Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8XS3	38613	2025-04-27	2024-01-08	3.46	4.59	3.46	3.9	0.005	0.78	0.0	0.05	13.19	0.02	2.090	16.27	0.00	5.0	95.0	0.0	-3.00	0.91	0.83	2.30	3.9	0.004	0.69	0.0	0.04	14.81	0.00	2.496	12.45	2.13	4.0	96.0	0.0	-0.75	1.07	0.91	0.84	2.31	4118	535	5	0	3	0	0	logfile
✔	8XS3	38613	2025-03-06	2024-01-08	3.46	4.59	3.46	3.9	0.005	0.77	0.0	0.05	13.19	0.02	2.090	16.27	0.00	5.0	95.0	0.0	-3.00	0.91	0.83	2.30	3.9	0.004	0.69	0.0	0.04	14.81	0.00	2.496	12.45	2.13	4.0	96.0	0.0	-0.75	1.07	0.91	0.84	2.31	4118	535	5	0	3	0	0	logfile
✔	8XS3	38613	2025-01-13	2024-01-08	3.46	4.59	3.46	3.9	0.005	0.77	0.0	0.05	13.19	0.02	2.090	16.27	0.00	5.0	95.0	0.0	-3.00	0.91	0.83	2.30	3.9	0.003	0.67	0.0	0.04	14.73	0.00	2.499	10.48	1.71	3.6	96.4	0.0	-0.77	1.07	0.91	0.84	2.37	4118	535	5	0	3	0	0	logfile
✔	8XS3	38613	2024-09-23	2024-01-08	3.46	4.59	3.46	3.9	0.005	0.77	0.0	0.05	13.19	0.02	2.090	16.27	0.00	5.0	95.0	0.0	-3.00	0.91	0.83	2.30	3.9	0.003	0.65	0.0	0.04	14.55	0.00	2.488	10.11	1.49	3.5	96.5	0.0	-0.56	1.08	0.91	0.84	2.48	4118	535	5	0	3	0	0	logfile
✔	8XS3	38613	2024-10-09	2024-01-08	3.46	4.59	3.46	3.9	0.005	0.77	0.0	0.05	13.19	0.02	2.090	16.27	0.00	5.0	95.0	0.0	-3.00	0.91	0.83	2.30	3.9	0.003	0.65	0.0	0.04	14.55	0.00	2.488	10.11	1.49	3.5	96.5	0.0	-0.56	1.08	0.91	0.84	2.48	4118	535	5	0	3	0	0	logfile
✔	8XS3	38613	2024-11-14	2024-01-08	3.46	4.59	3.46	3.9	0.005	0.77	0.0	0.05	13.19	0.02	2.090	16.27	0.00	5.0	95.0	0.0	-3.00	0.91	0.83	2.30	3.9	0.003	0.65	0.0	0.04	14.55	0.00	2.488	10.11	1.49	3.5	96.5	0.0	-0.56	1.08	0.91	0.84	2.48	4118	535	5	0	3	0	0	logfile
✔	8XS3	38613	2024-12-27	2024-01-08	3.46	4.59	3.46	3.9	0.005	0.77	0.0	0.05	13.19	0.02	2.090	16.27	0.00	5.0	95.0	0.0	-3.00	0.91	0.83	2.30	3.9	0.003	0.65	0.0	0.04	14.55	0.00	2.488	10.11	1.49	3.5	96.5	0.0	-0.56	1.08	0.91	0.84	2.48	4118	535	5	0	3	0	0	logfile
✔	8XS3	38613	2025-02-11	2024-01-08	3.46	4.59	3.46	3.9	0.005	0.77	0.0	0.05	13.19	0.02	2.090	16.27	0.00	5.0	95.0	0.0	-3.00	0.91	0.83	2.30	3.9	0.003	0.67	0.0	0.04	14.73	0.00	2.499	10.48	1.71	3.6	96.4	0.0	-0.77	1.07	0.91	0.84	2.37	4118	535	5	0	3	0	0	logfile
✔	8RMM	19364	2025-05-29	2024-01-08	3.26	3.54	3.38	3.4	0.003	0.67	0.0	0.04	14.99	0.00	2.123	11.42	0.79	4.0	96.0	0.0	0.62	0.64	0.75	2.03	3.4	0.003	0.61	0.0	0.04	15.23	0.00	2.368	8.84	2.13	3.5	96.5	0.0	1.67	0.57	0.67	0.82	1.56	32888	4163	27	0	6	0	0	logfile
✔	8RMR	19368	2024-09-28	2024-01-08	3.25	3.58	3.47	3.5	0.002	0.50	0.0	0.04	17.46	0.00	1.921	8.89	0.26	4.2	95.7	0.1	0.21	0.65	0.62	0.85	3.5	0.003	0.57	0.0	0.04	18.00	0.00	1.875	6.43	2.16	4.5	95.4	0.1	0.02	1.26	0.67	0.70	1.13	68466	4273	8	0	1	0	34252	logfile
