2.47	6479	842	2	0	0	0	0	logfile
✔	8XT9	38641	2025-03-11	2024-01-10	3.1	3.69	2.94	3.5	0.007	1.30	5.0	0.08	17.17	0.01	2.268	4.41	6.04	6.0	93.4	0.6	-0.55	0.68	0.80	2.69	3.5	0.003	0.66	0.0	0.04	16.94	0.00	2.542	6.66	4.21	4.8	95.2	0.0	0.31	1.16	0.70	0.83	2.56	6479	842	2	0	0	0	0	logfile
✔	8XT9	38641	2025-05-10	2024-01-10	3.1	3.69	2.94	3.5	0.010	1.32	5.0	0.08	17.17	0.01	2.268	4.41	6.04	6.0	93.4	0.6	-0.55	0.68	0.80	2.69	3.5	0.003	0.66	0.0	0.04	16.96	0.00	2.510	6.81	4.63	4.1	95.9	0.0	0.35	1.16	0.70	0.83	2.47	6479	842	2	0	0	0	0	logfile
✔	8XSM	38622	2025-03-05	2024-01-09	3.01	3.31	3.04	3.3	0.008	0.93	0.0	0.05	13.81	0.01	2.161	5.27	1.40	3.8	96.2	0.0	-1.76	0.54	0.81	2.53	3.3	0.003	0.57	0.0	0.04	14.52	0.00	2.653	3.16	2.10	1.9	98.1	0.0	2.40	0.90	0.55	0.82	2.10	2788	375	2	0	2	0	0	logfile
✔	8VKH	43316	2025-01-25	2024-01-09	3.63	4.23	3.83	4.0	0.006	1.11	0.0	0.06	13.87	0.01	2.321	2.10	0.16	3.0	97.0	0.0	-1.79	0.79	0.84	1.86	3.9	0.003	0.66	0.0	0.04	15.08	0.00	2.218	6.83	0.89	3.1	96.9	0.0	0.66	0.53	0.80	0.86	1.65	23287	2949	16	0	20	0	0	logfile
✔	8VKH	43316	2025-05-22	2024-01-09	3.63	4.23	3.82	4.0	0.006	1.11	0.0	0.06	13.87	0.01	2.321	2.10	0.16	3.0	97.0	0.0	-1.79	0.79	0.84	1.86	3.9	0.003	0.66	0.0	0.04	15.08	0.00	2.218	6.83	0.89	3.1	96.9	0.0	0.66	0.53	0.80	0.86	1.65	23287	2949	16	0	20	0	0	logfile
✔	8XSM	38622	2025-04-26	2024-01-09	3.01	3.31	3.04	3.3	0.008	0.93	0.0	0.05	13.81	0.01	2.161	5.27	1.40	3.8	96.2	0.0	-1.76	0.54	0.81	2.53	3.3	0.003	0.57	0.0	0.04	14.52	0.00	2.653	3.16	2.10	1.9	98.1	0.0	2.40	0.90	0.55	0.82	2.10	2788	375	2	0	2	0	0	logfile
✘	8XSM	38622	2025-02-10	2024-01-09	3.01	3.31	3.04	3.3	0.008	0.93	0.0	0.05	13.81	0.01	2.161	5.27	1.40	3.8	96.2	0.0	-1.76	0.54	0.81	2.53	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	2788	375	2	0	2	0	0	logfile
✔	8VKJ	43319	2024-10-10	2024-01-09	2.92	3.19	2.94	3.2	0.005	0.63	0.0	0.04	16.09	0.01	2.201	9.71	0.34	4.5	95.4	0.1	0.61	0.62	0.86	4.03	3.2	0.003	0.56	0.0	0.04	15.58	0.00	2.513	7.72	1.60	4.0	95.9	0.1	0.81	0.84	0.65	0.87	3.39	8622	1089	5	0	9	0	0	logfile
✔	8RN1	19383	2025-05-30	2024-01-09	3.64	3.91	3.77	3.8	0.003	0.53	0.0	0.04	16.64	0.00	1.933	10.27	0.34	4.5	95.5	0.0	0.30	0.72	0.80	1.57	3.8	0.003	0.54	0.0	0.04	16.91	0.00	2.401	6.84	1.69	4.5	95.5	0.0	0.40	0.47	0.72	0.81	1.49	32902	2037	4	12	0	0	16438	logfile
