Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

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Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8Y90	39065	2025-07-27	2024-02-06	3.15	3.57	3.32	3.5	0.003	0.57	0.0	0.03	11.77	0.00	2.167	8.97	6.09	2.7	97.3	0.0	-1.83	0.50	0.63	1.25	3.5	0.003	0.68	0.0	0.04	15.08	0.00	2.328	11.30	3.89	4.5	95.5	0.0	0.58	1.19	0.60	0.78	1.41	9058	1130	3	0	3	5	0	logfile
✔	8Y91	39066	2024-11-15	2024-02-06	3.13	3.47	3.24	3.4	0.004	0.55	0.0	0.04	11.48	0.00	1.938	9.24	5.04	4.4	95.6	0.0	-1.65	0.48	0.65	1.57	3.4	0.004	0.67	0.0	0.04	15.03	0.00	2.228	7.52	3.78	4.6	95.4	0.0	0.81	1.46	0.65	0.82	2.33	9072	1130	4	0	6	0	0	logfile
✔	8Y91	39066	2024-10-11	2024-02-06	3.13	3.47	3.24	3.4	0.004	0.55	0.0	0.04	11.48	0.00	1.938	9.24	5.04	4.4	95.6	0.0	-1.65	0.48	0.65	1.57	3.4	0.004	0.67	0.0	0.04	15.03	0.00	2.228	7.52	3.78	4.6	95.4	0.0	0.81	1.46	0.65	0.82	2.33	9072	1130	4	0	6	0	0	logfile
✔	8Y91	39066	2025-04-30	2024-02-06	3.13	3.47	3.23	3.4	0.004	0.55	0.0	0.04	11.48	0.00	1.938	9.24	5.04	4.4	95.6	0.0	-1.65	0.48	0.65	1.57	3.4	0.003	0.66	0.0	0.04	14.93	0.00	2.235	8.02	4.10	4.5	95.5	0.0	0.68	1.44	0.65	0.82	2.34	9072	1130	4	0	6	0	0	logfile
✔	8Y91	39066	2025-03-13	2024-02-06	3.13	3.47	3.23	3.4	0.004	0.55	0.0	0.04	11.48	0.00	1.938	9.24	5.04	4.4	95.6	0.0	-1.65	0.48	0.65	1.57	3.4	0.003	0.66	0.0	0.04	14.93	0.00	2.235	8.02	4.10	4.5	95.5	0.0	0.68	1.44	0.65	0.82	2.34	9072	1130	4	0	6	0	0	logfile
✔	8Y90	39065	2025-06-07	2024-02-06	3.15	3.57	3.32	3.5	0.003	0.57	0.0	0.03	11.77	0.00	2.167	8.97	6.09	2.7	97.3	0.0	-1.83	0.50	0.63	1.25	3.5	0.003	0.68	0.0	0.04	15.08	0.00	2.328	11.30	3.89	4.5	95.5	0.0	0.58	1.19	0.60	0.78	1.41	9058	1130	3	0	3	5	0	logfile
✔	8Y90	39065	2025-05-12	2024-02-06	3.15	3.57	3.32	3.5	0.003	0.57	0.0	0.03	11.77	0.00	2.167	8.97	6.09	2.7	97.3	0.0	-1.83	0.50	0.63	1.25	3.5	0.003	0.69	0.0	0.04	14.90	0.00	2.328	11.35	3.68	3.6	96.4	0.0	0.53	1.19	0.59	0.78	1.34	9058	1130	3	0	3	5	0	logfile
✔	8Y90	39065	2025-04-29	2024-02-06	3.15	3.57	3.32	3.5	0.003	0.57	0.0	0.03	11.77	0.00	2.167	8.97	6.09	2.7	97.3	0.0	-1.83	0.50	0.63	1.25	3.5	0.003	0.68	0.0	0.04	15.08	0.00	2.328	11.30	3.89	4.5	95.5	0.0	0.58	1.19	0.60	0.78	1.41	9058	1130	3	0	3	5	0	logfile
✔	8Y90	39065	2025-03-13	2024-02-06	3.15	3.57	3.32	3.5	0.003	0.57	0.0	0.03	11.77	0.00	2.167	8.97	6.09	2.7	97.3	0.0	-1.83	0.50	0.63	1.25	3.5	0.003	0.68	0.0	0.04	15.08	0.00	2.328	11.30	3.89	4.5	95.5	0.0	0.58	1.19	0.60	0.78	1.41	9058	1130	3	0	3	5	0	logfile
