Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	9DXA	47283	2024-12-31	2024-10-11	3.4	3.75	3.47	3.7	0.009	0.80	0.0	0.04	15.02	0.00	2.281	4.71	0.23	2.4	97.6	0.0	1.98	0.63	0.79	1.86	3.7	0.003	0.56	0.0	0.04	15.45	0.00	2.390	8.30	3.42	2.5	97.5	0.0	2.24	1.31	0.62	0.80	1.16	16291	1880	12	0	18	0	0	logfile
✔	9H1P	51769	2025-01-17	2024-10-10	3.1	3.40	3.10	3.4	0.004	0.67	0.0	0.04	13.91	0.01	2.482	1.72	0.00	0.0	100.0	0.0	-1.00	0.50	0.78	4.07	3.4	0.003	0.47	0.0	0.04	14.86	0.00	2.659	2.51	1.13	0.3	99.7	0.0	1.41	0.42	0.43	0.74	3.09	10668	1332	24	0	0	0	0	logfile
✔	9H1P	51769	2024-12-29	2024-10-10	3.1	3.40	3.10	3.4	0.004	0.67	0.0	0.04	13.91	0.01	2.482	1.72	0.00	0.0	100.0	0.0	-1.00	0.50	0.78	4.07	3.4	0.005	0.87	0.0	0.04	14.91	0.00	2.309	2.33	1.22	0.2	99.8	0.0	1.40	0.43	0.44	0.75	2.96	10668	1332	24	0	0	0	0	logfile
✔	9H1P	51769	2025-02-14	2024-10-10	3.1	3.40	3.10	3.4	0.004	0.67	0.0	0.04	13.91	0.01	2.482	1.72	0.00	0.0	100.0	0.0	-1.00	0.50	0.78	4.07	3.4	0.003	0.47	0.0	0.04	14.86	0.00	2.659	2.51	1.13	0.3	99.7	0.0	1.41	0.42	0.43	0.74	3.09	10668	1332	24	0	0	0	0	logfile
✔	9DX7	47282	2024-12-31	2024-10-10	3.3	3.69	3.41	3.7	0.010	0.79	0.0	0.04	12.83	0.00	2.254	4.50	0.17	2.0	98.0	0.0	1.85	0.63	0.81	2.53	3.7	0.002	0.53	0.0	0.04	15.19	0.00	2.449	7.81	2.69	2.3	97.7	0.0	2.41	1.64	0.60	0.79	1.77	16238	1873	12	0	18	0	0	logfile
✔	9DX7	47282	2025-01-21	2024-10-10	3.3	3.69	3.41	3.7	0.010	0.79	0.0	0.04	12.83	0.00	2.254	4.50	0.17	2.0	98.0	0.0	1.85	0.63	0.81	2.53	3.7	0.003	0.53	0.0	0.04	15.19	0.00	2.456	7.56	3.21	2.6	97.4	0.0	2.28	1.63	0.60	0.79	1.91	16238	1873	12	0	18	0	0	logfile
✘	9DWE	47241	2025-01-21	2024-10-09	2.8	3.10	2.94	3.1	0.005	0.76	0.0	0.05	14.21	0.01	1.485	3.75	0.00	2.8	97.2	0.0	-0.83	0.72	0.87	4.41	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	17400	2187	15	0	21	0	3	logfile
✔	9JVG	61838	2025-03-12	2024-10-09	2.76	3.38	2.79	3.2	0.008	0.79	2.0	0.05	12.56	0.00	1.644	10.65	0.38	5.6	94.4	0.0	-0.72	0.69	0.75	2.63	3.2	0.003	0.67	0.0	0.04	15.99	0.00	2.444	8.35	2.64	2.8	97.2	0.0	0.27	0.61	0.67	0.76	2.50	8396	1151	5	0	0	0	0	logfile
✔	9JVM	61840	2025-03-05	2024-10-09	2.36	2.47	2.27	3.0	0.009	1.11	0.0	0.05	12.65	0.01	2.211	12.67	0.00	11.2	88.4	0.4	-1.75	0.65	0.61	4.04	3.1	0.004	0.85	0.0	0.04	14.34	0.01	2.647	5.76	0.00	5.0	95.0	0.0	1.44	0.90	0.65	0.62	2.37	1800	267	1	0	0	0	0	logfile
✔	9JVH	61839	2025-03-05	2024-10-09	2.76	2.39	2.77	2.8	0.005	0.81	1.0	0.05	12.93	0.00	2.375	8.50	0.00	8.9	91.1	0.0	-1.37	0.71	0.73	4.42	2.9	0.003	0.67	0.0	0.05	15.20	0.00	2.600	7.55	1.46	4.1	95.9	0.0	0.07	0.43	0.73	0.76	2.42	2180	294	1	0	0	0	0	logfile