✔	8VKJ	43319	2024-11-15	2024-01-09	2.92	3.19	2.94	3.2	0.005	0.63	0.0	0.04	16.09	0.01	2.201	9.71	0.34	4.5	95.4	0.1	0.61	0.62	0.86	4.03	3.2	0.003	0.56	0.0	0.04	15.58	0.00	2.513	7.72	1.60	4.0	95.9	0.1	0.81	0.84	0.65	0.87	3.39	8622	1089	5	0	9	0	0	logfile
✔	8VKJ	43319	2024-12-28	2024-01-09	2.92	3.19	2.94	3.2	0.005	0.63	0.0	0.04	16.09	0.01	2.201	9.71	0.34	4.5	95.4	0.1	0.61	0.62	0.86	4.03	3.2	0.003	0.56	0.0	0.04	15.58	0.00	2.513	7.72	1.60	4.0	95.9	0.1	0.81	0.84	0.65	0.87	3.39	8622	1089	5	0	9	0	0	logfile
✔	8XSi	38619	2025-03-06	2024-01-09	2.1	2.13	2.10	1.9	0.003	0.60	0.0	0.05	12.12	0.00	2.136	4.88	0.55	6.4	93.4	0.2	-0.70	0.80	0.79	4.65	1.9	0.004	0.67	0.0	0.05	14.20	0.00	2.536	4.27	1.37	5.9	93.9	0.2	-0.93	0.90	0.84	0.82	4.65	3354	429	4	0	1	0	0	logfile
✔	8XSi	38619	2025-01-14	2024-01-09	2.1	2.13	2.10	1.9	0.003	0.60	0.0	0.05	12.12	0.00	2.136	4.88	0.55	6.4	93.4	0.2	-0.70	0.80	0.79	4.65	1.9	0.003	0.62	0.0	0.05	13.83	0.00	2.541	3.66	1.92	5.9	93.9	0.2	-0.76	0.89	0.83	0.82	4.65	3354	429	4	0	1	0	0	logfile
✔	8XSi	38619	2025-04-27	2024-01-09	2.1	2.13	2.10	1.9	0.003	0.61	0.0	0.05	12.12	0.00	2.136	4.88	0.55	6.4	93.4	0.2	-0.70	0.80	0.79	4.65	1.9	0.004	0.69	0.0	0.05	13.90	0.00	2.534	4.27	1.92	6.4	93.4	0.2	-0.89	0.90	0.84	0.82	4.58	3354	429	4	0	1	0	0	logfile
✔	8XSi	38619	2025-05-10	2024-01-09	2.1	2.13	2.10	1.9	0.003	0.61	0.0	0.05	12.12	0.00	2.136	4.88	0.55	6.4	93.4	0.2	-0.70	0.80	0.79	4.65	1.9	0.007	0.76	0.0	0.05	14.03	0.01	2.541	4.42	1.65	6.6	93.1	0.2	-0.99	0.90	0.84	0.83	4.55	3354	429	4	0	1	0	0	logfile
✔	8XSi	38619	2024-08-02	2024-01-09	2.1	2.13	2.10	1.9	0.003	0.60	0.0	0.05	12.12	0.00	2.136	4.88	0.55	6.4	93.4	0.2	-0.70	0.80	0.79	4.65	1.9	0.003	0.61	0.0	0.05	14.17	0.00	2.536	3.66	2.20	5.9	93.9	0.2	-0.85	0.89	0.83	0.82	4.68	3354	429	4	0	1	0	0	logfile
✔	8XSi	38619	2024-09-23	2024-01-09	2.1	2.13	2.10	1.9	0.003	0.60	0.0	0.05	12.12	0.00	2.136	4.88	0.55	6.4	93.4	0.2	-0.70	0.80	0.79	4.65	1.9	0.003	0.61	0.0	0.05	14.17	0.00	2.536	3.66	2.20	5.9	93.9	0.2	-0.85	0.89	0.83	0.82	4.68	3354	429	4	0	1	0	0	logfile

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