Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✘	8RKV	19284	2024-11-18	2023-12-30	3.11	3.27	3.12	3.2	0.006	0.95	0.0	0.06	22.22	0.01	2.013	5.40	1.94	6.0	94.0	0.0	-1.75	0.59	0.67	2.07	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	16466	1600	12	176	2	0	0	logfile
✘	8RKV	19284	2024-10-14	2023-12-30	3.11	3.27	3.12	3.2	0.006	0.95	0.0	0.06	22.22	0.01	2.013	5.40	1.94	6.0	94.0	0.0	-1.75	0.59	0.67	2.07	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	16466	1600	12	176	2	0	0	logfile
✔	8VH1	43231	2025-01-14	2023-12-30	4.08	4.34	4.10	4.2	0.016	0.96	0.0	0.05	13.54	0.01	1.998	9.24	0.04	10.6	89.1	0.3	-2.16	0.75	0.77	—	4.2	0.005	0.67	0.0	0.04	13.93	0.00	2.313	7.45	0.00	11.6	88.2	0.2	-1.95	0.45	0.77	0.78	—	46047	2988	12	0	0	0	22827	logfile
✔	8VH1	43231	2024-12-27	2023-12-30	4.08	4.34	4.10	4.2	0.016	0.96	0.0	0.05	13.54	0.01	1.998	9.24	0.04	10.6	89.1	0.3	-2.16	0.75	0.77	—	4.2	0.004	0.63	0.0	0.04	13.95	0.00	2.371	6.74	0.00	9.8	90.0	0.2	-1.97	0.46	0.77	0.78	—	46047	2988	12	0	0	0	22827	logfile
✔	8Xo0	38521	2025-05-30	2023-12-30	4.2	4.58	4.42	4.2	0.020	2.16	65.0	0.13	12.57	0.01	1.702	41.36	0.28	5.6	94.4	0.0	-2.09	0.62	0.57	—	4.2	0.005	1.16	0.0	0.05	13.49	0.01	2.294	21.83	0.06	5.4	94.6	0.0	-0.50	1.72	0.70	0.79	—	33729	4185	31	0	14	0	0	logfile
✔	8VH2	43232	2024-12-28	2023-12-30	4.31	4.52	4.30	4.5	0.003	0.64	0.0	0.04	13.28	0.00	1.953	5.69	0.00	7.8	92.0	0.2	-1.98	0.64	0.66	—	4.4	0.004	0.64	0.0	0.04	13.65	0.00	2.235	7.49	0.00	8.7	91.1	0.2	-1.93	1.26	0.67	0.73	—	46227	2988	12	0	0	0	22914	logfile
✔	8VH3	43233	2025-05-25	2023-12-30	3.9	3.87	3.54	4.0	0.003	0.60	0.0	0.04	13.41	0.00	2.464	1.96	0.00	4.4	95.6	0.0	-1.58	0.67	0.75	2.22	4.0	0.003	0.53	0.0	0.04	15.35	0.00	2.312	3.78	1.05	5.5	94.5	0.0	-1.23	1.75	0.68	0.77	2.11	27012	1716	6	0	0	0	13440	logfile
✔	8VH2	43232	2025-01-15	2023-12-30	4.31	4.52	4.30	4.5	0.003	0.64	0.0	0.04	13.28	0.00	1.953	5.69	0.00	7.8	92.0	0.2	-1.98	0.64	0.66	—	4.4	0.003	0.64	0.0	0.04	13.73	0.00	2.264	7.25	0.04	7.5	92.3	0.2	-2.08	1.27	0.67	0.72	—	46227	2988	12	0	0	0	22914	logfile
✔	8VH2	43232	2024-10-10	2023-12-30	4.31	4.52	4.30	4.5	0.003	0.64	0.0	0.04	13.28	0.00	1.953	5.69	0.00	7.8	92.0	0.2	-1.98	0.64	0.66	—	4.4	0.004	0.64	0.0	0.04	13.65	0.00	2.235	7.49	0.00	8.7	91.1	0.2	-1.93	1.26	0.67	0.73	—	46227	2988	12	0	0	0	22914	logfile
✔	8VH2	43232	2024-11-19	2023-12-30	4.31	4.52	4.30	4.5	0.003	0.64	0.0	0.04	13.28	0.00	1.953	5.69	0.00	7.8	92.0	0.2	-1.98	0.64	0.66	—	4.4	0.004	0.64	0.0	0.04	13.65	0.00	2.235	7.49	0.00	8.7	91.1	0.2	-1.93	1.26	0.67	0.73	—	46227	2988	12	0	0	0	22914	logfile