✔	8Y90	39065	2025-02-13	2024-02-06	3.15	3.57	3.32	3.5	0.003	0.57	0.0	0.03	11.77	0.00	2.167	8.97	6.09	2.7	97.3	0.0	-1.83	0.50	0.63	1.25	3.5	0.003	0.69	0.0	0.04	14.90	0.00	2.328	11.35	3.68	3.6	96.4	0.0	0.53	1.19	0.59	0.78	1.34	9058	1130	3	0	3	5	0	logfile
✔	8Y90	39065	2025-01-16	2024-02-06	3.15	3.57	3.32	3.5	0.003	0.57	0.0	0.03	11.77	0.00	2.167	8.97	6.09	2.7	97.3	0.0	-1.83	0.50	0.63	1.25	3.5	0.003	0.69	0.0	0.04	14.90	0.00	2.328	11.35	3.68	3.6	96.4	0.0	0.53	1.19	0.59	0.78	1.34	9058	1130	3	0	3	5	0	logfile
✘	8Y91	39066	2025-02-13	2024-02-06	3.13	3.47	3.24	3.4	0.004	0.55	0.0	0.04	11.48	0.00	1.938	9.24	5.04	4.4	95.6	0.0	-1.65	0.48	0.65	1.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9072	1130	4	0	6	0	0	logfile
✘	8Y91	39066	2025-01-16	2024-02-06	3.13	3.47	3.24	3.4	0.004	0.55	0.0	0.04	11.48	0.00	1.938	9.24	5.04	4.4	95.6	0.0	-1.65	0.48	0.65	1.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	9072	1130	4	0	6	0	0	logfile
✔	8Y9E	39075	2025-06-11	2024-02-06	2.95	3.10	2.96	3.1	0.010	0.66	0.0	0.05	12.36	0.00	2.128	7.30	0.56	5.0	95.0	0.0	-3.86	0.67	0.79	4.19	3.1	0.003	0.58	0.0	0.04	15.37	0.00	2.600	8.39	2.32	2.6	97.4	0.0	-0.05	0.48	0.64	0.79	3.54	13076	1640	4	0	0	0	0	logfile
✘	8Y8R	39056	2025-06-20	2024-02-06	3.39	3.60	3.30	3.6	0.025	0.66	0.0	0.04	15.54	0.00	0.000	11.10	1.94	3.8	95.8	0.4	-1.54	0.73	0.87	3.73	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	24528	3204	24	0	12	0	0	logfile
✘	8Y8R	39056	2025-05-23	2024-02-06	3.39	3.60	3.30	3.6	0.025	0.66	0.0	0.04	15.54	0.00	0.000	11.10	1.94	3.8	95.8	0.4	-1.54	0.73	0.87	3.73	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	24528	3204	24	0	12	0	0	logfile
✔	8Y9E	39075	2025-07-30	2024-02-06	2.95	3.10	2.96	3.1	0.010	0.66	0.0	0.05	12.36	0.00	2.128	7.30	0.56	5.0	95.0	0.0	-3.86	0.67	0.79	4.19	3.1	0.003	0.58	0.0	0.04	15.37	0.00	2.600	8.39	2.32	2.6	97.4	0.0	-0.05	0.48	0.64	0.79	3.54	13076	1640	4	0	0	0	0	logfile
✔	8Y9E	39075	2025-05-15	2024-02-06	2.95	3.10	2.96	3.1	0.010	0.66	0.0	0.05	12.36	0.00	2.128	7.30	0.56	5.0	95.0	0.0	-3.86	0.67	0.79	4.19	3.1	0.004	0.61	0.0	0.04	15.44	0.00	2.599	8.35	2.39	2.3	97.7	0.0	-0.19	0.47	0.64	0.80	3.54	13076	1640	4	0	0	0	0	logfile
✘	8Y8J	39048	2025-07-24	2024-02-06	3.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	5069	608	10	0	18	0	0	logfile
✘	8Y8J	39048	2024-12-27	2024-02-06	3.57	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	5069	608	10	0	18	0	0	logfile

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