Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9ASP	43822	2025-07-30	2024-02-26	3.2	4.18	3.27	3.2	0.004	0.62	0.0	0.04	19.27	0.00	2.196	10.51	0.09	5.1	94.9	0.0	0.10	0.77	0.67	1.49	3.2	0.002	0.55	0.0	0.04	19.35	0.00	2.502	6.62	1.52	4.3	95.7	0.0	0.48	1.20	0.83	0.85	1.53	12227	1256	6	96	4	1	0	logfile
✔	9ASP	43822	2025-06-11	2024-02-26	3.2	4.18	3.27	3.2	0.004	0.62	0.0	0.04	19.27	0.00	2.196	10.51	0.09	5.1	94.9	0.0	0.10	0.77	0.67	1.49	3.2	0.002	0.55	0.0	0.04	19.35	0.00	2.502	6.62	1.52	4.3	95.7	0.0	0.48	1.20	0.83	0.85	1.53	12227	1256	6	96	4	1	0	logfile
✔	8YGH	39250	2025-01-18	2024-02-26	2.77	3.71	2.80	3.3	0.003	0.64	0.0	0.04	16.16	0.00	2.230	9.85	1.74	4.3	95.7	0.0	0.53	0.90	0.88	2.42	3.3	0.003	0.61	0.0	0.04	16.45	0.00	2.403	6.91	1.21	4.5	95.5	0.0	0.43	0.30	0.90	0.88	2.26	12244	1510	2	0	0	0	0	logfile
✔	8YGH	39250	2025-05-14	2024-02-26	2.77	3.71	2.80	3.3	0.003	0.64	0.0	0.04	16.16	0.00	2.230	9.85	1.74	4.3	95.7	0.0	0.53	0.90	0.88	2.42	3.3	0.003	0.61	0.0	0.04	16.45	0.00	2.403	6.91	1.21	4.5	95.5	0.0	0.43	0.30	0.90	0.88	2.26	12244	1510	2	0	0	0	0	logfile
✔	9ASN	43820	2024-11-16	2024-02-26	3.2	4.03	3.21	3.2	0.005	0.61	0.0	0.04	17.26	0.00	2.197	6.23	0.00	3.6	96.4	0.0	1.14	0.77	0.69	2.28	3.2	0.004	0.54	0.0	0.04	17.41	0.00	2.262	4.26	0.66	3.4	96.6	0.0	1.54	0.31	0.83	0.86	2.01	11697	1184	6	97	4	2	0	logfile
✔	8YGo	39258	2025-06-12	2024-02-26	3.29	2.47	3.29	2.2	0.004	0.71	0.0	0.04	18.57	0.00	2.118	12.63	0.45	6.9	92.5	0.6	-0.29	0.71	0.68	1.10	2.3	0.005	0.73	0.0	0.04	19.04	0.00	2.498	10.75	3.72	7.8	92.0	0.2	-0.16	0.98	0.73	0.72	1.39	14208	1711	4	0	0	0	0	logfile
✔	9ASN	43820	2024-10-12	2024-02-26	3.2	4.03	3.21	3.2	0.005	0.61	0.0	0.04	17.26	0.00	2.197	6.23	0.00	3.6	96.4	0.0	1.14	0.77	0.69	2.28	3.2	0.004	0.54	0.0	0.04	17.41	0.00	2.262	4.26	0.66	3.4	96.6	0.0	1.54	0.31	0.83	0.86	2.01	11697	1184	6	97	4	2	0	logfile
✘	8YGJ	39253	2025-06-19	2024-02-26	3.2	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	19466	1777	6	241	0	0	0	logfile
✘	8YGJ	39253	2025-05-22	2024-02-26	3.2	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	19466	1777	6	241	0	0	0	logfile
✘	8YGJ	39253	2025-01-25	2024-02-26	3.2	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	19466	1777	6	241	0	0	0	logfile
✔	8YGA	39240	2025-06-28	2024-02-26	4.53	7.03	4.63	4.5	0.004	0.86	0.0	0.05	16.94	0.01	2.059	18.82	0.63	6.9	92.7	0.3	-0.73	0.89	0.73	—	4.5	0.003	0.64	0.0	0.04	14.60	0.00	2.406	12.51	0.00	4.7	95.1	0.2	0.10	7.60	0.89	0.70	—	33140	3980	4	0	0	0	0	logfile