✔	8VH1	43231	2024-10-10	2023-12-30	4.08	4.34	4.10	4.2	0.016	0.96	0.0	0.05	13.54	0.01	1.998	9.24	0.04	10.6	89.1	0.3	-2.16	0.75	0.77	—	4.2	0.004	0.63	0.0	0.04	13.95	0.00	2.371	6.74	0.00	9.8	90.0	0.2	-1.97	0.46	0.77	0.78	—	46047	2988	12	0	0	0	22827	logfile
✔	8VH1	43231	2024-11-18	2023-12-30	4.08	4.34	4.10	4.2	0.016	0.96	0.0	0.05	13.54	0.01	1.998	9.24	0.04	10.6	89.1	0.3	-2.16	0.75	0.77	—	4.2	0.004	0.63	0.0	0.04	13.95	0.00	2.371	6.74	0.00	9.8	90.0	0.2	-1.97	0.46	0.77	0.78	—	46047	2988	12	0	0	0	22827	logfile
✔	8VH0	43230	2025-05-12	2023-12-30	2.3	2.58	2.45	2.6	0.010	0.65	0.0	0.04	17.13	0.00	2.196	18.26	2.37	3.1	96.8	0.2	0.83	0.48	0.83	4.19	2.7	0.011	0.54	0.0	0.04	17.26	0.00	2.148	12.88	2.47	2.5	97.4	0.2	0.94	1.08	0.43	0.81	3.97	9136	1180	6	0	4	8	0	logfile
✔	8XNG	38503	2025-01-17	2023-12-29	3.56	3.95	3.59	3.8	0.008	0.89	0.0	0.05	14.28	0.01	2.146	17.51	0.00	10.2	89.8	0.0	-1.58	0.60	0.75	1.94	3.8	0.003	0.72	0.0	0.04	16.47	0.00	2.495	10.12	1.92	5.8	94.2	0.0	0.22	1.18	0.59	0.73	1.63	10922	1366	2	0	0	0	0	logfile
✔	8XNG	38503	2024-12-29	2023-12-29	3.56	3.95	3.59	3.8	0.008	0.89	0.0	0.05	14.28	0.01	2.146	17.51	0.00	10.2	89.8	0.0	-1.58	0.60	0.75	1.94	3.8	0.003	0.72	0.0	0.04	16.64	0.00	2.534	10.90	2.09	6.0	94.0	0.0	0.21	1.18	0.59	0.73	1.85	10922	1366	2	0	0	0	0	logfile
✔	8XNG	38503	2024-11-16	2023-12-29	3.56	3.95	3.59	3.8	0.008	0.89	0.0	0.05	14.28	0.01	2.146	17.51	0.00	10.2	89.8	0.0	-1.58	0.60	0.75	1.94	3.8	0.003	0.72	0.0	0.04	16.64	0.00	2.534	10.90	2.09	6.0	94.0	0.0	0.21	1.18	0.59	0.73	1.85	10922	1366	2	0	0	0	0	logfile
✔	8XNG	38503	2025-05-13	2023-12-29	3.56	3.95	3.59	3.8	0.008	0.89	0.0	0.05	14.28	0.01	2.146	17.51	0.00	10.2	89.8	0.0	-1.58	0.60	0.75	1.94	3.8	0.003	0.72	0.0	0.04	16.47	0.00	2.495	10.12	1.92	5.8	94.2	0.0	0.22	1.18	0.59	0.73	1.63	10922	1366	2	0	0	0	0	logfile
✔	8XNG	38503	2024-10-11	2023-12-29	3.56	3.95	3.59	3.8	0.008	0.89	0.0	0.05	14.28	0.01	2.146	17.51	0.00	10.2	89.8	0.0	-1.58	0.60	0.75	1.94	3.8	0.003	0.72	0.0	0.04	16.64	0.00	2.534	10.90	2.09	6.0	94.0	0.0	0.21	1.18	0.59	0.73	1.85	10922	1366	2	0	0	0	0	logfile
✔	8XNG	38503	2024-09-25	2023-12-29	3.56	3.95	3.59	3.8	0.008	0.89	0.0	0.05	14.28	0.01	2.146	17.51	0.00	10.2	89.8	0.0	-1.58	0.60	0.75	1.94	3.8	0.003	0.72	0.0	0.04	16.64	0.00	2.534	10.90	2.09	6.0	94.0	0.0	0.21	1.18	0.59	0.73	1.85	10922	1366	2	0	0	0	0	logfile
✔	8XNG	38503	2024-08-04	2023-12-29	3.56	3.95	3.59	3.8	0.008	0.89	0.0	0.05	14.28	0.01	2.146	17.51	0.00	10.2	89.8	0.0	-1.58	0.60	0.75	1.94	3.8	0.003	0.72	0.0	0.04	16.64	0.00	2.534	10.90	2.09	6.0	94.0	0.0	0.21	1.18	0.59	0.73	1.85	10922	1366	2	0	0	0	0	logfile

• ← previous
• Page 450 of 5030
• next →