✔	8RMR	19368	2024-10-14	2024-01-08	3.25	3.58	3.47	3.5	0.002	0.50	0.0	0.04	17.46	0.00	1.921	8.89	0.26	4.2	95.7	0.1	0.21	0.65	0.62	0.85	3.5	0.004	0.73	1.0	0.04	18.11	0.00	1.730	9.25	2.82	5.1	94.9	0.1	-0.46	1.26	0.67	0.70	1.19	68466	4273	8	0	1	0	34252	logfile
✔	8RMR	19368	2025-01-22	2024-01-08	3.25	3.58	3.47	3.5	0.002	0.50	0.0	0.04	17.46	0.00	1.921	8.89	0.26	4.2	95.7	0.1	0.21	0.65	0.62	0.85	3.5	0.003	0.57	0.0	0.04	17.96	0.00	1.858	6.82	2.37	4.7	95.2	0.1	-0.08	1.25	0.67	0.70	1.12	68466	4273	8	0	1	0	34252	logfile
✔	8RMS	19369	2025-05-29	2024-01-08	3.21	3.49	3.37	3.4	0.002	0.51	0.0	0.04	17.53	0.00	1.943	8.63	0.22	3.6	96.4	0.0	0.13	0.65	0.69	1.52	3.4	0.004	0.59	0.0	0.04	18.13	0.00	1.793	6.04	2.29	5.8	94.2	0.0	-0.26	0.99	0.65	0.72	1.46	32434	2019	4	0	1	0	16245	logfile
✔	8RMP	19366	2025-05-26	2024-01-08	2.77	3.03	2.91	3.1	0.003	0.51	0.0	0.04	18.56	0.00	1.939	4.49	2.95	2.9	97.0	0.1	1.18	0.59	0.82	2.73	3.0	0.003	0.52	0.0	0.04	18.62	0.00	1.971	3.11	2.62	3.5	96.5	0.0	0.99	0.34	0.60	0.83	2.77	27631	1717	4	0	1	0	13813	logfile
✔	8RMQ	19367	2025-05-25	2024-01-08	2.54	2.68	2.56	2.7	0.003	0.48	0.0	0.04	18.32	0.00	1.888	4.58	2.65	2.6	97.4	0.0	0.93	0.65	0.85	3.59	2.7	0.003	0.53	0.0	0.04	18.31	0.00	2.049	3.15	1.46	2.9	97.0	0.1	0.83	0.29	0.66	0.86	3.69	27317	1698	6	0	2	7	13647	logfile
✔	8VK3	43299	2024-02-28	2024-01-08	3.21	3.09	—	3.0	0.003	0.72	0.0	0.04	14.00	0.00	1.591	6.88	0.05	2.2	97.8	0.0	1.48	0.87	0.86	3.39	3.0	0.005	0.67	0.0	0.04	15.59	0.00	2.072	8.57	1.16	2.5	97.5	0.0	1.46	0.96	0.90	0.90	3.32	148852	18672	20	0	12	0	0	logfile
✔	8RMN	19365	2024-09-25	2024-01-08	3.8	3.72	3.66	3.7	0.004	0.71	0.0	0.04	13.55	0.01	2.133	13.63	1.16	4.4	95.6	0.0	2.54	0.63	0.77	1.15	3.7	0.003	0.63	0.0	0.04	15.40	0.00	2.389	10.73	2.69	4.6	95.4	0.0	2.32	0.90	0.62	0.74	1.16	55440	7100	40	0	0	0	0	logfile
✘	8RMN	19365	2025-01-17	2024-01-08	3.8	3.72	3.66	3.7	0.004	0.71	0.0	0.04	13.55	0.01	2.133	13.63	1.16	4.4	95.6	0.0	2.54	0.63	0.77	1.15	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	55440	7100	40	0	0	0	0	logfile
✔	8RMN	19365	2024-10-11	2024-01-08	3.8	3.72	3.66	3.7	0.004	0.71	0.0	0.04	13.55	0.01	2.133	13.63	1.16	4.4	95.6	0.0	2.54	0.63	0.77	1.15	3.7	0.004	0.69	0.0	0.04	15.34	0.00	2.095	11.72	3.74	4.6	95.4	0.0	2.25	0.88	0.62	0.74	1.17	55440	7100	40	0	0	0	0	logfile
✔	8XS5	38615	2024-08-03	2024-01-08	3.33	3.40	3.21	3.3	0.011	0.88	0.0	0.05	13.49	0.01	2.081	9.41	0.00	6.7	93.2	0.1	-0.34	0.70	0.85	2.61	3.4	0.003	0.61	0.0	0.04	15.40	0.01	2.531	4.53	0.89	5.0	94.9	0.1	1.46	0.42	0.69	0.84	1.72	8705	1088	2	0	0	0	0	logfile

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