Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8VYB	43655	2025-06-06	2024-02-07	3.37	3.91	3.30	3.7	0.008	1.05	0.0	0.07	15.54	0.01	2.344	0.00	0.00	5.4	94.6	0.0	-1.28	0.70	0.63	1.89	3.7	0.003	0.67	0.0	0.04	16.94	0.00	2.489	6.71	2.00	3.9	96.1	0.0	0.13	1.21	0.79	0.80	1.92	7249	920	2	0	0	0	0	logfile
✔	8VXT	43639	2025-05-16	2024-02-06	4.25	2.73	4.20	2.2	0.003	0.71	0.0	0.08	14.08	0.01	2.224	7.78	0.00	3.5	96.5	0.0	0.59	0.65	0.63	—	2.0	0.003	0.68	0.0	0.04	14.70	0.00	2.472	10.77	0.00	4.1	95.9	0.0	1.35	0.85	0.67	0.67	—	13896	1740	12	0	6	0	0	logfile
✔	8Y94	39069	2025-06-07	2024-02-06	3.29	3.74	3.42	3.7	0.002	0.46	0.0	0.03	9.27	0.00	2.295	5.05	3.15	2.1	97.9	0.0	-1.50	0.52	0.64	1.26	3.7	0.003	0.69	0.0	0.04	15.22	0.00	2.536	10.76	3.47	2.9	97.1	0.0	0.85	1.15	0.59	0.78	1.00	9032	1130	2	0	0	0	0	logfile
✔	8Y8K	39050	2025-03-12	2024-02-06	2.89	3.09	2.85	3.2	0.003	0.54	0.0	0.04	16.02	0.01	2.248	3.63	2.28	2.5	97.5	0.0	1.68	0.61	0.80	1.21	3.2	0.003	0.50	0.0	0.04	16.50	0.01	2.614	3.21	3.53	2.5	97.5	0.0	2.11	0.26	0.56	0.78	1.29	8052	1028	2	0	0	0	0	logfile
✔	8Y8K	39050	2025-01-15	2024-02-06	2.89	3.09	2.92	3.2	0.003	0.54	0.0	0.04	16.02	0.01	2.248	3.63	2.28	2.5	97.5	0.0	1.68	0.61	0.80	1.21	3.2	0.003	0.49	0.0	0.04	16.56	0.01	2.614	2.78	2.85	2.4	97.6	0.0	2.06	0.26	0.57	0.79	1.24	8052	1028	2	0	0	0	0	logfile
✔	8Y94	39069	2025-05-12	2024-02-06	3.29	3.74	3.42	3.7	0.002	0.46	0.0	0.03	9.27	0.00	2.295	5.05	3.15	2.1	97.9	0.0	-1.50	0.52	0.64	1.26	3.7	0.003	0.67	0.0	0.04	15.25	0.00	2.533	10.26	2.94	2.9	97.1	0.0	0.96	1.15	0.59	0.78	1.00	9032	1130	2	0	0	0	0	logfile
✔	8Y8K	39050	2025-06-06	2024-02-06	2.89	3.09	2.85	3.2	0.003	0.54	0.0	0.04	16.02	0.01	2.248	3.63	2.28	2.5	97.5	0.0	1.68	0.61	0.80	1.21	3.2	0.003	0.50	0.0	0.04	16.50	0.01	2.614	3.21	3.53	2.5	97.5	0.0	2.11	0.26	0.56	0.78	1.29	8052	1028	2	0	0	0	0	logfile
✔	8Y88	39037	2025-06-27	2024-02-06	3.03	2.43	3.03	2.2	0.002	0.42	0.0	0.04	7.75	0.00	2.210	4.18	1.72	3.8	96.2	0.0	-3.28	0.75	0.76	3.28	2.1	0.005	0.82	3.0	0.05	12.60	0.01	2.399	5.46	2.97	6.7	93.3	0.0	-0.98	0.53	0.77	0.82	2.89	31257	4031	12	0	27	0	0	logfile
✔	8Y8K	39050	2025-07-25	2024-02-06	2.89	3.09	2.85	3.2	0.003	0.54	0.0	0.04	16.02	0.01	2.248	3.63	2.28	2.5	97.5	0.0	1.68	0.61	0.80	1.21	3.2	0.003	0.50	0.0	0.04	16.50	0.01	2.614	3.21	3.53	2.5	97.5	0.0	2.11	0.26	0.56	0.78	1.29	8052	1028	2	0	0	0	0	logfile
✔	8Y8K	39050	2024-10-10	2024-02-06	2.89	3.09	2.92	3.2	0.003	0.54	0.0	0.04	16.02	0.01	2.248	3.63	2.28	2.5	97.5	0.0	1.68	0.61	0.80	1.21	3.1	0.004	0.54	0.0	0.04	16.48	0.01	2.612	3.08	2.62	2.5	97.5	0.0	1.91	0.31	0.57	0.79	1.38	8052	1028	2	0	0	0	0	logfile
