Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8YJV	39351	2025-07-28	2024-03-03	3.51	2.76	3.49	3.5	0.007	1.08	0.0	0.06	20.74	0.01	2.317	5.90	0.10	5.0	95.0	0.0	-3.60	0.71	0.75	2.39	3.5	0.003	0.63	0.0	0.04	21.45	0.00	2.540	11.90	1.97	2.8	97.2	0.0	-1.56	0.46	0.72	0.76	2.11	9938	1111	8	65	0	0	0	logfile
✔	9AVi	43902	2025-04-29	2024-03-03	3.02	3.96	3.03	3.7	0.013	1.94	0.0	0.08	14.20	0.01	2.430	9.05	6.29	7.9	92.1	0.0	-5.11	0.80	0.89	2.43	3.7	0.003	0.64	0.0	0.03	15.02	0.00	2.500	4.67	2.17	0.9	99.1	0.0	4.50	0.68	0.75	0.84	1.40	8370	1080	5	0	0	0	0	logfile
✔	9AVi	43902	2025-05-11	2024-03-03	3.02	3.96	3.03	3.7	0.013	1.94	0.0	0.08	14.20	0.01	2.430	9.05	6.29	7.9	92.1	0.0	-5.11	0.80	0.89	2.43	3.7	0.003	0.63	0.0	0.03	15.02	0.00	2.573	4.79	2.17	0.9	99.1	0.0	4.54	0.68	0.76	0.85	1.45	8370	1080	5	0	0	0	0	logfile
✔	9AVi	43902	2025-02-12	2024-03-03	3.02	3.96	3.03	3.7	0.013	1.94	0.0	0.08	14.20	0.01	2.430	9.05	6.29	7.9	92.1	0.0	-5.11	0.80	0.89	2.43	3.7	0.003	0.63	0.0	0.03	15.02	0.00	2.573	4.79	2.17	0.9	99.1	0.0	4.54	0.68	0.76	0.85	1.45	8370	1080	5	0	0	0	0	logfile
✔	9AVi	43902	2025-06-07	2024-03-03	3.02	3.96	3.03	3.7	0.013	1.94	0.0	0.08	14.20	0.01	2.430	9.05	6.29	7.9	92.1	0.0	-5.11	0.80	0.89	2.43	3.7	0.003	0.64	0.0	0.03	15.02	0.00	2.500	4.67	2.17	0.9	99.1	0.0	4.50	0.68	0.75	0.84	1.40	8370	1080	5	0	0	0	0	logfile
✔	9AVi	43902	2025-03-12	2024-03-03	3.02	3.96	3.03	3.7	0.013	1.94	0.0	0.08	14.20	0.01	2.430	9.05	6.29	7.9	92.1	0.0	-5.11	0.80	0.89	2.43	3.7	0.003	0.64	0.0	0.03	15.02	0.00	2.500	4.67	2.17	0.9	99.1	0.0	4.50	0.68	0.75	0.84	1.40	8370	1080	5	0	0	0	0	logfile
✔	9AVi	43902	2025-07-26	2024-03-03	3.02	3.96	3.03	3.7	0.013	1.94	0.0	0.08	14.20	0.01	2.430	9.05	6.29	7.9	92.1	0.0	-5.11	0.80	0.89	2.43	3.7	0.003	0.64	0.0	0.03	15.02	0.00	2.500	4.67	2.17	0.9	99.1	0.0	4.50	0.68	0.75	0.84	1.40	8370	1080	5	0	0	0	0	logfile
✔	8YJP	39345	2025-03-06	2024-03-02	3.09	2.27	3.11	2.1	0.009	1.46	0.0	0.08	22.11	0.01	2.240	15.97	0.00	4.7	95.3	0.0	1.56	0.72	0.69	2.05	2.1	0.003	0.64	0.0	0.04	17.72	0.00	2.468	10.25	2.45	3.4	96.6	0.0	2.45	1.02	0.76	0.76	1.66	4946	596	4	0	13	0	0	logfile
✔	8YJP	39345	2025-02-11	2024-03-02	3.09	2.27	3.09	2.1	0.009	1.46	0.0	0.08	22.11	0.01	2.240	15.97	0.00	4.7	95.3	0.0	1.56	0.72	0.69	2.05	2.1	0.003	0.63	0.0	0.04	17.66	0.00	2.454	9.84	1.84	3.2	96.8	0.0	2.58	1.01	0.75	0.75	1.97	4946	596	4	0	13	0	0	logfile
✔	8YJU	39350	2025-01-17	2024-03-02	3.78	3.49	3.71	3.5	0.005	1.03	0.0	0.06	19.79	0.01	2.324	5.53	0.00	5.1	94.9	0.0	-3.41	0.79	0.77	1.99	3.5	0.005	0.71	0.0	0.05	20.95	0.00	2.395	14.79	2.28	4.9	95.1	0.0	-1.18	0.52	0.82	0.79	2.16	9939	1111	8	65	0	0	0	logfile