✔	9DW5	47236	2025-02-14	2024-10-08	3.8	4.25	3.99	4.1	0.005	0.76	0.0	0.04	14.41	0.00	2.012	6.90	2.49	2.8	97.2	0.1	0.83	0.63	0.78	1.61	4.1	0.003	0.64	0.0	0.04	14.90	0.00	1.973	7.18	5.26	3.6	96.4	0.0	0.95	0.74	0.62	0.78	1.36	9748	1464	3	0	3	0	0	logfile
✔	9DW5	47236	2024-12-29	2024-10-08	3.8	4.25	3.99	4.1	0.005	0.76	0.0	0.04	14.41	0.00	2.012	6.90	2.49	2.8	97.2	0.1	0.83	0.63	0.78	1.61	4.1	0.007	0.79	0.0	0.05	15.26	0.00	1.847	9.15	6.14	5.4	94.6	0.0	0.32	0.75	0.63	0.79	1.45	9748	1464	3	0	3	0	0	logfile
✔	9DW5	47236	2025-01-16	2024-10-08	3.8	4.25	3.99	4.1	0.005	0.76	0.0	0.04	14.41	0.00	2.012	6.90	2.49	2.8	97.2	0.1	0.83	0.63	0.78	1.61	4.1	0.003	0.64	0.0	0.04	14.90	0.00	1.973	7.18	5.26	3.6	96.4	0.0	0.95	0.74	0.62	0.78	1.36	9748	1464	3	0	3	0	0	logfile
✔	9DW9	47239	2025-01-18	2024-10-08	2.8	3.05	2.88	3.1	0.004	0.67	1.0	0.04	15.32	0.00	1.931	2.37	1.69	2.2	97.8	0.0	0.50	0.68	0.87	3.80	3.0	0.002	0.49	0.0	0.04	16.47	0.00	2.019	2.53	1.30	2.6	97.4	0.0	1.52	0.31	0.69	0.87	3.11	12332	1511	5	0	19	3	0	logfile
✘	9DW9	47239	2024-12-30	2024-10-08	2.8	3.05	2.88	3.1	0.004	0.67	1.0	0.04	15.32	0.00	1.931	2.37	1.69	2.2	97.8	0.0	0.50	0.68	0.87	3.80	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	12332	1511	5	0	19	3	0	logfile
✔	9DVA	47194	2024-11-19	2024-10-07	3.1	3.30	3.09	3.3	0.003	0.51	0.0	0.04	14.23	0.00	2.077	4.00	0.00	1.2	98.8	0.0	0.25	0.62	0.81	3.20	3.3	0.002	0.57	0.0	0.04	15.80	0.00	2.189	4.36	0.75	1.9	98.1	0.0	0.76	1.09	0.70	0.86	2.37	18529	2354	13	0	10	0	0	logfile
✔	9DVA	47194	2025-01-22	2024-10-07	3.1	3.30	3.09	3.3	0.003	0.51	0.0	0.04	14.23	0.00	2.077	4.00	0.00	1.2	98.8	0.0	0.25	0.62	0.81	3.20	3.3	0.004	0.59	0.0	0.04	15.80	0.00	2.192	4.17	1.45	1.9	98.1	0.0	0.77	1.09	0.70	0.86	2.60	18529	2354	13	0	10	0	0	logfile
✘	9JUB	61826	2025-02-11	2024-10-07	3.1	3.29	3.10	3.4	0.007	0.79	1.0	0.06	11.95	0.01	1.934	17.05	0.56	7.6	92.3	0.1	-1.75	0.55	0.67	3.19	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6479	829	5	0	5	0	0	logfile
✘	9JUB	61826	2025-01-14	2024-10-07	3.1	3.29	3.10	3.4	0.007	0.79	1.0	0.06	11.95	0.01	1.934	17.05	0.56	7.6	92.3	0.1	-1.75	0.55	0.67	3.19	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6479	829	5	0	5	0	0	logfile
✔	9JUB	61826	2025-03-11	2024-10-07	3.1	3.29	3.10	3.3	0.007	0.79	1.0	0.06	11.95	0.01	1.934	17.05	0.56	7.6	92.3	0.1	-1.75	0.55	0.67	3.19	3.3	0.003	0.59	0.0	0.04	13.77	0.00	2.573	5.77	1.95	4.8	95.2	0.0	-0.65	0.58	0.62	0.73	2.62	6479	829	5	0	5	0	0	logfile

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