✔	8Y8K	39050	2024-11-15	2024-02-06	2.89	3.09	2.92	3.2	0.003	0.54	0.0	0.04	16.02	0.01	2.248	3.63	2.28	2.5	97.5	0.0	1.68	0.61	0.80	1.21	3.1	0.004	0.54	0.0	0.04	16.48	0.01	2.612	3.08	2.62	2.5	97.5	0.0	1.91	0.31	0.57	0.79	1.38	8052	1028	2	0	0	0	0	logfile
✔	8Y8E	39043	2025-06-23	2024-02-06	3.62	2.58	3.68	1.8	0.002	0.43	0.0	0.04	8.47	0.00	2.211	6.06	2.45	5.7	94.3	0.0	-3.40	0.67	0.60	1.08	1.7	0.003	0.69	0.0	0.05	12.48	0.00	2.503	9.18	2.98	10.1	89.9	0.0	-2.37	1.01	0.69	0.64	0.95	26640	3538	6	0	16	0	0	logfile
✔	8VXT	43639	2025-06-12	2024-02-06	4.25	2.73	4.20	2.2	0.003	0.71	0.0	0.08	14.08	0.01	2.224	7.78	0.00	3.5	96.5	0.0	0.59	0.65	0.63	—	2.0	0.003	0.68	0.0	0.04	14.79	0.00	2.376	11.42	0.00	3.9	96.1	0.0	1.50	0.86	0.67	0.67	—	13896	1740	12	0	6	0	0	logfile
✔	8Y8K	39050	2025-02-12	2024-02-06	2.89	3.09	2.92	3.2	0.003	0.54	0.0	0.04	16.02	0.01	2.248	3.63	2.28	2.5	97.5	0.0	1.68	0.61	0.80	1.21	3.2	0.003	0.49	0.0	0.04	16.56	0.01	2.614	2.78	2.85	2.4	97.6	0.0	2.06	0.26	0.57	0.79	1.24	8052	1028	2	0	0	0	0	logfile
✔	8Y8K	39050	2024-12-28	2024-02-06	2.89	3.09	2.92	3.2	0.003	0.54	0.0	0.04	16.02	0.01	2.248	3.63	2.28	2.5	97.5	0.0	1.68	0.61	0.80	1.21	3.1	0.004	0.54	0.0	0.04	16.48	0.01	2.612	3.08	2.62	2.5	97.5	0.0	1.91	0.31	0.57	0.79	1.38	8052	1028	2	0	0	0	0	logfile
✔	8Y95	39070	2025-01-16	2024-02-06	3.24	3.62	3.40	3.6	0.003	0.59	0.0	0.04	11.30	0.01	1.402	11.16	4.43	5.0	95.0	0.0	-1.89	0.50	0.65	1.63	3.6	0.003	0.62	0.0	0.04	14.90	0.00	2.328	10.84	3.27	3.1	96.9	0.0	0.73	1.10	0.56	0.78	2.52	9018	1124	4	0	6	0	0	logfile
✔	8VXT	43639	2024-12-30	2024-02-06	4.25	2.73	4.22	2.2	0.003	0.71	0.0	0.08	14.08	0.01	2.224	7.78	0.00	3.5	96.5	0.0	0.59	0.65	0.63	—	2.0	0.003	0.70	0.0	0.04	14.63	0.00	2.389	11.89	0.00	4.4	95.6	0.0	1.58	0.84	0.67	0.67	—	13896	1740	12	0	6	0	0	logfile
✔	8Y8K	39050	2025-05-11	2024-02-06	2.89	3.09	2.85	3.2	0.003	0.54	0.0	0.04	16.02	0.01	2.248	3.63	2.28	2.5	97.5	0.0	1.68	0.61	0.80	1.21	3.2	0.003	0.49	0.0	0.04	16.56	0.01	2.614	2.78	2.85	2.4	97.6	0.0	2.06	0.26	0.57	0.79	1.24	8052	1028	2	0	0	0	0	logfile
✔	8Y94	39069	2025-04-29	2024-02-06	3.29	3.74	3.42	3.7	0.002	0.46	0.0	0.03	9.27	0.00	2.295	5.05	3.15	2.1	97.9	0.0	-1.50	0.52	0.64	1.26	3.7	0.003	0.69	0.0	0.04	15.22	0.00	2.536	10.76	3.47	2.9	97.1	0.0	0.85	1.15	0.59	0.78	1.00	9032	1130	2	0	0	0	0	logfile
✔	8Y8K	39050	2025-04-28	2024-02-06	2.89	3.09	2.85	3.2	0.003	0.54	0.0	0.04	16.02	0.01	2.248	3.63	2.28	2.5	97.5	0.0	1.68	0.61	0.80	1.21	3.2	0.003	0.50	0.0	0.04	16.50	0.01	2.614	3.21	3.53	2.5	97.5	0.0	2.11	0.26	0.56	0.78	1.29	8052	1028	2	0	0	0	0	logfile

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