✔	8YGA	39240	2025-05-30	2024-02-26	4.53	7.03	4.63	4.5	0.004	0.86	0.0	0.05	16.94	0.01	2.059	18.82	0.63	6.9	92.7	0.3	-0.73	0.89	0.73	—	4.5	0.002	0.63	0.0	0.04	14.50	0.00	2.396	11.06	0.00	4.8	95.0	0.2	-0.09	7.60	0.89	0.69	—	33140	3980	4	0	0	0	0	logfile
✔	8YGS	39261	2025-07-27	2024-02-26	3.47	2.24	3.47	2.2	0.011	1.50	5.0	0.11	11.76	0.01	2.320	2.13	0.00	5.9	94.0	0.1	-3.41	0.46	0.66	3.05	2.1	0.006	0.77	0.0	0.05	15.12	0.00	2.480	5.64	3.79	5.3	94.7	0.0	-1.60	1.26	0.57	0.79	3.26	9291	1187	7	0	0	0	0	logfile
✔	8YGS	39261	2025-06-08	2024-02-26	3.47	2.24	3.47	2.2	0.011	1.50	5.0	0.11	11.76	0.01	2.320	2.13	0.00	5.9	94.0	0.1	-3.41	0.46	0.66	3.05	2.1	0.006	0.77	0.0	0.05	15.12	0.00	2.480	5.64	3.79	5.3	94.7	0.0	-1.60	1.26	0.57	0.79	3.26	9291	1187	7	0	0	0	0	logfile
✔	8YGS	39261	2025-05-12	2024-02-26	3.47	2.24	3.47	2.2	0.011	1.50	5.0	0.11	11.76	0.01	2.320	2.13	0.00	5.9	94.0	0.1	-3.41	0.46	0.66	3.05	2.1	0.005	0.73	0.0	0.04	14.97	0.00	2.509	5.42	4.47	4.4	95.6	0.0	-1.68	1.24	0.56	0.79	3.41	9291	1187	7	0	0	0	0	logfile
✔	8YGS	39261	2025-04-30	2024-02-26	3.47	2.24	3.47	2.2	0.011	1.50	5.0	0.11	11.76	0.01	2.320	2.13	0.00	5.9	94.0	0.1	-3.41	0.46	0.66	3.05	2.1	0.006	0.77	0.0	0.05	15.12	0.00	2.480	5.64	3.79	5.3	94.7	0.0	-1.60	1.26	0.57	0.79	3.26	9291	1187	7	0	0	0	0	logfile
✔	8YGS	39261	2025-03-14	2024-02-26	3.47	2.24	3.47	2.2	0.011	1.47	5.0	0.11	11.76	0.01	2.320	2.13	0.00	5.9	94.0	0.1	-3.41	0.46	0.66	3.05	2.1	0.006	0.77	0.0	0.05	15.12	0.00	2.480	5.64	3.79	5.3	94.7	0.0	-1.60	1.26	0.57	0.79	3.26	9291	1187	7	0	0	0	0	logfile
✔	8YGC	39243	2025-05-22	2024-02-26	4.03	4.66	4.27	4.3	0.007	0.80	0.0	0.05	17.33	0.00	1.806	19.52	0.63	7.2	91.9	0.9	-1.06	0.86	0.76	—	4.3	0.003	0.69	0.0	0.04	13.72	0.00	2.409	12.12	0.00	5.5	94.1	0.4	0.03	1.31	0.88	0.83	—	23242	2817	6	0	0	0	0	logfile
✔	8YGC	39243	2025-06-20	2024-02-26	4.03	4.66	4.27	4.3	0.007	0.80	0.0	0.05	17.33	0.00	1.806	19.52	0.63	7.2	91.9	0.9	-1.06	0.86	0.76	—	4.3	0.003	0.69	0.0	0.04	13.71	0.00	2.349	12.25	0.00	5.4	94.1	0.5	-0.07	1.03	0.88	0.83	—	23242	2817	6	0	0	0	0	logfile
✔	8YG1	39233	2025-06-18	2024-02-26	3.74	2.55	3.74	2.3	0.003	0.69	0.0	0.04	18.37	0.00	2.134	8.87	0.73	6.0	93.8	0.2	-0.45	0.72	0.73	1.04	2.3	0.003	0.62	0.0	0.04	18.88	0.00	2.408	8.22	3.20	5.5	94.2	0.3	0.12	0.95	0.73	0.74	0.95	21026	2536	4	0	0	0	0	logfile

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