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peach highlight: initial model; blue highlight: re-refined model
Status | PDB code | EMDB code | Date processed | Release Date | Resolution | D99 | DFSC | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | CCbox | CCmask | EMRinger | DModel | Bond rmsd | Angle rmsd | Cβ devts | Chirality | Dihedral rmsd | Plane rmsd | Min nonbonded | Clashscore | Rota outliers | Rama allowed | Rama favored | Rama outliers | Z-score | RMSD | CCbox | CCmask | EMRinger | # atoms | # residues | # chains | # nucleotides | # other | # water | # H | Logfile |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
✔ | 8W0A | 43706 | 2025-07-28 | 2024-02-13 | 3.2 | 3.72 | 3.22 | 3.6 | 0.003 | 0.59 | 0.0 | 0.04 | 19.61 | 0.00 | 1.561 | 10.62 | 0.09 | 8.1 | 91.9 | 0.0 | -1.76 | 0.72 | 0.71 | 1.67 | 3.6 | 0.002 | 0.57 | 0.0 | 0.04 | 19.64 | 0.00 | 2.583 | 8.71 | 4.35 | 7.1 | 92.9 | 0.0 | -1.22 | 0.45 | 0.70 | 0.72 | 0.57 | 10216 | 1272 | 4 | 14 | 0 | 0 | 0 | logfile |
✔ | 8W0A | 43706 | 2025-01-17 | 2024-02-13 | 3.2 | 3.72 | 3.22 | 3.6 | 0.003 | 0.59 | 0.0 | 0.04 | 19.61 | 0.00 | 1.561 | 10.62 | 0.09 | 8.1 | 91.9 | 0.0 | -1.76 | 0.72 | 0.71 | 1.67 | 3.6 | 0.003 | 0.90 | 1.0 | 0.04 | 19.68 | 0.00 | 2.072 | 8.90 | 4.81 | 7.3 | 92.7 | 0.0 | -1.29 | 0.46 | 0.70 | 0.72 | 0.96 | 10216 | 1272 | 4 | 14 | 0 | 0 | 0 | logfile |
✔ | 8RZ8 | 19606 | 2025-06-08 | 2024-02-12 | 3.06 | 2.38 | 3.08 | 3.0 | 0.007 | 1.19 | 0.0 | 0.08 | 16.61 | 0.00 | 1.729 | 17.03 | 2.74 | 6.1 | 93.9 | 0.0 | -1.06 | 0.77 | 0.77 | 1.63 | 2.0 | 0.004 | 0.65 | 0.0 | 0.04 | 17.70 | 0.00 | 1.810 | 12.85 | 3.23 | 4.1 | 95.9 | 0.0 | -0.09 | 0.52 | 0.75 | 0.74 | 1.58 | 9255 | 1160 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8RZ8 | 19606 | 2025-01-16 | 2024-02-12 | 3.06 | 2.38 | 3.08 | 3.0 | 0.007 | 1.19 | 0.0 | 0.08 | 16.61 | 0.00 | 1.729 | 17.03 | 2.74 | 6.1 | 93.9 | 0.0 | -1.06 | 0.77 | 0.77 | 1.63 | 3.0 | 0.005 | 0.68 | 0.0 | 0.04 | 17.70 | 0.00 | 1.793 | 13.21 | 3.23 | 4.2 | 95.8 | 0.0 | -0.22 | 0.52 | 0.75 | 0.74 | 1.67 | 9255 | 1160 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8RZ8 | 19606 | 2025-02-13 | 2024-02-12 | 3.06 | 2.38 | 3.08 | 3.0 | 0.007 | 1.19 | 0.0 | 0.08 | 16.61 | 0.00 | 1.729 | 17.03 | 2.74 | 6.1 | 93.9 | 0.0 | -1.06 | 0.77 | 0.77 | 1.63 | 3.0 | 0.005 | 0.68 | 0.0 | 0.04 | 17.70 | 0.00 | 1.793 | 13.21 | 3.23 | 4.2 | 95.8 | 0.0 | -0.22 | 0.52 | 0.75 | 0.74 | 1.67 | 9255 | 1160 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8RZ8 | 19606 | 2025-03-13 | 2024-02-12 | 3.06 | 2.38 | 3.08 | 3.0 | 0.007 | 1.19 | 0.0 | 0.08 | 16.61 | 0.00 | 1.729 | 17.03 | 2.74 | 6.1 | 93.9 | 0.0 | -1.06 | 0.77 | 0.77 | 1.63 | 2.0 | 0.004 | 0.65 | 0.0 | 0.04 | 17.70 | 0.00 | 1.810 | 12.85 | 3.23 | 4.1 | 95.9 | 0.0 | -0.09 | 0.52 | 0.75 | 0.74 | 1.58 | 9255 | 1160 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8RZ8 | 19606 | 2025-04-30 | 2024-02-12 | 3.06 | 2.38 | 3.08 | 3.0 | 0.007 | 1.19 | 0.0 | 0.08 | 16.61 | 0.00 | 1.729 | 17.03 | 2.74 | 6.1 | 93.9 | 0.0 | -1.06 | 0.77 | 0.77 | 1.63 | 2.0 | 0.004 | 0.65 | 0.0 | 0.04 | 17.70 | 0.00 | 1.810 | 12.85 | 3.23 | 4.1 | 95.9 | 0.0 | -0.09 | 0.52 | 0.75 | 0.74 | 1.58 | 9255 | 1160 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8RZ8 | 19606 | 2025-05-12 | 2024-02-12 | 3.06 | 2.38 | 3.08 | 3.0 | 0.007 | 1.19 | 0.0 | 0.08 | 16.61 | 0.00 | 1.729 | 17.03 | 2.74 | 6.1 | 93.9 | 0.0 | -1.06 | 0.77 | 0.77 | 1.63 | 3.0 | 0.005 | 0.68 | 0.0 | 0.04 | 17.70 | 0.00 | 1.793 | 13.21 | 3.23 | 4.2 | 95.8 | 0.0 | -0.22 | 0.52 | 0.75 | 0.74 | 1.67 | 9255 | 1160 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8RZ8 | 19606 | 2025-07-27 | 2024-02-12 | 3.06 | 2.38 | 3.08 | 3.0 | 0.007 | 1.19 | 0.0 | 0.08 | 16.61 | 0.00 | 1.729 | 17.03 | 2.74 | 6.1 | 93.9 | 0.0 | -1.06 | 0.77 | 0.77 | 1.63 | 2.0 | 0.004 | 0.65 | 0.0 | 0.04 | 17.70 | 0.00 | 1.810 | 12.85 | 3.23 | 4.1 | 95.9 | 0.0 | -0.09 | 0.52 | 0.75 | 0.74 | 1.58 | 9255 | 1160 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8RZ8 | 19606 | 2024-12-28 | 2024-02-12 | 3.06 | 2.38 | 3.08 | 3.0 | 0.007 | 1.19 | 0.0 | 0.08 | 16.61 | 0.00 | 1.729 | 17.03 | 2.74 | 6.1 | 93.9 | 0.0 | -1.06 | 0.77 | 0.77 | 1.63 | 2.0 | 0.003 | 0.66 | 0.0 | 0.04 | 17.68 | 0.00 | 1.845 | 12.24 | 2.64 | 3.9 | 96.1 | 0.0 | -0.06 | 0.53 | 0.76 | 0.75 | 1.62 | 9255 | 1160 | 4 | 0 | 4 | 0 | 0 | logfile |
✔ | 8VZN | 43683 | 2024-11-14 | 2024-02-12 | 2.77 | 2.94 | 2.79 | 2.9 | 0.015 | 1.53 | 0.0 | 0.08 | 15.04 | 0.04 | 2.330 | 3.53 | 2.81 | 4.9 | 95.1 | 0.0 | -3.34 | 0.61 | 0.85 | 3.75 | 2.9 | 0.004 | 0.60 | 0.0 | 0.04 | 15.43 | 0.00 | 2.616 | 4.92 | 1.20 | 2.0 | 98.0 | 0.0 | 1.67 | 0.96 | 0.61 | 0.87 | 3.86 | 4656 | 596 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 8VZN | 43683 | 2024-10-09 | 2024-02-12 | 2.77 | 2.94 | 2.79 | 2.9 | 0.015 | 1.53 | 0.0 | 0.08 | 15.04 | 0.04 | 2.330 | 3.53 | 2.81 | 4.9 | 95.1 | 0.0 | -3.34 | 0.61 | 0.85 | 3.75 | 2.9 | 0.004 | 0.60 | 0.0 | 0.04 | 15.43 | 0.00 | 2.616 | 4.92 | 1.20 | 2.0 | 98.0 | 0.0 | 1.67 | 0.96 | 0.61 | 0.87 | 3.86 | 4656 | 596 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 8VZN | 43683 | 2025-07-23 | 2024-02-12 | 2.77 | 2.94 | 2.78 | 2.9 | 0.015 | 1.53 | 0.0 | 0.08 | 15.04 | 0.04 | 2.330 | 3.53 | 2.81 | 4.9 | 95.1 | 0.0 | -3.34 | 0.61 | 0.85 | 3.75 | 2.9 | 0.003 | 0.59 | 0.0 | 0.04 | 15.27 | 0.00 | 2.619 | 4.82 | 1.20 | 2.2 | 97.8 | 0.0 | 1.74 | 0.97 | 0.61 | 0.87 | 3.24 | 4656 | 596 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 8VZN | 43683 | 2025-06-05 | 2024-02-12 | 2.77 | 2.94 | 2.78 | 2.9 | 0.015 | 1.53 | 0.0 | 0.08 | 15.04 | 0.04 | 2.330 | 3.53 | 2.81 | 4.9 | 95.1 | 0.0 | -3.34 | 0.61 | 0.85 | 3.75 | 2.9 | 0.003 | 0.59 | 0.0 | 0.04 | 15.27 | 0.00 | 2.619 | 4.82 | 1.20 | 2.2 | 97.8 | 0.0 | 1.74 | 0.97 | 0.61 | 0.87 | 3.24 | 4656 | 596 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 8VZN | 43683 | 2025-05-10 | 2024-02-12 | 2.77 | 2.94 | 2.78 | 2.9 | 0.015 | 1.53 | 0.0 | 0.08 | 15.04 | 0.04 | 2.330 | 3.53 | 2.81 | 4.9 | 95.1 | 0.0 | -3.34 | 0.61 | 0.85 | 3.75 | 2.9 | 0.003 | 0.59 | 0.0 | 0.04 | 15.37 | 0.00 | 2.618 | 5.03 | 1.20 | 2.0 | 98.0 | 0.0 | 1.64 | 0.97 | 0.61 | 0.87 | 3.61 | 4656 | 596 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 8VZN | 43683 | 2025-01-14 | 2024-02-12 | 2.77 | 2.94 | 2.79 | 2.9 | 0.015 | 1.53 | 0.0 | 0.08 | 15.04 | 0.04 | 2.330 | 3.53 | 2.81 | 4.9 | 95.1 | 0.0 | -3.34 | 0.61 | 0.85 | 3.75 | 2.9 | 0.003 | 0.61 | 0.0 | 0.04 | 15.32 | 0.00 | 2.532 | 5.14 | 1.20 | 2.0 | 98.0 | 0.0 | 1.83 | 0.97 | 0.61 | 0.87 | 3.71 | 4656 | 596 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 8VZN | 43683 | 2025-02-11 | 2024-02-12 | 2.77 | 2.94 | 2.79 | 2.9 | 0.015 | 1.53 | 0.0 | 0.08 | 15.04 | 0.04 | 2.330 | 3.53 | 2.81 | 4.9 | 95.1 | 0.0 | -3.34 | 0.61 | 0.85 | 3.75 | 2.9 | 0.003 | 0.61 | 0.0 | 0.04 | 15.32 | 0.00 | 2.532 | 5.14 | 1.20 | 2.0 | 98.0 | 0.0 | 1.83 | 0.97 | 0.61 | 0.87 | 3.71 | 4656 | 596 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 8VZN | 43683 | 2025-03-06 | 2024-02-12 | 2.77 | 2.94 | 2.78 | 2.9 | 0.015 | 1.53 | 0.0 | 0.08 | 15.04 | 0.04 | 2.330 | 3.53 | 2.81 | 4.9 | 95.1 | 0.0 | -3.34 | 0.61 | 0.85 | 3.75 | 2.9 | 0.003 | 0.58 | 0.0 | 0.04 | 15.46 | 0.00 | 2.617 | 4.92 | 1.20 | 2.0 | 98.0 | 0.0 | 1.70 | 0.97 | 0.61 | 0.87 | 3.42 | 4656 | 596 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 8VZN | 43683 | 2025-04-27 | 2024-02-12 | 2.77 | 2.94 | 2.78 | 2.9 | 0.015 | 1.53 | 0.0 | 0.08 | 15.04 | 0.04 | 2.330 | 3.53 | 2.81 | 4.9 | 95.1 | 0.0 | -3.34 | 0.61 | 0.85 | 3.75 | 2.9 | 0.003 | 0.59 | 0.0 | 0.04 | 15.27 | 0.00 | 2.619 | 4.82 | 1.20 | 2.2 | 97.8 | 0.0 | 1.74 | 0.97 | 0.61 | 0.87 | 3.24 | 4656 | 596 | 4 | 0 | 1 | 0 | 0 | logfile |
✔ | 8VZN | 43683 | 2024-12-27 | 2024-02-12 | 2.77 | 2.94 | 2.79 | 2.9 | 0.015 | 1.53 | 0.0 | 0.08 | 15.04 | 0.04 | 2.330 | 3.53 | 2.81 | 4.9 | 95.1 | 0.0 | -3.34 | 0.61 | 0.85 | 3.75 | 2.9 | 0.004 | 0.60 | 0.0 | 0.04 | 15.43 | 0.00 | 2.616 | 4.92 | 1.20 | 2.0 | 98.0 | 0.0 | 1.67 | 0.96 | 0.61 | 0.87 | 3.86 | 4656 | 596 | 4 | 0 | 1 | 0 | 0 | logfile |