Table showing results for all available months

The table shows a selection of parameters. Activate more columns using the drop-down menus below.
peach highlight: initial model; blue highlight: re-refined model

Resolution

• Resolution
• D₉₉
• D_FSC
• D_Model
• D_Model refined

Map vs model

• CC_box
• CC_mask
• EMRinger
• CC_box refined
• CC_mask refined
• EMRinger refined

Geometry

• Bond rmsd
• Angle rmsd
• Cβ devts
• Chirality
• Dihedral rmsd
• Plane rmsd
• Min nonbonded
• Clashscore
• Rota outliers
• Bond rmsd refined
• Angle rmsd refined
• Cβ devts refined
• Chirality refined
• Dihedral rmsd refined
• Plane rmsd refined
• Min nonbonded refined
• Clashscore refined
• Rota outliers refined
• RMSD

Ramachandran

• Rama allowed
• Rama favored
• Rama outliers
• Z-score
• Rama allowed refined
• Rama favored refined
• Rama outliers refined
• Z-score refined

Composition

• # atoms
• # residues
• # chains
• # nucleotides
• # other
• # water
• # H

Other

• Date processed
• Release Date

Table content is loading...

Status	PDB code	EMDB code	Date processed	Release Date	Resolution	D99	DFSC	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	CCbox	CCmask	EMRinger	DModel	Bond rmsd	Angle rmsd	Cβ devts	Chirality	Dihedral rmsd	Plane rmsd	Min nonbonded	Clashscore	Rota outliers	Rama allowed	Rama favored	Rama outliers	Z-score	RMSD	CCbox	CCmask	EMRinger	# atoms	# residues	# chains	# nucleotides	# other	# water	# H	Logfile
✔	8RL6	19332	2025-08-22	2024-01-02	3.18	2.29	3.42	2.9	0.003	0.55	0.0	0.04	13.54	0.00	2.207	9.09	0.00	1.4	98.6	0.0	1.86	0.61	0.58	1.43	1.7	0.004	0.67	0.0	0.04	15.88	0.00	2.242	13.25	1.50	5.6	94.4	0.0	0.22	0.97	0.62	0.62	1.55	6493	436	2	0	1	0	3217	logfile
✔	8RLD	19339	2025-02-11	2024-01-02	2.84	2.96	2.86	3.1	0.003	0.59	0.0	0.04	12.39	0.00	1.981	7.12	0.00	1.2	98.8	0.0	1.29	0.45	0.58	1.50	3.0	0.004	0.60	0.0	0.04	15.26	0.01	2.345	7.59	0.91	3.1	96.9	0.0	1.51	0.68	0.49	0.63	2.23	6416	422	2	0	1	0	3209	logfile
✔	8RLD	19339	2025-03-11	2024-01-02	2.84	2.96	2.86	3.1	0.003	0.59	0.0	0.04	12.39	0.00	1.981	7.12	0.00	1.2	98.8	0.0	1.29	0.45	0.58	1.50	3.0	0.004	0.58	0.0	0.04	15.43	0.00	2.337	7.43	2.13	3.4	96.6	0.0	1.32	0.70	0.50	0.64	2.35	6416	422	2	0	1	0	3209	logfile
✔	8RLD	19339	2025-04-27	2024-01-02	2.84	2.96	2.86	3.1	0.003	0.59	0.0	0.04	12.39	0.00	1.981	7.12	0.00	1.2	98.8	0.0	1.29	0.45	0.58	1.50	3.0	0.004	0.58	0.0	0.04	15.43	0.00	2.337	7.43	2.13	3.4	96.6	0.0	1.32	0.70	0.50	0.64	2.35	6416	422	2	0	1	0	3209	logfile
✔	8RLD	19339	2025-05-10	2024-01-02	2.84	2.96	2.86	3.1	0.003	0.59	0.0	0.04	12.39	0.00	1.981	7.12	0.00	1.2	98.8	0.0	1.29	0.45	0.58	1.50	3.0	0.004	0.60	0.0	0.04	15.26	0.01	2.345	7.59	0.91	3.1	96.9	0.0	1.51	0.68	0.49	0.63	2.23	6416	422	2	0	1	0	3209	logfile
✔	8RLD	19339	2025-06-05	2024-01-02	2.84	2.96	2.86	3.1	0.003	0.59	0.0	0.04	12.39	0.00	1.981	7.12	0.00	1.2	98.8	0.0	1.29	0.45	0.58	1.50	3.0	0.004	0.58	0.0	0.04	15.43	0.00	2.337	7.43	2.13	3.4	96.6	0.0	1.32	0.70	0.50	0.64	2.35	6416	422	2	0	1	0	3209	logfile
✔	8RLD	19339	2025-07-24	2024-01-02	2.84	2.96	2.86	3.1	0.003	0.59	0.0	0.04	12.39	0.00	1.981	7.12	0.00	1.2	98.8	0.0	1.29	0.45	0.58	1.50	3.0	0.004	0.58	0.0	0.04	15.43	0.00	2.337	7.43	2.13	3.4	96.6	0.0	1.32	0.70	0.50	0.64	2.35	6416	422	2	0	1	0	3209	logfile