✔	8YJU	39350	2025-02-14	2024-03-02	3.78	3.49	3.71	3.5	0.005	1.03	0.0	0.06	19.79	0.01	2.324	5.53	0.00	5.1	94.9	0.0	-3.41	0.79	0.77	1.99	3.5	0.005	0.71	0.0	0.05	20.95	0.00	2.395	14.79	2.28	4.9	95.1	0.0	-1.18	0.52	0.82	0.79	2.16	9939	1111	8	65	0	0	0	logfile
✔	8YJU	39350	2025-05-13	2024-03-02	3.78	3.49	3.67	3.5	0.005	1.03	0.0	0.06	19.79	0.01	2.324	5.53	0.00	5.1	94.9	0.0	-3.41	0.79	0.77	1.99	3.5	0.004	0.70	0.0	0.04	20.76	0.00	2.423	13.18	1.66	4.0	96.0	0.0	-1.01	0.50	0.81	0.78	2.18	9939	1111	8	65	0	0	0	logfile
✔	8YJU	39350	2025-06-09	2024-03-02	3.78	3.49	3.67	3.5	0.005	1.03	0.0	0.06	19.79	0.01	2.324	5.53	0.00	5.1	94.9	0.0	-3.41	0.79	0.77	1.99	3.5	0.004	0.70	0.0	0.04	20.76	0.00	2.423	13.18	1.66	4.0	96.0	0.0	-1.01	0.50	0.81	0.78	2.18	9939	1111	8	65	0	0	0	logfile
✔	8YJU	39350	2025-07-28	2024-03-02	3.78	3.49	3.67	3.5	0.005	1.03	0.0	0.06	19.79	0.01	2.324	5.53	0.00	5.1	94.9	0.0	-3.41	0.79	0.77	1.99	3.5	0.004	0.70	0.0	0.04	20.76	0.00	2.423	13.18	1.66	4.0	96.0	0.0	-1.01	0.50	0.81	0.78	2.18	9939	1111	8	65	0	0	0	logfile
✔	8YJP	39345	2025-07-24	2024-03-02	3.09	2.27	3.11	2.1	0.011	1.47	0.0	0.08	22.11	0.01	2.240	15.97	0.00	4.7	95.3	0.0	1.56	0.72	0.69	2.05	2.1	0.003	0.66	0.0	0.04	17.60	0.00	2.459	10.25	1.63	3.0	97.0	0.0	2.54	1.02	0.75	0.75	1.61	4946	596	4	0	13	0	0	logfile
✔	8YJP	39345	2025-06-05	2024-03-02	3.09	2.27	3.11	2.1	0.011	1.47	0.0	0.08	22.11	0.01	2.240	15.97	0.00	4.7	95.3	0.0	1.56	0.72	0.69	2.05	2.1	0.003	0.66	0.0	0.04	17.60	0.00	2.459	10.25	1.63	3.0	97.0	0.0	2.54	1.02	0.75	0.75	1.61	4946	596	4	0	13	0	0	logfile
✔	8YJU	39350	2024-12-29	2024-03-02	3.78	3.49	3.71	3.5	0.005	1.03	0.0	0.06	19.79	0.01	2.324	5.53	0.00	5.1	94.9	0.0	-3.41	0.79	0.77	1.99	3.7	0.003	0.65	0.0	0.04	20.78	0.00	2.429	12.15	1.87	3.4	96.6	0.0	-0.81	0.50	0.81	0.78	2.13	9939	1111	8	65	0	0	0	logfile
✔	8YJP	39345	2025-05-10	2024-03-02	3.09	2.27	3.11	2.1	0.011	1.47	0.0	0.08	22.11	0.01	2.240	15.97	0.00	4.7	95.3	0.0	1.56	0.72	0.69	2.05	2.1	0.003	0.63	0.0	0.04	17.66	0.00	2.454	9.84	1.84	3.2	96.8	0.0	2.58	1.01	0.75	0.75	1.97	4946	596	4	0	13	0	0	logfile
✔	8YJP	39345	2025-04-27	2024-03-02	3.09	2.27	3.11	2.1	0.011	1.47	0.0	0.08	22.11	0.01	2.240	15.97	0.00	4.7	95.3	0.0	1.56	0.72	0.69	2.05	2.1	0.003	0.66	0.0	0.04	17.60	0.00	2.459	10.25	1.63	3.0	97.0	0.0	2.54	1.02	0.75	0.75	1.61	4946	596	4	0	13	0	0	logfile
✔	9AVG	43901	2025-06-15	2024-03-02	3.6	2.11	—	1.8	0.005	0.70	0.0	0.04	12.94	0.01	2.112	8.93	0.00	3.2	96.8	0.0	-0.83	0.76	0.75	2.80	1.8	0.004	0.61	0.0	0.04	14.81	0.00	2.352	7.51	1.78	3.0	97.0	0.0	-0.24	0.37	0.76	0.75	2.42	17498	2210	13	0	25	0	0	logfile

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