✘	8RL6	19332	2025-07-24	2024-01-02	3.18	2.29	3.42	2.9	0.003	0.55	0.0	0.04	13.54	0.00	2.207	9.09	0.00	1.4	98.6	0.0	1.86	0.61	0.58	1.43	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6493	436	2	0	1	0	3217	logfile
✔	8RLD	19339	2025-08-22	2024-01-02	2.84	2.96	2.86	3.1	0.003	0.59	0.0	0.04	12.39	0.00	1.981	7.12	0.00	1.2	98.8	0.0	1.29	0.45	0.58	1.50	3.0	0.003	0.54	0.0	0.04	15.25	0.00	2.421	6.19	1.52	2.9	97.1	0.0	2.40	0.66	0.47	0.62	2.03	6416	422	2	0	1	0	3209	logfile
✘	8RL6	19332	2025-06-05	2024-01-02	3.18	2.29	3.42	2.9	0.003	0.55	0.0	0.04	13.54	0.00	2.207	9.09	0.00	1.4	98.6	0.0	1.86	0.61	0.58	1.43	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6493	436	2	0	1	0	3217	logfile
✘	8RL6	19332	2025-04-27	2024-01-02	3.18	2.29	3.42	2.9	0.003	0.55	0.0	0.04	13.54	0.00	2.207	9.09	0.00	1.4	98.6	0.0	1.86	0.61	0.58	1.43	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	—	6493	436	2	0	1	0	3217	logfile
✔	8RL6	19332	2025-03-11	2024-01-02	3.18	2.29	3.42	2.9	0.002	0.49	0.0	0.04	13.54	0.00	2.207	9.09	0.00	1.4	98.6	0.0	1.86	0.61	0.58	1.43	1.8	0.004	0.60	0.0	0.04	15.84	0.00	2.257	12.32	1.50	4.4	95.6	0.0	0.50	0.65	0.62	0.61	1.75	6493	436	2	0	1	0	3217	logfile
✔	8VHT	43241	2025-05-18	2024-01-02	3.2	3.09	2.92	3.2	0.003	0.54	0.0	0.04	15.27	0.00	2.215	4.91	0.00	2.9	97.1	0.0	1.23	0.71	0.84	2.17	3.1	0.004	0.60	0.0	0.04	15.58	0.00	2.516	5.40	2.80	2.5	97.5	0.0	1.95	0.38	0.74	0.88	2.59	16581	2055	6	0	6	0	0	logfile
✔	8VHT	43241	2025-06-14	2024-01-02	3.2	3.09	2.92	3.2	0.003	0.54	0.0	0.04	15.27	0.00	2.215	4.91	0.00	2.9	97.1	0.0	1.23	0.71	0.84	2.17	3.1	0.003	0.57	0.0	0.04	15.63	0.00	2.528	5.09	2.91	2.4	97.6	0.0	1.94	0.38	0.74	0.87	2.51	16581	2055	6	0	6	0	0	logfile
✔	8RL6	19332	2025-02-11	2024-01-02	3.18	2.29	3.43	2.9	0.002	0.49	0.0	0.04	13.54	0.00	2.207	9.09	0.00	1.4	98.6	0.0	1.86	0.61	0.58	1.43	1.8	0.003	0.61	0.0	0.04	15.78	0.00	2.261	13.71	1.80	4.9	95.1	0.0	-0.03	0.65	0.62	0.61	1.65	6493	436	2	0	1	0	3217	logfile
✔	8VHT	43241	2025-08-24	2024-01-02	3.2	3.09	2.92	3.2	0.003	0.54	0.0	0.04	15.27	0.00	2.215	4.91	0.00	2.9	97.1	0.0	1.23	0.71	0.84	2.17	3.1	0.004	0.62	0.0	0.04	15.62	0.00	2.450	5.67	2.97	2.3	97.7	0.0	1.65	0.40	0.74	0.88	2.59	16581	2055	6	0	6	0	0	logfile
✔	8RL8	19334	2025-07-24	2024-01-02	2.79	2.21	2.86	2.9	0.003	0.59	0.0	0.04	12.36	0.00	2.172	7.53	0.00	1.2	98.8	0.0	1.43	0.65	0.72	2.63	2.8	0.004	0.57	0.0	0.04	15.29	0.00	2.431	7.84	2.41	1.4	98.6	0.0	2.48	1.02	0.67	0.74	3.17	6469	421	2	0	1	0	3252	logfile
✔	8RL8	19334	2025-06-05	2024-01-02	2.79	2.21	2.86	2.9	0.003	0.59	0.0	0.04	12.36	0.00	2.172	7.53	0.00	1.2	98.8	0.0	1.43	0.65	0.72	2.63	2.8	0.004	0.57	0.0	0.04	15.29	0.00	2.431	7.84	2.41	1.4	98.6	0.0	2.48	1.02	0.67	0.74	3.17	6469	421	2	0	1	0	3252	logfile
✔	8RL8	19334	2025-05-10	2024-01-02	2.79	2.21	2.86	2.9	0.003	0.59	0.0	0.04	12.36	0.00	2.172	7.53	0.00	1.2	98.8	0.0	1.43	0.65	0.72	2.63	2.8	0.004	0.57	0.0	0.04	15.23	0.00	2.429	7.68	3.01	1.4	98.6	0.0	2.49	1.02	0.67	0.74	3.17	6469	421	2	0	1	0	3252	logfile
✔	8Vi0	43245	2025-08-24	2024-01-02	3.0	3.40	3.02	3.3	0.002	0.50	0.0	0.04	15.05	0.00	2.166	6.78	1.45	2.3	97.7	0.0	1.59	0.75	0.84	2.23	3.3	0.003	0.57	0.0	0.04	15.95	0.00	2.424	6.21	3.11	2.7	97.3	0.0	1.45	0.34	0.63	0.78	2.37	17454	2171	6	0	9	0	0	logfile

• ← previous
• Page 763 of 5400
• next →